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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TANDEM WINGED HELIX DOMAIN OF RNA POLYM SUBUNIT A49
Keywords WINGED HELIX, TRANSCRIPTION, RNA POLYMERASE, DNA BINDING, DN PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3NFI     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49  A 219 1719 32
2  Protein   DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49  B 227 1770 40
3  Protein   DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49  C 214 1677 32
4  Protein   DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49  D 220 1727 32
5  Protein   DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49  E 212 1656 32
6  Ligand   DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49  E 1 0 12
7 Water     786 0 786
total       1879 8549 966
Proteins
Unit 1 ASP185 ARG186 PRO187 THR188 PRO189 LEU190 ALA191 ASN192 ILE193 ASP194 ALA195 THR196 ASP197 VAL198 GLU199 GLN200 ILE201 TYR202 PRO203 ILE204 GLU205 SER206 ILE207 ILE208 PRO209 LYS210 LYS211 GLU212 LEU213 GLN214 PHE215 ILE216 ARG217 VAL218 SER219 SER220 ILE221 LEU222 LYS223 GLU224 ALA225 ASP226 LYS227 GLU228 LYS229 LYS230 LEU231 GLU232 LEU233 PHE234 PRO235 TYR236 GLN237 ASN238 ASN239 SER240 LYS241 TYR242 VAL243 ALA244 LYS245 LYS246 LEU247 ASP248 SER249 LEU250 THR251 GLN252 PRO253 SER254 GLN255 MSE256 THR257 LYS258 LEU259 GLN260 MSE261 LEU262 TYR263 TYR264 LEU265 SER266 LEU267 LEU268 LEU269 GLY270 VAL271 TYR272 GLU273 ASN274 ARG275 ARG276 VAL277 ASN278 ASN279 LYS280 THR281 LYS282 LEU283 LEU284 GLU285 ARG286 LEU287 ASN288 SER289 PRO290 PRO291 GLU292 ILE293 LEU294 VAL295 ASP296 GLY297 ILE298 LEU299 SER300 ARG301 PHE302 THR303 VAL304 ILE305 LYS306 PRO307 GLY308 GLN309 PHE310 GLY311 ARG312 SER313 LYS314 ASP315 ARG316 SER317 TYR318 PHE319 ILE320 ASP321 PRO322 GLN323 ASN324 GLU325 ASP326 LYS327 ILE328 LEU329 CYS330 TYR331 ILE332 LEU333 ALA334 ILE335 ILE336 MSE337 HIS338 LEU339 ASP340 ASN341 PHE342 ILE343 VAL344 GLU345 ILE346 THR347 PRO348 LEU349 ALA350 HIS351 GLU352 LEU353 ASN354 LEU355 LYS356 PRO357 SER358 LYS359 VAL360 VAL361 SER362 LEU363 PHE364 ARG365 VAL366 LEU367 GLY368 ALA369 ILE370 VAL371 LYS372 GLY373 ALA374 THR375 VAL376 ALA377 GLN378 ALA379 GLU380 ALA381 PHE382 GLY383 ILE384 PRO385 LYS386 SER387 THR388 ALA389 ALA390 SER391 TYR392 LYS393 ILE394 ALA395 THR396 MSE397 LYS398 VAL399 PRO400 PHE401 LYS402 LEU403
Unit 2 LEU172 PRO173 THR174 ARG175 ALA176 GLN177 MSE178 ASP179 GLU180 ILE181 THR182 SER183 ASN184 ASP185 ARG186 PRO187 THR188 PRO189 LEU190 ALA191 ASN192 ILE193 ASP194 ALA195 THR196 ASP197 VAL198 GLU199 GLN200 ILE201 TYR202 PRO203 ILE204 GLU205 SER206 ILE207 ILE208 PRO209 LYS210 LYS211 GLU212 LEU213 GLN214 PHE215 ILE216 ARG217 VAL218 SER219 SER220 ILE221 LEU222 LYS223 GLU224 ALA225 ASP226 LYS227 GLU228 LYS229 LYS230 LEU231 GLU232 LEU233 PHE234 PRO235 TYR236 GLN237 ASN238 ASN239 SER240 LYS241 TYR242 VAL243 ALA244 LYS245 LYS246 LEU247 ASP248 SER249 LEU250 THR251 GLN252 PRO253 SER254 GLN255 MSE256 THR257 LYS258 LEU259 GLN260 MSE261 LEU262 TYR263 TYR264 LEU265 SER266 LEU267 LEU268 LEU269 GLY270 VAL271 TYR272 GLU273 ASN274 ARG275 ARG276 VAL277 ASN278 ASN279 LYS280 THR281 LYS282 LEU283 LEU284 GLU285 ARG286 LEU287 ASN288 SER289 PRO290 PRO291 GLU292 ILE293 LEU294 VAL295 ASP296 GLY297 ILE298 LEU299 SER300 ARG301 PHE302 THR303 VAL304 ILE305 LYS306 PRO307 SER313 LYS314 ASP315 ARG316 SER317 TYR318 PHE319 ILE320 ASP321 PRO322 GLN323 ASN324 GLU325 ASP326 LYS327 ILE328 LEU329 CYS330 TYR331 ILE332 LEU333 ALA334 ILE335 ILE336 MSE337 HIS338 LEU339 ASP340 ASN341 PHE342 ILE343 VAL344 GLU345 ILE346 THR347 PRO348 LEU349 ALA350 HIS351 GLU352 LEU353 ASN354 LEU355 LYS356 PRO357 SER358 LYS359 VAL360 VAL361 SER362 LEU363 PHE364 ARG365 VAL366 LEU367 GLY368 ALA369 ILE370 VAL371 LYS372 GLY373 ALA374 THR375 VAL376 ALA377 GLN378 ALA379 GLU380 ALA381 PHE382 GLY383 ILE384 PRO385 LYS386 SER387 THR388 ALA389 ALA390 SER391 TYR392 LYS393 ILE394 ALA395 THR396 MSE397 LYS398 VAL399 PRO400 PHE401 LYS402 LEU403
Unit 3 ASN184 ASP185 ARG186 PRO187 THR188 PRO189 LEU190 ALA191 ASN192 ILE193 ASP194 ALA195 THR196 ASP197 VAL198 GLU199 GLN200 ILE201 TYR202 PRO203 ILE204 GLU205 SER206 ILE207 ILE208 PRO209 LYS210 LYS211 GLU212 LEU213 GLN214 PHE215 ILE216 ARG217 VAL218 SER219 SER220 ILE221 LEU222 LYS223 GLU224 ALA225 ASP226 LYS227 GLU228 LYS229 LYS230 LEU231 GLU232 LEU233 PHE234 PRO235 TYR236 GLN237 ASN238 ASN239 SER240 LYS241 TYR242 VAL243 ALA244 LYS245 LYS246 LEU247 ASP248 SER249 LEU250 THR251 GLN252 PRO253 SER254 GLN255 MSE256 THR257 LYS258 LEU259 GLN260 MSE261 LEU262 TYR263 TYR264 LEU265 SER266 LEU267 LEU268 LEU269 GLY270 VAL271 TYR272 GLU273 ASN274 ARG275 ARG276 VAL277 ASN278 ASN279 LYS280 THR281 LYS282 LEU283 LEU284 GLU285 ARG286 LEU287 ASN288 SER289 PRO290 PRO291 GLU292 ILE293 LEU294 VAL295 ASP296 GLY297 ILE298 LEU299 SER300 ARG301 PHE302 THR303 VAL304 ILE305 LYS306 PRO307 GLY308 ASP315 ARG316 SER317 TYR318 PHE319 ILE320 ASP321 PRO322 GLN323 ASN324 GLU325 ASP326 LYS327 ILE328 LEU329 CYS330 TYR331 ILE332 LEU333 ALA334 ILE335 ILE336 MSE337 HIS338 LEU339 ASP340 ASN341 PHE342 ILE343 VAL344 GLU345 ILE346 THR347 PRO348 LEU349 ALA350 HIS351 GLU352 LEU353 ASN354 LEU355 LYS356 PRO357 SER358 LYS359 VAL360 VAL361 SER362 LEU363 PHE364 ARG365 VAL366 LEU367 GLY368 ALA369 ILE370 VAL371 LYS372 GLY373 ALA374 THR375 VAL376 ALA377 GLN378 ALA379 GLU380 ALA381 PHE382 GLY383 ILE384 PRO385 LYS386 SER387 THR388 ALA389 ALA390 SER391 TYR392 LYS393 ILE394 ALA395 THR396 MSE397 LYS398 VAL399 PRO400 PHE401 LYS402 LEU403
Unit 4 ASN184 ASP185 ARG186 PRO187 THR188 PRO189 LEU190 ALA191 ASN192 ILE193 ASP194 ALA195 THR196 ASP197 VAL198 GLU199 GLN200 ILE201 TYR202 PRO203 ILE204 GLU205 SER206 ILE207 ILE208 PRO209 LYS210 LYS211 GLU212 LEU213 GLN214 PHE215 ILE216 ARG217 VAL218 SER219 SER220 ILE221 LEU222 LYS223 GLU224 ALA225 ASP226 LYS227 GLU228 LYS229 LYS230 LEU231 GLU232 LEU233 PHE234 PRO235 TYR236 GLN237 ASN238 ASN239 SER240 LYS241 TYR242 VAL243 ALA244 LYS245 LYS246 LEU247 ASP248 SER249 LEU250 THR251 GLN252 PRO253 SER254 GLN255 MSE256 THR257 LYS258 LEU259 GLN260 MSE261 LEU262 TYR263 TYR264 LEU265 SER266 LEU267 LEU268 LEU269 GLY270 VAL271 TYR272 GLU273 ASN274 ARG275 ARG276 VAL277 ASN278 ASN279 LYS280 THR281 LYS282 LEU283 LEU284 GLU285 ARG286 LEU287 ASN288 SER289 PRO290 PRO291 GLU292 ILE293 LEU294 VAL295 ASP296 GLY297 ILE298 LEU299 SER300 ARG301 PHE302 THR303 VAL304 ILE305 LYS306 PRO307 GLY308 GLN309 PHE310 GLY311 ARG312 SER313 LYS314 ASP315 ARG316 SER317 TYR318 PHE319 ILE320 ASP321 PRO322 GLN323 ASN324 GLU325 ASP326 LYS327 ILE328 LEU329 CYS330 TYR331 ILE332 LEU333 ALA334 ILE335 ILE336 MSE337 HIS338 LEU339 ASP340 ASN341 PHE342 ILE343 VAL344 GLU345 ILE346 THR347 PRO348 LEU349 ALA350 HIS351 GLU352 LEU353 ASN354 LEU355 LYS356 PRO357 SER358 LYS359 VAL360 VAL361 SER362 LEU363 PHE364 ARG365 VAL366 LEU367 GLY368 ALA369 ILE370 VAL371 LYS372 GLY373 ALA374 THR375 VAL376 ALA377 GLN378 ALA379 GLU380 ALA381 PHE382 GLY383 ILE384 PRO385 LYS386 SER387 THR388 ALA389 ALA390 SER391 TYR392 LYS393 ILE394 ALA395 THR396 MSE397 LYS398 VAL399 PRO400 PHE401 LYS402 LEU403
Unit 5 ASN184 ASP185 ARG186 PRO187 THR188 PRO189 LEU190 ALA191 ASN192 ILE193 ASP194 ALA195 THR196 ASP197 VAL198 GLU199 GLN200 ILE201 TYR202 PRO203 ILE204 GLU205 SER206 ILE207 ILE208 PRO209 LYS210 LYS211 GLU212 LEU213 GLN214 PHE215 ILE216 ARG217 VAL218 SER219 SER220 ILE221 LEU222 LYS223 GLU224 ALA225 ASP226 LYS227 GLU228 LYS229 LYS230 LEU231 GLU232 LEU233 PHE234 PRO235 TYR236 GLN237 ASN238 ASN239 SER240 LYS241 TYR242 VAL243 ALA244 LYS245 LYS246 LEU247 ASP248 SER249 LEU250 THR251 GLN252 PRO253 SER254 GLN255 MSE256 THR257 LYS258 LEU259 GLN260 MSE261 LEU262 TYR263 TYR264 LEU265 SER266 LEU267 LEU268 LEU269 GLY270 VAL271 TYR272 GLU273 ASN274 ARG275 ARG276 VAL277 ASN278 ASN279 LYS280 THR281 LYS282 LEU283 LEU284 GLU285 ARG286 LEU287 ASN288 SER289 PRO290 PRO291 GLU292 ILE293 LEU294 VAL295 ASP296 GLY297 ILE298 LEU299 SER300 ARG301 PHE302 THR303 VAL304 ILE305 LYS306 ASP315 ARG316 SER317 TYR318 PHE319 ILE320 ASP321 PRO322 GLN323 ASN324 GLU325 ASP326 LYS327 ILE328 LEU329 CYS330 TYR331 ILE332 LEU333 ALA334 ILE335 ILE336 MSE337 HIS338 LEU339 ASP340 ASN341 PHE342 ILE343 VAL344 GLU345 ILE346 THR347 PRO348 LEU349 ALA350 HIS351 GLU352 LEU353 ASN354 LEU355 LYS356 PRO357 SER358 LYS359 VAL360 VAL361 SER362 LEU363 PHE364 ARG365 VAL366 LEU367 GLY368 ALA369 ILE370 VAL371 LYS372 GLY373 ALA374 THR375 VAL376 ALA377 GLN378 ALA379 GLU380 ALA381 PHE382 GLY383 ILE384 PRO385 LYS386 SER387 THR388 ALA389 ALA390 SER391 TYR392 LYS393 ILE394 ALA395 THR396 MSE397 LYS398 VAL399 PRO400 PHE401 LYS402 LEU403
Ligands
Unit 6 PE41
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany