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Title | ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH ASPARTYL ADENYLATE | |
Keywords | ROSSMANN FOLD, OB FOLD, LIGASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3NEM | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | ASPARTYL-TRNA SYNTHETASE | A | 438 | 3593 | 0 |
2 | Protein | ASPARTYL-TRNA SYNTHETASE | B | 438 | 3593 | 0 |
3 | Ligand | ASPARTYL-TRNA SYNTHETASE | A | 1 | 0 | 31 |
4 | Ligand | ASPARTYL-TRNA SYNTHETASE | B | 4 | 0 | 34 |
5 | Water | 473 | 0 | 473 | ||
total | 1354 | 7186 | 538 |
Unit 1 | MET1 TYR2 ARG3 THR4 HIS5 TYR6 SER7 SER8 GLU9 ILE10 THR11 GLU12 GLU13 LEU14 ASN15 GLY16 GLN17 LYS18 VAL19 LYS20 VAL21 ALA22 GLY23 TRP24 VAL25 TRP26 GLU27 VAL28 LYS29 ASP30 LEU31 GLY32 GLY33 ILE34 LYS35 PHE36 LEU37 TRP38 ILE39 ARG40 ASP41 ARG42 ASP43 GLY44 ILE45 VAL46 GLN47 ILE48 THR49 ALA50 PRO51 LYS52 LYS53 LYS54 VAL55 ASP56 PRO57 GLU58 LEU59 PHE60 LYS61 LEU62 ILE63 PRO64 LYS65 LEU66 ARG67 SER68 GLU69 ASP70 VAL71 VAL72 ALA73 VAL74 GLU75 GLY76 VAL77 VAL78 ASN79 PHE80 THR81 PRO82 LYS83 ALA84 LYS85 LEU86 GLY87 PHE88 GLU89 ILE90 LEU91 PRO92 GLU93 LYS94 ILE95 VAL96 VAL97 LEU98 ASN99 ARG100 ALA101 GLU102 THR103 PRO104 LEU105 PRO106 LEU107 ASP108 PRO109 THR110 GLY111 LYS112 VAL113 LYS114 ALA115 GLU116 LEU117 ASP118 THR119 ARG120 LEU121 ASP122 ASN123 ARG124 PHE125 MET126 ASP127 LEU128 ARG129 ARG130 PRO131 GLU132 VAL133 MET134 ALA135 ILE136 PHE137 LYS138 ILE139 ARG140 SER141 SER142 VAL143 PHE144 LYS145 ALA146 VAL147 ARG148 ASP149 PHE150 PHE151 HIS152 GLU153 ASN154 GLY155 PHE156 ILE157 GLU158 ILE159 HIS160 THR161 PRO162 LYS163 ILE164 ILE165 ALA166 THR167 ALA168 THR169 GLU170 GLY171 GLY172 THR173 GLU174 LEU175 PHE176 PRO177 MET178 LYS179 TYR180 PHE181 GLU182 GLU183 ASP184 ALA185 PHE186 LEU187 ALA188 GLN189 SER190 PRO191 GLN192 LEU193 TYR194 LYS195 GLN196 ILE197 MET198 MET199 ALA200 SER201 GLY202 LEU203 ASP204 ARG205 VAL206 TYR207 GLU208 ILE209 ALA210 PRO211 ILE212 PHE213 ARG214 ALA215 GLU216 GLU217 HIS218 ASN219 THR220 THR221 ARG222 HIS223 LEU224 ASN225 GLU226 ALA227 TRP228 SER229 ILE230 ASP231 SER232 GLU233 MET234 ALA235 PHE236 ILE237 GLU238 ASP239 GLU240 GLU241 GLU242 VAL243 MET244 SER245 PHE246 LEU247 GLU248 ARG249 LEU250 VAL251 ALA252 HIS253 ALA254 ILE255 ASN256 TYR257 VAL258 ARG259 GLU260 HIS261 ASN262 ALA263 LYS264 GLU265 LEU266 ASP267 ILE268 LEU269 ASN270 PHE271 GLU272 LEU273 GLU274 GLU275 PRO276 LYS277 LEU278 PRO279 PHE280 PRO281 ARG282 VAL283 SER284 TYR285 ASP286 LYS287 ALA288 LEU289 GLU290 ILE291 LEU292 GLY293 ASP294 LEU295 GLY296 LYS297 GLU298 ILE299 PRO300 TRP301 GLY302 GLU303 ASP304 ILE305 ASP306 THR307 GLU308 GLY309 GLU310 ARG311 LEU312 LEU313 GLY314 LYS315 TYR316 MET317 MET318 GLU319 ASN320 GLU321 ASN322 ALA323 PRO324 LEU325 TYR326 PHE327 LEU328 TYR329 GLN330 TYR331 PRO332 SER333 GLU334 ALA335 LYS336 PRO337 PHE338 TYR339 ILE340 MET341 LYS342 TYR343 ASP344 ASN345 LYS346 PRO347 GLU348 ILE349 CYS350 ARG351 ALA352 PHE353 ASP354 LEU355 GLU356 TYR357 ARG358 GLY359 VAL360 GLU361 ILE362 SER363 SER364 GLY365 GLY366 GLN367 ARG368 GLU369 HIS370 ARG371 HIS372 ASP373 ILE374 LEU375 VAL376 GLU377 GLN378 ILE379 LYS380 GLU381 LYS382 GLY383 LEU384 ASN385 PRO386 GLU387 SER388 PHE389 GLU390 PHE391 TYR392 LEU393 LYS394 ALA395 PHE396 ARG397 TYR398 GLY399 MET400 PRO401 PRO402 HIS403 GLY404 GLY405 PHE406 GLY407 LEU408 GLY409 ALA410 GLU411 ARG412 LEU413 ILE414 LYS415 GLN416 MET417 LEU418 ASP419 LEU420 PRO421 ASN422 ILE423 ARG424 GLU425 VAL426 ILE427 LEU428 PHE429 PRO430 ARG431 ASP432 ARG433 ARG434 ARG435 LEU436 THR437 PRO438 |
Unit 2 | MET1 TYR2 ARG3 THR4 HIS5 TYR6 SER7 SER8 GLU9 ILE10 THR11 GLU12 GLU13 LEU14 ASN15 GLY16 GLN17 LYS18 VAL19 LYS20 VAL21 ALA22 GLY23 TRP24 VAL25 TRP26 GLU27 VAL28 LYS29 ASP30 LEU31 GLY32 GLY33 ILE34 LYS35 PHE36 LEU37 TRP38 ILE39 ARG40 ASP41 ARG42 ASP43 GLY44 ILE45 VAL46 GLN47 ILE48 THR49 ALA50 PRO51 LYS52 LYS53 LYS54 VAL55 ASP56 PRO57 GLU58 LEU59 PHE60 LYS61 LEU62 ILE63 PRO64 LYS65 LEU66 ARG67 SER68 GLU69 ASP70 VAL71 VAL72 ALA73 VAL74 GLU75 GLY76 VAL77 VAL78 ASN79 PHE80 THR81 PRO82 LYS83 ALA84 LYS85 LEU86 GLY87 PHE88 GLU89 ILE90 LEU91 PRO92 GLU93 LYS94 ILE95 VAL96 VAL97 LEU98 ASN99 ARG100 ALA101 GLU102 THR103 PRO104 LEU105 PRO106 LEU107 ASP108 PRO109 THR110 GLY111 LYS112 VAL113 LYS114 ALA115 GLU116 LEU117 ASP118 THR119 ARG120 LEU121 ASP122 ASN123 ARG124 PHE125 MET126 ASP127 LEU128 ARG129 ARG130 PRO131 GLU132 VAL133 MET134 ALA135 ILE136 PHE137 LYS138 ILE139 ARG140 SER141 SER142 VAL143 PHE144 LYS145 ALA146 VAL147 ARG148 ASP149 PHE150 PHE151 HIS152 GLU153 ASN154 GLY155 PHE156 ILE157 GLU158 ILE159 HIS160 THR161 PRO162 LYS163 ILE164 ILE165 ALA166 THR167 ALA168 THR169 GLU170 GLY171 GLY172 THR173 GLU174 LEU175 PHE176 PRO177 MET178 LYS179 TYR180 PHE181 GLU182 GLU183 ASP184 ALA185 PHE186 LEU187 ALA188 GLN189 SER190 PRO191 GLN192 LEU193 TYR194 LYS195 GLN196 ILE197 MET198 MET199 ALA200 SER201 GLY202 LEU203 ASP204 ARG205 VAL206 TYR207 GLU208 ILE209 ALA210 PRO211 ILE212 PHE213 ARG214 ALA215 GLU216 GLU217 HIS218 ASN219 THR220 THR221 ARG222 HIS223 LEU224 ASN225 GLU226 ALA227 TRP228 SER229 ILE230 ASP231 SER232 GLU233 MET234 ALA235 PHE236 ILE237 GLU238 ASP239 GLU240 GLU241 GLU242 VAL243 MET244 SER245 PHE246 LEU247 GLU248 ARG249 LEU250 VAL251 ALA252 HIS253 ALA254 ILE255 ASN256 TYR257 VAL258 ARG259 GLU260 HIS261 ASN262 ALA263 LYS264 GLU265 LEU266 ASP267 ILE268 LEU269 ASN270 PHE271 GLU272 LEU273 GLU274 GLU275 PRO276 LYS277 LEU278 PRO279 PHE280 PRO281 ARG282 VAL283 SER284 TYR285 ASP286 LYS287 ALA288 LEU289 GLU290 ILE291 LEU292 GLY293 ASP294 LEU295 GLY296 LYS297 GLU298 ILE299 PRO300 TRP301 GLY302 GLU303 ASP304 ILE305 ASP306 THR307 GLU308 GLY309 GLU310 ARG311 LEU312 LEU313 GLY314 LYS315 TYR316 MET317 MET318 GLU319 ASN320 GLU321 ASN322 ALA323 PRO324 LEU325 TYR326 PHE327 LEU328 TYR329 GLN330 TYR331 PRO332 SER333 GLU334 ALA335 LYS336 PRO337 PHE338 TYR339 ILE340 MET341 LYS342 TYR343 ASP344 ASN345 LYS346 PRO347 GLU348 ILE349 CYS350 ARG351 ALA352 PHE353 ASP354 LEU355 GLU356 TYR357 ARG358 GLY359 VAL360 GLU361 ILE362 SER363 SER364 GLY365 GLY366 GLN367 ARG368 GLU369 HIS370 ARG371 HIS372 ASP373 ILE374 LEU375 VAL376 GLU377 GLN378 ILE379 LYS380 GLU381 LYS382 GLY383 LEU384 ASN385 PRO386 GLU387 SER388 PHE389 GLU390 PHE391 TYR392 LEU393 LYS394 ALA395 PHE396 ARG397 TYR398 GLY399 MET400 PRO401 PRO402 HIS403 GLY404 GLY405 PHE406 GLY407 LEU408 GLY409 ALA410 GLU411 ARG412 LEU413 ILE414 LYS415 GLN416 MET417 LEU418 ASP419 LEU420 PRO421 ASN422 ILE423 ARG424 GLU425 VAL426 ILE427 LEU428 PHE429 PRO430 ARG431 ASP432 ARG433 ARG434 ARG435 LEU436 THR437 PRO438 |
Unit 3 | AMO439 |
Unit 4 | ATP1039 MG1040 MG1041 MG1042 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |