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Sequence, Chains, Asymmetric and Biological Units

Title RNA POLYMERASE ALPHA C-TERMINAL DOMAIN (E. COLI) AND SIGMA R (T. AQ. MUTANT) BOUND TO (UP,-35 ELEMENT) DNA
Keywords PROTEIN-PROTEIN INTERACTIONS, PROTEIN-DNA INTERACTIONS, TRAN INITIATION, GENE REGULATION-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3N97     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA POLYMERASE SIGMA FACTOR  A 53 433 0
2  Protein   RNA POLYMERASE SIGMA FACTOR  D 50 410 0
3  Protein   DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA  B 75 584 0
4  Protein   DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA  C 74 579 0
5  Other macromolecule   DNA (5'- D(*TP*GP*GP*AP*AP*AP*AP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*CP*AP 3')  M 22 456 0
6  Other macromolecule   DNA (5'- D(*CP*CP*AP*TP*GP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*TP 3')  N 21 419 0
7  Ligand   DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA  C 1 0 4
8 Water     1 0 1
total       297 2881 5
Proteins
Unit 1 SER374 LYS375 LEU376 SER377 GLU378 ARG379 GLU380 ALA381 MET382 VAL383 LEU384 LYS385 MET386 ARG387 LYS388 GLY389 LEU390 ILE391 ASP392 GLY393 ARG394 GLU395 HIS396 THR397 LEU398 GLU399 GLU400 VAL401 GLY402 ALA403 TYR404 PHE405 GLY406 VAL407 THR408 ARG409 GLU410 ARG411 ILE412 ARG413 GLN414 ILE415 GLU416 ASN417 LYS418 ALA419 LEU420 ARG421 LYS422 LEU423 ARG424 HIS425 PRO426
Unit 2 LYS375 LEU376 SER377 GLU378 ARG379 GLU380 ALA381 MET382 VAL383 LEU384 LYS385 MET386 ARG387 LYS388 GLY389 LEU390 ILE391 ASP392 GLY393 ARG394 GLU395 HIS396 THR397 LEU398 GLU399 GLU400 VAL401 GLY402 ALA403 TYR404 PHE405 GLY406 VAL407 THR408 ARG409 GLU410 ARG411 ILE412 ARG413 GLN414 ILE415 GLU416 ASN417 LYS418 ALA419 LEU420 ARG421 LYS422 LEU423 ARG424
Unit 3 ASP250 PRO251 ILE252 LEU253 LEU254 ARG255 PRO256 VAL257 ASP258 ASP259 LEU260 GLU261 LEU262 THR263 VAL264 ARG265 SER266 ALA267 ASN268 CYS269 LEU270 LYS271 ALA272 GLU273 ALA274 ILE275 HIS276 TYR277 ILE278 GLY279 ASP280 LEU281 VAL282 GLN283 ARG284 THR285 GLU286 VAL287 GLU288 LEU289 LEU290 LYS291 THR292 PRO293 ASN294 LEU295 GLY296 LYS297 LYS298 SER299 LEU300 THR301 GLU302 ILE303 LYS304 ASP305 VAL306 LEU307 ALA308 SER309 ARG310 GLY311 LEU312 SER313 LEU314 GLY315 MET316 ARG317 LEU318 GLU319 ASN320 TRP321 PRO322 PRO323 ALA324
Unit 4 ASP250 PRO251 ILE252 LEU253 LEU254 ARG255 PRO256 VAL257 ASP258 ASP259 LEU260 GLU261 LEU262 THR263 VAL264 ARG265 SER266 ALA267 ASN268 CYS269 LEU270 LYS271 ALA272 GLU273 ALA274 ILE275 HIS276 TYR277 ILE278 GLY279 ASP280 LEU281 VAL282 GLN283 ARG284 THR285 GLU286 VAL287 GLU288 LEU289 LEU290 LYS291 THR292 PRO293 ASN294 LEU295 GLY296 LYS297 LYS298 SER299 LEU300 THR301 GLU302 ILE303 LYS304 ASP305 VAL306 LEU307 ALA308 SER309 ARG310 GLY311 LEU312 SER313 LEU314 GLY315 MET316 ARG317 LEU318 GLU319 ASN320 TRP321 PRO322 PRO323
Other macromolecules
Unit 5 DT1 DG2 DG3 DA4 DA5 DA6 DA7 DA8 DA9 DG10 DT11 DA12 DC13 DT14 DT15 DG16 DA17 DC18 DA19 DT20 DG21 DG22
Unit 6 DC1 DC2 DA3 DT4 DG5 DT6 DC7 DA8 DA9 DG10 DT11 DA12 DC13 DT14 DT15 DT16 DT17 DT18 DT19 DC20 DC21
Ligands
Unit 7 ACT1
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany