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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF THERAPEUTIC ANTIBOD DACLIZUMAB IN COMPLEX WITH IL-2RA (CD25) ECTODOMAIN
Keywords IL-2RA, CD25, DACLIZUMAB, ZENAPAX, THERAPEUTIC ANTIBODY, IMM SYSTEM, IMMUNE SYSTEM-CYTOKINE COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3NFP     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HEAVY CHAIN OF FAB FRAGMENT OF DACLIZUMAB  A 213 1600 0
2  Protein   LIGHT CHAIN OF FAB FRAGMENT OF DACLIZUMAB  B 212 1626 0
3  Protein   HEAVY CHAIN OF FAB FRAGMENT OF DACLIZUMAB  H 214 1609 0
4  Protein   LIGHT CHAIN OF FAB FRAGMENT OF DACLIZUMAB  L 212 1626 0
5  Protein   INTERLEUKIN-2 RECEPTOR SUBUNIT ALPHA  I 124 981 0
6  Protein   INTERLEUKIN-2 RECEPTOR SUBUNIT ALPHA  K 111 882 0
7 Water     97 0 97
total       1183 8324 97

Proteins
Unit 1 GLN1 VAL2 GLN3 LEU4 VAL5 GLN6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 SER16 SER17 VAL18 LYS19 VAL20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 TYR32 ARG33 MET34 HIS35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 TYR50 ILE51 ASN52 PRO53 SER54 THR55 GLY56 TYR57 THR58 GLU59 TYR60 ASN61 GLN62 LYS63 PHE64 LYS65 ASP66 LYS67 ALA68 THR69 ILE70 THR71 ALA72 ASP73 GLU74 SER75 THR76 ASN77 THR78 ALA79 TYR80 MET81 GLU82 LEU83 SER84 SER85 LEU86 ARG87 SER88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ARG98 GLY99 GLY100 GLY101 VAL102 PHE103 ASP104 TYR105 TRP106 GLY107 GLN108 GLY109 THR110 LEU111 VAL112 THR113 VAL114 SER115 SER116 ALA117 SER118 THR119 LYS120 GLY121 PRO122 SER123 VAL124 PHE125 PRO126 LEU127 ALA128 PRO129 SER133 THR134 SER135 GLY136 GLY137 THR138 ALA139 ALA140 LEU141 GLY142 CYS143 LEU144 VAL145 LYS146 ASP147 TYR148 PHE149 PRO150 GLU151 PRO152 VAL153 THR154 VAL155 SER156 TRP157 ASN158 SER159 GLY160 ALA161 LEU162 THR163 SER164 GLY165 VAL166 HIS167 THR168 PHE169 PRO170 ALA171 VAL172 LEU173 GLN174 SER175 SER176 GLY177 LEU178 TYR179 SER180 LEU181 SER182 SER183 VAL184 VAL185 THR186 VAL187 PRO188 SER189 SER190 SER191 LEU192 GLY193 THR194 GLN195 THR196 TYR197 ILE198 CYS199 ASN200 VAL201 ASN202 HIS203 LYS204 PRO205 SER206 ASN207 THR208 LYS209 VAL210 ASP211 LYS212 LYS213 VAL214 GLU215 PRO216
Unit 2 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 THR10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 SER24 ALA25 SER26 SER27 SER28 ILE29 SER30 TYR31 MET32 HIS33 TRP34 TYR35 GLN36 GLN37 LYS38 PRO39 GLY40 LYS41 ALA42 PRO43 LYS44 LEU45 LEU46 ILE47 TYR48 THR49 THR50 SER51 ASN52 LEU53 ALA54 SER55 GLY56 VAL57 PRO58 ALA59 ARG60 PHE61 SER62 GLY63 SER64 GLY65 SER66 GLY67 THR68 GLU69 PHE70 THR71 LEU72 THR73 ILE74 SER75 SER76 LEU77 GLN78 PRO79 ASP80 ASP81 PHE82 ALA83 THR84 TYR85 TYR86 CYS87 HIS88 GLN89 ARG90 SER91 THR92 TYR93 PRO94 LEU95 THR96 PHE97 GLY98 GLN99 GLY100 THR101 LYS102 VAL103 GLU104 VAL105 LYS106 ARG107 THR108 VAL109 ALA110 ALA111 PRO112 SER113 VAL114 PHE115 ILE116 PHE117 PRO118 PRO119 SER120 ASP121 GLU122 GLN123 LEU124 LYS125 SER126 GLY127 THR128 ALA129 SER130 VAL131 VAL132 CYS133 LEU134 LEU135 ASN136 ASN137 PHE138 TYR139 PRO140 ARG141 GLU142 ALA143 LYS144 VAL145 GLN146 TRP147 LYS148 VAL149 ASP150 ASN151 ALA152 LEU153 GLN154 SER155 GLY156 ASN157 SER158 GLN159 GLU160 SER161 VAL162 THR163 GLU164 GLN165 ASP166 SER167 LYS168 ASP169 SER170 THR171 TYR172 SER173 LEU174 SER175 SER176 THR177 LEU178 THR179 LEU180 SER181 LYS182 ALA183 ASP184 TYR185 GLU186 LYS187 HIS188 LYS189 VAL190 TYR191 ALA192 CYS193 GLU194 VAL195 THR196 HIS197 GLN198 GLY199 LEU200 SER201 SER202 PRO203 VAL204 THR205 LYS206 SER207 PHE208 ASN209 ARG210 GLY211 GLU212
Unit 3 GLN1 VAL2 GLN3 LEU4 VAL5 GLN6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 SER16 SER17 VAL18 LYS19 VAL20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 TYR32 ARG33 MET34 HIS35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 GLN43 GLY44 LEU45 GLU46 TRP47 ILE48 GLY49 TYR50 ILE51 ASN52 PRO53 SER54 THR55 GLY56 TYR57 THR58 GLU59 TYR60 ASN61 GLN62 LYS63 PHE64 LYS65 ASP66 LYS67 ALA68 THR69 ILE70 THR71 ALA72 ASP73 GLU74 SER75 THR76 ASN77 THR78 ALA79 TYR80 MET81 GLU82 LEU83 SER84 SER85 LEU86 ARG87 SER88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 ARG98 GLY99 GLY100 GLY101 VAL102 PHE103 ASP104 TYR105 TRP106 GLY107 GLN108 GLY109 THR110 LEU111 VAL112 THR113 VAL114 SER115 SER116 ALA117 SER118 THR119 LYS120 GLY121 PRO122 SER123 VAL124 PHE125 PRO126 LEU127 ALA128 PRO129 LYS132 SER133 THR134 SER135 GLY136 GLY137 THR138 ALA139 ALA140 LEU141 GLY142 CYS143 LEU144 VAL145 LYS146 ASP147 TYR148 PHE149 PRO150 GLU151 PRO152 VAL153 THR154 VAL155 SER156 TRP157 ASN158 SER159 GLY160 ALA161 LEU162 THR163 SER164 GLY165 VAL166 HIS167 THR168 PHE169 PRO170 ALA171 VAL172 LEU173 GLN174 SER175 SER176 GLY177 LEU178 TYR179 SER180 LEU181 SER182 SER183 VAL184 VAL185 THR186 VAL187 PRO188 SER189 SER190 SER191 LEU192 GLY193 THR194 GLN195 THR196 TYR197 ILE198 CYS199 ASN200 VAL201 ASN202 HIS203 LYS204 PRO205 SER206 ASN207 THR208 LYS209 VAL210 ASP211 LYS212 LYS213 VAL214 GLU215 PRO216
Unit 4 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 THR10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 SER24 ALA25 SER26 SER27 SER28 ILE29 SER30 TYR31 MET32 HIS33 TRP34 TYR35 GLN36 GLN37 LYS38 PRO39 GLY40 LYS41 ALA42 PRO43 LYS44 LEU45 LEU46 ILE47 TYR48 THR49 THR50 SER51 ASN52 LEU53 ALA54 SER55 GLY56 VAL57 PRO58 ALA59 ARG60 PHE61 SER62 GLY63 SER64 GLY65 SER66 GLY67 THR68 GLU69 PHE70 THR71 LEU72 THR73 ILE74 SER75 SER76 LEU77 GLN78 PRO79 ASP80 ASP81 PHE82 ALA83 THR84 TYR85 TYR86 CYS87 HIS88 GLN89 ARG90 SER91 THR92 TYR93 PRO94 LEU95 THR96 PHE97 GLY98 GLN99 GLY100 THR101 LYS102 VAL103 GLU104 VAL105 LYS106 ARG107 THR108 VAL109 ALA110 ALA111 PRO112 SER113 VAL114 PHE115 ILE116 PHE117 PRO118 PRO119 SER120 ASP121 GLU122 GLN123 LEU124 LYS125 SER126 GLY127 THR128 ALA129 SER130 VAL131 VAL132 CYS133 LEU134 LEU135 ASN136 ASN137 PHE138 TYR139 PRO140 ARG141 GLU142 ALA143 LYS144 VAL145 GLN146 TRP147 LYS148 VAL149 ASP150 ASN151 ALA152 LEU153 GLN154 SER155 GLY156 ASN157 SER158 GLN159 GLU160 SER161 VAL162 THR163 GLU164 GLN165 ASP166 SER167 LYS168 ASP169 SER170 THR171 TYR172 SER173 LEU174 SER175 SER176 THR177 LEU178 THR179 LEU180 SER181 LYS182 ALA183 ASP184 TYR185 GLU186 LYS187 HIS188 LYS189 VAL190 TYR191 ALA192 CYS193 GLU194 VAL195 THR196 HIS197 GLN198 GLY199 LEU200 SER201 SER202 PRO203 VAL204 THR205 LYS206 SER207 PHE208 ASN209 ARG210 GLY211 GLU212
Unit 5 GLU1 LEU2 CYS3 ASP4 ASP5 ASP6 PRO7 PRO8 GLU9 ILE10 PRO11 HIS12 ALA13 THR14 PHE15 LYS16 ALA17 MET18 ALA19 TYR20 LYS21 GLU22 GLY23 THR24 MET25 LEU26 ASN27 CYS28 GLU29 CYS30 LYS31 ARG36 ILE37 LYS38 SER39 GLY40 SER41 LEU42 TYR43 MET44 LEU45 CYS46 THR47 GLY48 ASN49 SER50 SER51 HIS52 SER53 SER54 TRP55 ASP56 ASN57 GLN58 CYS59 GLN60 CYS61 THR62 SER63 SER64 PRO101 GLY102 HIS103 CYS104 ARG105 GLU106 PRO107 PRO108 PRO109 TRP110 GLU111 ASN112 GLU113 ALA114 THR115 GLU116 ARG117 ILE118 TYR119 HIS120 PHE121 VAL122 VAL123 GLY124 GLN125 MET126 VAL127 TYR128 TYR129 GLN130 CYS131 VAL132 GLN133 GLY134 TYR135 ARG136 ALA137 LEU138 HIS139 ARG140 GLY141 PRO142 ALA143 GLU144 SER145 VAL146 CYS147 LYS148 MET149 THR150 HIS151 GLY152 LYS153 THR154 ARG155 TRP156 THR157 GLN158 PRO159 GLN160 LEU161 ILE162 CYS163 THR164
Unit 6 GLU1 LEU2 CYS3 ASP4 ASP5 ASP6 PRO7 PRO8 GLU9 ILE10 PRO11 HIS12 ALA13 THR14 PHE15 LYS16 ALA17 MET18 ALA19 TYR20 LYS21 GLU22 GLY23 THR24 MET25 LEU26 ASN27 CYS28 GLU29 CYS30 ARG36 ILE37 LYS38 SER39 GLY40 SER41 LEU42 TYR43 MET44 LEU45 CYS46 THR47 GLY48 ASN49 SER50 SER51 HIS52 SER53 SER54 TRP55 ASP56 ASN57 GLN58 CYS59 GLN60 CYS61 THR62 SER63 SER64 GLY102 HIS103 CYS104 ARG105 GLU106 PRO107 PRO108 PRO109 TRP110 GLU111 ASN112 GLU113 ALA114 THR115 GLU116 ARG117 ILE118 TYR119 HIS120 PHE121 VAL122 VAL123 GLY124 GLN125 MET126 VAL127 TYR128 TYR129 GLN133 GLY134 TYR135 ARG136 ALA137 ALA143 GLU144 SER145 VAL146 CYS147 LYS148 MET149 THR150 HIS151 GLY152 LYS153 THR154 ARG155 TRP156 THR157 GLN158 PRO159 GLN160 LEU161

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany