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Sequence, Chains, Asymmetric and Biological Units

Title 1.9 A RESOLUTION X-RAY STRUCTURE OF (GGCAGCAGCC)2
Keywords CAG REPEATS, POLY-Q DISEASES, RNA
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3NJ7     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 10 213 0
2  RNA    B 10 213 0
3  RNA    C 10 213 0
4  RNA    D 10 213 0
5  RNA    E 10 213 0
6  RNA    F 10 213 0
7  Ligand   5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3'  A 1 0 5
8  Ligand   5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3'  B 1 0 5
9  Ligand   5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3'  C 1 0 5
10  Ligand   5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3'  D 1 0 5
11  Ligand   5'-R(*GP*GP*CP*AP*GP*CP*AP*GP*CP*C)-3'  E 2 0 10
12 Water     177 0 177
total       243 1278 207
Nucleic acids
Unit 1 G1 G2 C3 A4 G5 C6 A7 G8 C9 C10
Unit 2 G1 G2 C3 A4 G5 C6 A7 G8 C9 C10
Unit 3 G1 G2 C3 A4 G5 C6 A7 G8 C9 C10
Unit 4 G1 G2 C3 A4 G5 C6 A7 G8 C9 C10
Unit 5 G1 G2 C3 A4 G5 C6 A7 G8 C9 C10
Unit 6 G1 G2 C3 A4 G5 C6 A7 G8 C9 C10
Ligands
Unit 7 SO411
Unit 8 SO411
Unit 9 SO411
Unit 10 SO411
Unit 11 SO411 SO412
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany