3NTA - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF THE SHEWANELLA LOIHICA PV-4 NADH-DEPENDENT PERS REDUCTASE
• Keywords: COA, FAD, PERSULFIDE REDUCTASE, SULFUR METABOLISM, OXIDOREDU
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3NTA	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FAD-DEPENDENT PYRIDINE NUCLEOTIDE-DISULPHIDE OXIDOREDUCTASE	A	565	4167	128
2	Protein	FAD-DEPENDENT PYRIDINE NUCLEOTIDE-DISULPHIDE OXIDOREDUCTASE	B	565	4169	125
3	Ligand	FAD-DEPENDENT PYRIDINE NUCLEOTIDE-DISULPHIDE OXIDOREDUCTASE	A	3	0	102
4	Ligand	FAD-DEPENDENT PYRIDINE NUCLEOTIDE-DISULPHIDE OXIDOREDUCTASE	B	3	0	102
5	Water			545	0	545
total				1681	8336	1002

Proteins

Unit 1

MSE 1 LYS 2 LYS 3 ILE 4 LEU 5 ILE 6 ILE 7 GLY 8 GLY 9 VAL 10 ALA 11 GLY 12 GLY 13 ALA 14 SER 15 ALA 16 ALA 17 ALA 18 ARG 19 ALA 20 ARG 21 ARG 22 LEU 23 SER 24 GLU 25 THR 26 ALA 27 GLU 28 ILE 29 ILE 30 MSE 31 PHE 32 GLU 33 ARG 34 GLY 35 GLU 36 TYR 37 VAL 38 SER 39 PHE 40 ALA 41 ASN 42 CYS 43 GLY 44 LEU 45 PRO 46 TYR 47 HIS 48 ILE 49 SER 50 GLY 51 GLU 52 ILE 53 ALA 54 GLN 55 ARG 56 SER 57 ALA 58 LEU 59 VAL 60 LEU 61 GLN 62 THR 63 PRO 64 GLU 65 SER 66 PHE 67 LYS 68 ALA 69 ARG 70 PHE 71 ASN 72 VAL 73 GLU 74 VAL 75 ARG 76 VAL 77 LYS 78 HIS 79 GLU 80 VAL 81 VAL 82 ALA 83 ILE 84 ASP 85 ARG 86 ALA 87 ALA 88 LYS 89 LEU 90 VAL 91 THR 92 VAL 93 ARG 94 ARG 95 LEU 96 LEU 97 ASP 98 GLY 99 SER 100 GLU 101 TYR 102 GLN 103 GLU 104 SER 105 TYR 106 ASP 107 THR 108 LEU 109 LEU 110 LEU 111 SER 112 PRO 113 GLY 114 ALA 115 ALA 116 PRO 117 ILE 118 VAL 119 PRO 120 PRO 121 ILE 122 PRO 123 GLY 124 VAL 125 ASP 126 ASN 127 PRO 128 LEU 129 THR 130 HIS 131 SER 132 LEU 133 ARG 134 ASN 135 ILE 136 PRO 137 ASP 138 MSE 139 ASP 140 ARG 141 ILE 142 LEU 143 GLN 144 THR 145 ILE 146 GLN 147 MSE 148 ASN 149 ASN 150 VAL 151 GLU 152 HIS 153 ALA 154 THR 155 VAL 156 VAL 157 GLY 158 GLY 159 GLY 160 PHE 161 ILE 162 GLY 163 LEU 164 GLU 165 MSE 166 MSE 167 GLU 168 SER 169 LEU 170 HIS 171 HIS 172 LEU 173 GLY 174 ILE 175 LYS 176 THR 177 THR 178 LEU 179 LEU 180 GLU 181 LEU 182 ALA 183 ASP 184 GLN 185 VAL 186 MSE 187 THR 188 PRO 189 VAL 190 ASP 191 ARG 192 GLU 193 MSE 194 ALA 195 GLY 196 PHE 197 ALA 198 HIS 199 GLN 200 ALA 201 ILE 202 ARG 203 ASP 204 GLN 205 GLY 206 VAL 207 ASP 208 LEU 209 ARG 210 LEU 211 GLY 212 THR 213 ALA 214 LEU 215 SER 216 GLU 217 VAL 218 SER 219 TYR 220 GLN 221 VAL 222 GLN 223 THR 224 HIS 225 VAL 226 ALA 227 SER 228 ASP 229 ALA 230 ALA 231 GLY 232 GLU 233 ASP 234 THR 235 ALA 236 HIS 237 GLN 238 HIS 239 ILE 240 LYS 241 GLY 242 HIS 243 LEU 244 SER 245 LEU 246 THR 247 LEU 248 SER 249 ASN 250 GLY 251 GLU 252 LEU 253 LEU 254 GLU 255 THR 256 ASP 257 LEU 258 LEU 259 ILE 260 MSE 261 ALA 262 ILE 263 GLY 264 VAL 265 ARG 266 PRO 267 GLU 268 THR 269 GLN 270 LEU 271 ALA 272 ARG 273 ASP 274 ALA 275 GLY 276 LEU 277 ALA 278 ILE 279 GLY 280 GLU 281 LEU 282 GLY 283 GLY 284 ILE 285 LYS 286 VAL 287 ASN 288 ALA 289 MSE 290 MSE 291 GLN 292 THR 293 SER 294 ASP 295 PRO 296 ALA 297 ILE 298 TYR 299 ALA 300 VAL 301 GLY 302 ASP 303 ALA 304 VAL 305 GLU 306 GLU 307 GLN 308 ASP 309 PHE 310 VAL 311 THR 312 GLY 313 GLN 314 ALA 315 CYS 316 LEU 317 VAL 318 PRO 319 LEU 320 ALA 321 GLY 322 PRO 323 ALA 324 ASN 325 ARG 326 GLN 327 GLY 328 ARG 329 MSE 330 ALA 331 ALA 332 ASP 333 ASN 334 MSE 335 PHE 336 GLY 337 ARG 338 GLU 339 GLU 340 ARG 341 TYR 342 GLN 343 GLY 344 THR 345 GLN 346 GLY 347 THR 348 ALA 349 ILE 350 CYS 351 LYS 352 VAL 353 PHE 354 ASP 355 LEU 356 ALA 357 VAL 358 GLY 359 ALA 360 THR 361 GLY 362 LYS 363 ASN 364 GLU 365 LYS 366 GLN 367 LEU 368 LYS 369 GLN 370 ALA 371 GLY 372 ILE 373 ALA 374 PHE 375 GLU 376 LYS 377 VAL 378 TYR 379 VAL 380 HIS 381 THR 382 ALA 383 SER 384 HIS 385 ALA 386 SER 387 TYR 388 TYR 389 PRO 390 GLY 391 ALA 392 GLU 393 VAL 394 VAL 395 SER 396 PHE 397 LYS 398 LEU 399 LEU 400 PHE 401 ASP 402 PRO 403 VAL 404 LYS 405 GLY 406 THR 407 ILE 408 PHE 409 GLY 410 ALA 411 GLN 412 ALA 413 VAL 414 GLY 415 LYS 416 ASP 417 GLY 418 ILE 419 ASP 420 LYS 421 ARG 422 ILE 423 ASP 424 VAL 425 MSE 426 ALA 427 VAL 428 ALA 429 GLN 430 ARG 431 ALA 432 GLY 433 MSE 434 THR 435 VAL 436 GLU 437 GLN 438 LEU 439 GLN 440 HIS 441 LEU 442 GLU 443 LEU 444 SER 445 TYR 446 ALA 447 PRO 448 PRO 449 TYR 450 GLY 451 SER 452 ALA 453 LYS 454 ASP 455 VAL 456 ILE 457 ASN 458 GLN 459 ALA 460 ALA 461 PHE 462 VAL 463 ALA 464 SER 465 ASN 466 ILE 467 ILE 468 LYS 469 GLY 470 ASP 471 ALA 472 THR 473 PRO 474 ILE 475 HIS 476 PHE 477 ASP 478 GLN 479 ILE 480 ASP 481 ASN 482 LEU 483 SER 484 GLU 485 ASP 486 GLN 487 LEU 488 LEU 489 LEU 490 ASP 491 VAL 492 ARG 493 ASN 494 PRO 495 GLY 496 GLU 497 LEU 498 GLN 499 ASN 500 GLY 501 GLY 502 LEU 503 GLU 504 GLY 505 ALA 506 VAL 507 ASN 508 ILE 509 PRO 510 VAL 511 ASP 512 GLU 513 LEU 514 ARG 515 ASP 516 ARG 517 MSE 518 HIS 519 GLU 520 LEU 521 PRO 522 LYS 523 ASP 524 LYS 525 GLU 526 ILE 527 ILE 528 ILE 529 PHE 530 CYS 531 GLN 532 VAL 533 GLY 534 LEU 535 ARG 536 GLY 537 ASN 538 VAL 539 ALA 540 TYR 541 ARG 542 GLN 543 LEU 544 VAL 545 ASN 546 ASN 547 GLY 548 TYR 549 ARG 550 ALA 551 ARG 552 ASN 553 LEU 554 ILE 555 GLY 556 GLY 557 TYR 558 ARG 559 THR 560 TYR 561 LYS 562 PHE 563 ALA 564 SER 565

Unit 2

MSE 1 LYS 2 LYS 3 ILE 4 LEU 5 ILE 6 ILE 7 GLY 8 GLY 9 VAL 10 ALA 11 GLY 12 GLY 13 ALA 14 SER 15 ALA 16 ALA 17 ALA 18 ARG 19 ALA 20 ARG 21 ARG 22 LEU 23 SER 24 GLU 25 THR 26 ALA 27 GLU 28 ILE 29 ILE 30 MSE 31 PHE 32 GLU 33 ARG 34 GLY 35 GLU 36 TYR 37 VAL 38 SER 39 PHE 40 ALA 41 ASN 42 CYS 43 GLY 44 LEU 45 PRO 46 TYR 47 HIS 48 ILE 49 SER 50 GLY 51 GLU 52 ILE 53 ALA 54 GLN 55 ARG 56 SER 57 ALA 58 LEU 59 VAL 60 LEU 61 GLN 62 THR 63 PRO 64 GLU 65 SER 66 PHE 67 LYS 68 ALA 69 ARG 70 PHE 71 ASN 72 VAL 73 GLU 74 VAL 75 ARG 76 VAL 77 LYS 78 HIS 79 GLU 80 VAL 81 VAL 82 ALA 83 ILE 84 ASP 85 ARG 86 ALA 87 ALA 88 LYS 89 LEU 90 VAL 91 THR 92 VAL 93 ARG 94 ARG 95 LEU 96 LEU 97 ASP 98 GLY 99 SER 100 GLU 101 TYR 102 GLN 103 GLU 104 SER 105 TYR 106 ASP 107 THR 108 LEU 109 LEU 110 LEU 111 SER 112 PRO 113 GLY 114 ALA 115 ALA 116 PRO 117 ILE 118 VAL 119 PRO 120 PRO 121 ILE 122 PRO 123 GLY 124 VAL 125 ASP 126 ASN 127 PRO 128 LEU 129 THR 130 HIS 131 SER 132 LEU 133 ARG 134 ASN 135 ILE 136 PRO 137 ASP 138 MSE 139 ASP 140 ARG 141 ILE 142 LEU 143 GLN 144 THR 145 ILE 146 GLN 147 MSE 148 ASN 149 ASN 150 VAL 151 GLU 152 HIS 153 ALA 154 THR 155 VAL 156 VAL 157 GLY 158 GLY 159 GLY 160 PHE 161 ILE 162 GLY 163 LEU 164 GLU 165 MSE 166 MSE 167 GLU 168 SER 169 LEU 170 HIS 171 HIS 172 LEU 173 GLY 174 ILE 175 LYS 176 THR 177 THR 178 LEU 179 LEU 180 GLU 181 LEU 182 ALA 183 ASP 184 GLN 185 VAL 186 MSE 187 THR 188 PRO 189 VAL 190 ASP 191 ARG 192 GLU 193 MSE 194 ALA 195 GLY 196 PHE 197 ALA 198 HIS 199 GLN 200 ALA 201 ILE 202 ARG 203 ASP 204 GLN 205 GLY 206 VAL 207 ASP 208 LEU 209 ARG 210 LEU 211 GLY 212 THR 213 ALA 214 LEU 215 SER 216 GLU 217 VAL 218 SER 219 TYR 220 GLN 221 VAL 222 GLN 223 THR 224 HIS 225 VAL 226 ALA 227 SER 228 ASP 229 ALA 230 ALA 231 GLY 232 GLU 233 ASP 234 THR 235 ALA 236 HIS 237 GLN 238 HIS 239 ILE 240 LYS 241 GLY 242 HIS 243 LEU 244 SER 245 LEU 246 THR 247 LEU 248 SER 249 ASN 250 GLY 251 GLU 252 LEU 253 LEU 254 GLU 255 THR 256 ASP 257 LEU 258 LEU 259 ILE 260 MSE 261 ALA 262 ILE 263 GLY 264 VAL 265 ARG 266 PRO 267 GLU 268 THR 269 GLN 270 LEU 271 ALA 272 ARG 273 ASP 274 ALA 275 GLY 276 LEU 277 ALA 278 ILE 279 GLY 280 GLU 281 LEU 282 GLY 283 GLY 284 ILE 285 LYS 286 VAL 287 ASN 288 ALA 289 MSE 290 MSE 291 GLN 292 THR 293 SER 294 ASP 295 PRO 296 ALA 297 ILE 298 TYR 299 ALA 300 VAL 301 GLY 302 ASP 303 ALA 304 VAL 305 GLU 306 GLU 307 GLN 308 ASP 309 PHE 310 VAL 311 THR 312 GLY 313 GLN 314 ALA 315 CYS 316 LEU 317 VAL 318 PRO 319 LEU 320 ALA 321 GLY 322 PRO 323 ALA 324 ASN 325 ARG 326 GLN 327 GLY 328 ARG 329 MSE 330 ALA 331 ALA 332 ASP 333 ASN 334 MSE 335 PHE 336 GLY 337 ARG 338 GLU 339 GLU 340 ARG 341 TYR 342 GLN 343 GLY 344 THR 345 GLN 346 GLY 347 THR 348 ALA 349 ILE 350 CYS 351 LYS 352 VAL 353 PHE 354 ASP 355 LEU 356 ALA 357 VAL 358 GLY 359 ALA 360 THR 361 GLY 362 LYS 363 ASN 364 GLU 365 LYS 366 GLN 367 LEU 368 LYS 369 GLN 370 ALA 371 GLY 372 ILE 373 ALA 374 PHE 375 GLU 376 LYS 377 VAL 378 TYR 379 VAL 380 HIS 381 THR 382 ALA 383 SER 384 HIS 385 ALA 386 SER 387 TYR 388 TYR 389 PRO 390 GLY 391 ALA 392 GLU 393 VAL 394 VAL 395 SER 396 PHE 397 LYS 398 LEU 399 LEU 400 PHE 401 ASP 402 PRO 403 VAL 404 LYS 405 GLY 406 THR 407 ILE 408 PHE 409 GLY 410 ALA 411 GLN 412 ALA 413 VAL 414 GLY 415 LYS 416 ASP 417 GLY 418 ILE 419 ASP 420 LYS 421 ARG 422 ILE 423 ASP 424 VAL 425 MSE 426 ALA 427 VAL 428 ALA 429 GLN 430 ARG 431 ALA 432 GLY 433 MSE 434 THR 435 VAL 436 GLU 437 GLN 438 LEU 439 GLN 440 HIS 441 LEU 442 GLU 443 LEU 444 SER 445 TYR 446 ALA 447 PRO 448 PRO 449 TYR 450 GLY 451 SER 452 ALA 453 LYS 454 ASP 455 VAL 456 ILE 457 ASN 458 GLN 459 ALA 460 ALA 461 PHE 462 VAL 463 ALA 464 SER 465 ASN 466 ILE 467 ILE 468 LYS 469 GLY 470 ASP 471 ALA 472 THR 473 PRO 474 ILE 475 HIS 476 PHE 477 ASP 478 GLN 479 ILE 480 ASP 481 ASN 482 LEU 483 SER 484 GLU 485 ASP 486 GLN 487 LEU 488 LEU 489 LEU 490 ASP 491 VAL 492 ARG 493 ASN 494 PRO 495 GLY 496 GLU 497 LEU 498 GLN 499 ASN 500 GLY 501 GLY 502 LEU 503 GLU 504 GLY 505 ALA 506 VAL 507 ASN 508 ILE 509 PRO 510 VAL 511 ASP 512 GLU 513 LEU 514 ARG 515 ASP 516 ARG 517 MSE 518 HIS 519 GLU 520 LEU 521 PRO 522 LYS 523 ASP 524 LYS 525 GLU 526 ILE 527 ILE 528 ILE 529 PHE 530 CYS 531 GLN 532 VAL 533 GLY 534 LEU 535 ARG 536 GLY 537 ASN 538 VAL 539 ALA 540 TYR 541 ARG 542 GLN 543 LEU 544 VAL 545 ASN 546 ASN 547 GLY 548 TYR 549 ARG 550 ALA 551 ARG 552 ASN 553 LEU 554 ILE 555 GLY 556 GLY 557 TYR 558 ARG 559 THR 560 TYR 561 LYS 562 PHE 563 ALA 564 SER 565

Ligands

Unit 3	CL 575 FAD 900 COA 901
Unit 4	CL 575 FAD 900 COA 901