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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF RAB1B COVALENTLY MODIFIED WITH AMP AT Y
Keywords POSTTRANSLATIONAL MODIFICATION, AMPYLATION, ADENYLYLATION, R VESICULAR TRANSPORT, PROTEIN TRANSPORT
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3NKV     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RAS-RELATED PROTEIN RAB-1B  A 170 1355 0
2  Protein   RAS-RELATED PROTEIN RAB-1B  B 169 1346 0
3  Ligand   RAS-RELATED PROTEIN RAB-1B  A 4 0 56
4  Ligand   RAS-RELATED PROTEIN RAB-1B  B 4 0 56
5 Water     245 0 245
total       592 2701 357

Proteins
Unit 1 GLU4 TYR5 ASP6 TYR7 LEU8 PHE9 LYS10 LEU11 LEU12 LEU13 ILE14 GLY15 ASP16 SER17 GLY18 VAL19 GLY20 LYS21 SER22 CYS23 LEU24 LEU25 LEU26 ARG27 PHE28 ALA29 ASP30 ASP31 THR32 TYR33 THR34 GLU35 SER36 TYR37 ILE38 SER39 THR40 ILE41 GLY42 VAL43 ASP44 PHE45 LYS46 ILE47 ARG48 THR49 ILE50 GLU51 LEU52 ASP53 GLY54 LYS55 THR56 ILE57 LYS58 LEU59 GLN60 ILE61 TRP62 ASP63 THR64 ALA65 GLY66 GLN67 GLU68 ARG69 PHE70 ARG71 THR72 ILE73 THR74 SER75 SER76 TYR77 TYR78 ARG79 GLY80 ALA81 HIS82 GLY83 ILE84 ILE85 VAL86 VAL87 TYR88 ASP89 VAL90 THR91 ASP92 GLN93 GLU94 SER95 TYR96 ALA97 ASN98 VAL99 LYS100 GLN101 TRP102 LEU103 GLN104 GLU105 ILE106 ASP107 ARG108 TYR109 ALA110 SER111 GLU112 ASN113 VAL114 ASN115 LYS116 LEU117 LEU118 VAL119 GLY120 ASN121 LYS122 SER123 ASP124 LEU125 THR126 THR127 LYS128 LYS129 VAL130 VAL131 ASP132 ASN133 THR134 THR135 ALA136 LYS137 GLU138 PHE139 ALA140 ASP141 SER142 LEU143 GLY144 ILE145 PRO146 PHE147 LEU148 GLU149 THR150 SER151 ALA152 LYS153 ASN154 ALA155 THR156 ASN157 VAL158 GLU159 GLN160 ALA161 PHE162 MET163 THR164 MET165 ALA166 ALA167 GLU168 ILE169 LYS170 LYS171 ARG172 MET173
Unit 2 GLU4 TYR5 ASP6 TYR7 LEU8 PHE9 LYS10 LEU11 LEU12 LEU13 ILE14 GLY15 ASP16 SER17 GLY18 VAL19 GLY20 LYS21 SER22 CYS23 LEU24 LEU25 LEU26 ARG27 PHE28 ALA29 ASP30 ASP31 THR32 TYR33 THR34 GLU35 SER36 TYR37 ILE38 SER39 THR40 ILE41 GLY42 VAL43 ASP44 PHE45 LYS46 ILE47 ARG48 THR49 ILE50 GLU51 LEU52 ASP53 GLY54 LYS55 THR56 ILE57 LYS58 LEU59 GLN60 ILE61 TRP62 ASP63 THR64 ALA65 GLY66 GLN67 GLU68 ARG69 PHE70 ARG71 THR72 ILE73 THR74 SER75 SER76 TYR77 TYR78 ARG79 GLY80 ALA81 HIS82 GLY83 ILE84 ILE85 VAL86 VAL87 TYR88 ASP89 VAL90 THR91 ASP92 GLN93 GLU94 SER95 TYR96 ALA97 ASN98 VAL99 LYS100 GLN101 TRP102 LEU103 GLN104 GLU105 ILE106 ASP107 ARG108 TYR109 ALA110 SER111 ASN113 VAL114 ASN115 LYS116 LEU117 LEU118 VAL119 GLY120 ASN121 LYS122 SER123 ASP124 LEU125 THR126 THR127 LYS128 LYS129 VAL130 VAL131 ASP132 ASN133 THR134 THR135 ALA136 LYS137 GLU138 PHE139 ALA140 ASP141 SER142 LEU143 GLY144 ILE145 PRO146 PHE147 LEU148 GLU149 THR150 SER151 ALA152 LYS153 ASN154 ALA155 THR156 ASN157 VAL158 GLU159 GLN160 ALA161 PHE162 MET163 THR164 MET165 ALA166 ALA167 GLU168 ILE169 LYS170 LYS171 ARG172 MET173

Ligands
Unit 3 BA175 GNP400 MG500 AMP600
Unit 4 BA175 GNP400 MG500 AMP600

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany