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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF EPHA2 ECTODOMAIN IN COMPLEX WITH EPHRIN
Keywords ECTODOMAIN, RECEPTOR-LIGAND COMPLEX, RECEPTOR-RECEPTOR INTER TRANSFERASE RECEPTOR-SIGNALLING PROTEIN COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3MX0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   EPHRIN TYPE-A RECEPTOR 2  A 406 3080 0
2  Protein   EPHRIN-A5  B 138 1151 0
3  Protein   EPHRIN TYPE-A RECEPTOR 2  C 406 3080 0
4  Protein   EPHRIN-A5  D 138 1151 0
5  Ligand    E 3 0 42
6  Ligand    F 3 0 42
7  Ligand   EPHRIN TYPE-A RECEPTOR 2  A 1 0 14
8  Ligand   EPHRIN TYPE-A RECEPTOR 2  C 1 0 14
total       1096 8462 112

Proteins
Unit 1 LYS27 GLU28 VAL29 VAL30 LEU31 LEU32 ASP33 PHE34 ALA35 ALA36 ALA37 GLY38 GLY39 GLU40 LEU41 GLY42 TRP43 LEU44 THR45 HIS46 PRO47 TYR48 GLY49 LYS50 GLY51 TRP52 ASP53 LEU54 MET55 GLN56 ASN57 ILE58 MET59 ASN60 ASP61 MET62 PRO63 ILE64 TYR65 MET66 TYR67 SER68 VAL69 CYS70 ASN71 VAL72 MET73 SER74 GLY75 ASP76 GLN77 ASP78 ASN79 TRP80 LEU81 ARG82 THR83 ASN84 TRP85 VAL86 TYR87 ARG88 GLY89 GLU90 ALA91 GLU92 ARG93 ILE94 PHE95 ILE96 GLU97 LEU98 LYS99 PHE100 THR101 VAL102 ARG103 ASP104 CYS105 ASN106 SER107 PHE108 PRO109 GLY110 GLY111 ALA112 SER113 SER114 CYS115 LYS116 GLU117 THR118 PHE119 ASN120 LEU121 TYR122 TYR123 ALA124 GLU125 SER126 ASP127 LEU128 ASP129 TYR130 GLY131 THR132 ASN133 PHE134 GLN135 LYS136 ARG137 LEU138 PHE139 THR140 LYS141 ILE142 ASP143 THR144 ILE145 ALA146 PRO147 ASP148 GLU149 ILE150 THR151 VAL152 SER153 SER154 ASP155 PHE156 GLU157 ALA158 ARG159 HIS160 VAL161 LYS162 LEU163 ASN164 VAL165 GLU166 GLU167 ARG168 SER169 VAL170 GLY171 PRO172 LEU173 THR174 ARG175 LYS176 GLY177 PHE178 TYR179 LEU180 ALA181 PHE182 GLN183 ASP184 ILE185 GLY186 ALA187 CYS188 VAL189 ALA190 LEU191 LEU192 SER193 VAL194 ARG195 VAL196 TYR197 TYR198 LYS199 LYS200 CYS201 PRO202 GLU203 LEU204 LEU205 GLN206 GLY207 LEU208 ALA209 HIS210 PHE211 PRO212 GLU213 THR214 ILE215 ALA216 GLY217 SER218 ASP219 ALA220 PRO221 SER222 LEU223 ALA224 THR225 VAL226 ALA227 GLY228 THR229 CYS230 VAL231 ASP232 HIS233 ALA234 VAL235 VAL236 PRO237 PRO238 GLU241 GLU242 PRO243 ARG244 MET245 HIS246 CYS247 ALA248 VAL249 ASP250 GLY251 GLU252 TRP253 LEU254 VAL255 PRO256 ILE257 GLY258 GLN259 CYS260 LEU261 CYS262 GLN263 ALA264 GLY265 TYR266 GLU267 LYS268 VAL269 GLU270 ASP271 ALA272 CYS273 GLN274 ALA275 CYS276 SER277 PRO278 GLY279 PHE280 PHE281 LYS282 PHE283 GLU284 ALA285 SER286 GLU287 SER288 PRO289 CYS290 LEU291 GLU292 CYS293 PRO294 GLU295 HIS296 THR297 LEU298 PRO299 SER300 PRO301 GLU302 GLY303 ALA304 THR305 SER306 CYS307 GLU308 CYS309 GLU310 GLU311 GLY312 PHE313 PHE314 ARG315 ALA316 PRO317 GLN318 ASP319 PRO320 ALA321 SER322 MET323 PRO324 CYS325 THR326 ARG327 PRO328 PRO329 SER330 ALA331 PRO332 HIS333 TYR334 LEU335 THR336 ALA337 VAL338 GLY339 MET340 GLY341 ALA342 LYS343 VAL344 GLU345 LEU346 ARG347 TRP348 THR349 PRO350 PRO351 GLN352 ASP353 SER354 GLY355 GLY356 ARG357 GLU358 ASP359 ILE360 VAL361 TYR362 SER363 VAL364 THR365 CYS366 GLU367 GLN368 CYS369 TRP370 PRO371 SER373 GLY374 GLU375 CYS376 GLY377 PRO378 CYS379 GLU380 ALA381 SER382 VAL383 ARG384 TYR385 SER386 GLU387 PRO388 PRO389 HIS390 GLY391 LEU392 THR393 ARG394 THR395 SER396 VAL397 THR398 VAL399 SER400 ASP401 LEU402 GLU403 PRO404 HIS405 MET406 ASN407 TYR408 THR409 PHE410 THR411 VAL412 GLU413 ALA414 ARG415 ASN416 GLY417 VAL418 SER419 GLY420 LEU421 VAL422 THR423 SER424 ARG425 SER426 PHE427 ARG428 THR429 ALA430 SER431 VAL432 SER433 ILE434 ASN435
Unit 2 VAL28 ALA29 ASP30 ARG31 TYR32 ALA33 VAL34 TYR35 TRP36 ASN37 SER38 SER39 ASN40 PRO41 ARG42 PHE43 GLN44 ARG45 GLY46 ASP47 TYR48 HIS49 ILE50 ASP51 VAL52 CYS53 ILE54 ASN55 ASP56 TYR57 LEU58 ASP59 VAL60 PHE61 CYS62 PRO63 HIS64 TYR65 GLU66 ASP67 SER68 VAL69 PRO70 GLU71 ASP72 LYS73 THR74 GLU75 ARG76 TYR77 VAL78 LEU79 TYR80 MET81 VAL82 ASN83 PHE84 ASP85 GLY86 TYR87 SER88 ALA89 CYS90 ASP91 HIS92 THR93 SER94 LYS95 GLY96 PHE97 LYS98 ARG99 TRP100 GLU101 CYS102 ASN103 ARG104 PRO105 HIS106 SER107 PRO108 ASN109 GLY110 PRO111 LEU112 LYS113 PHE114 SER115 GLU116 LYS117 PHE118 GLN119 LEU120 PHE121 THR122 PRO123 PHE124 SER125 LEU126 GLY127 PHE128 GLU129 PHE130 ARG131 PRO132 GLY133 ARG134 GLU135 TYR136 PHE137 TYR138 ILE139 SER140 SER141 ALA142 ILE143 PRO144 ASP145 ASN146 GLY147 ARG148 ARG149 SER150 CYS151 LEU152 LYS153 LEU154 LYS155 VAL156 PHE157 VAL158 ARG159 PRO160 THR161 ASN162 SER163 CYS164 MET165
Unit 3 LYS27 GLU28 VAL29 VAL30 LEU31 LEU32 ASP33 PHE34 ALA35 ALA36 ALA37 GLY38 GLY39 GLU40 LEU41 GLY42 TRP43 LEU44 THR45 HIS46 PRO47 TYR48 GLY49 LYS50 GLY51 TRP52 ASP53 LEU54 MET55 GLN56 ASN57 ILE58 MET59 ASN60 ASP61 MET62 PRO63 ILE64 TYR65 MET66 TYR67 SER68 VAL69 CYS70 ASN71 VAL72 MET73 SER74 GLY75 ASP76 GLN77 ASP78 ASN79 TRP80 LEU81 ARG82 THR83 ASN84 TRP85 VAL86 TYR87 ARG88 GLY89 GLU90 ALA91 GLU92 ARG93 ILE94 PHE95 ILE96 GLU97 LEU98 LYS99 PHE100 THR101 VAL102 ARG103 ASP104 CYS105 ASN106 SER107 PHE108 PRO109 GLY110 GLY111 ALA112 SER113 SER114 CYS115 LYS116 GLU117 THR118 PHE119 ASN120 LEU121 TYR122 TYR123 ALA124 GLU125 SER126 ASP127 LEU128 ASP129 TYR130 GLY131 THR132 ASN133 PHE134 GLN135 LYS136 ARG137 LEU138 PHE139 THR140 LYS141 ILE142 ASP143 THR144 ILE145 ALA146 PRO147 ASP148 GLU149 ILE150 THR151 VAL152 SER153 SER154 ASP155 PHE156 GLU157 ALA158 ARG159 HIS160 VAL161 LYS162 LEU163 ASN164 VAL165 GLU166 GLU167 ARG168 SER169 VAL170 GLY171 PRO172 LEU173 THR174 ARG175 LYS176 GLY177 PHE178 TYR179 LEU180 ALA181 PHE182 GLN183 ASP184 ILE185 GLY186 ALA187 CYS188 VAL189 ALA190 LEU191 LEU192 SER193 VAL194 ARG195 VAL196 TYR197 TYR198 LYS199 LYS200 CYS201 PRO202 GLU203 LEU204 LEU205 GLN206 GLY207 LEU208 ALA209 HIS210 PHE211 PRO212 GLU213 THR214 ILE215 ALA216 GLY217 SER218 ASP219 ALA220 PRO221 SER222 LEU223 ALA224 THR225 VAL226 ALA227 GLY228 THR229 CYS230 VAL231 ASP232 HIS233 ALA234 VAL235 VAL236 PRO237 PRO238 GLU241 GLU242 PRO243 ARG244 MET245 HIS246 CYS247 ALA248 VAL249 ASP250 GLY251 GLU252 TRP253 LEU254 VAL255 PRO256 ILE257 GLY258 GLN259 CYS260 LEU261 CYS262 GLN263 ALA264 GLY265 TYR266 GLU267 LYS268 VAL269 GLU270 ASP271 ALA272 CYS273 GLN274 ALA275 CYS276 SER277 PRO278 GLY279 PHE280 PHE281 LYS282 PHE283 GLU284 ALA285 SER286 GLU287 SER288 PRO289 CYS290 LEU291 GLU292 CYS293 PRO294 GLU295 HIS296 THR297 LEU298 PRO299 SER300 PRO301 GLU302 GLY303 ALA304 THR305 SER306 CYS307 GLU308 CYS309 GLU310 GLU311 GLY312 PHE313 PHE314 ARG315 ALA316 PRO317 GLN318 ASP319 PRO320 ALA321 SER322 MET323 PRO324 CYS325 THR326 ARG327 PRO328 PRO329 SER330 ALA331 PRO332 HIS333 TYR334 LEU335 THR336 ALA337 VAL338 GLY339 MET340 GLY341 ALA342 LYS343 VAL344 GLU345 LEU346 ARG347 TRP348 THR349 PRO350 PRO351 GLN352 ASP353 SER354 GLY355 GLY356 ARG357 GLU358 ASP359 ILE360 VAL361 TYR362 SER363 VAL364 THR365 CYS366 GLU367 GLN368 CYS369 TRP370 PRO371 SER373 GLY374 GLU375 CYS376 GLY377 PRO378 CYS379 GLU380 ALA381 SER382 VAL383 ARG384 TYR385 SER386 GLU387 PRO388 PRO389 HIS390 GLY391 LEU392 THR393 ARG394 THR395 SER396 VAL397 THR398 VAL399 SER400 ASP401 LEU402 GLU403 PRO404 HIS405 MET406 ASN407 TYR408 THR409 PHE410 THR411 VAL412 GLU413 ALA414 ARG415 ASN416 GLY417 VAL418 SER419 GLY420 LEU421 VAL422 THR423 SER424 ARG425 SER426 PHE427 ARG428 THR429 ALA430 SER431 VAL432 SER433 ILE434 ASN435
Unit 4 VAL28 ALA29 ASP30 ARG31 TYR32 ALA33 VAL34 TYR35 TRP36 ASN37 SER38 SER39 ASN40 PRO41 ARG42 PHE43 GLN44 ARG45 GLY46 ASP47 TYR48 HIS49 ILE50 ASP51 VAL52 CYS53 ILE54 ASN55 ASP56 TYR57 LEU58 ASP59 VAL60 PHE61 CYS62 PRO63 HIS64 TYR65 GLU66 ASP67 SER68 VAL69 PRO70 GLU71 ASP72 LYS73 THR74 GLU75 ARG76 TYR77 VAL78 LEU79 TYR80 MET81 VAL82 ASN83 PHE84 ASP85 GLY86 TYR87 SER88 ALA89 CYS90 ASP91 HIS92 THR93 SER94 LYS95 GLY96 PHE97 LYS98 ARG99 TRP100 GLU101 CYS102 ASN103 ARG104 PRO105 HIS106 SER107 PRO108 ASN109 GLY110 PRO111 LEU112 LYS113 PHE114 SER115 GLU116 LYS117 PHE118 GLN119 LEU120 PHE121 THR122 PRO123 PHE124 SER125 LEU126 GLY127 PHE128 GLU129 PHE130 ARG131 PRO132 GLY133 ARG134 GLU135 TYR136 PHE137 TYR138 ILE139 SER140 SER141 ALA142 ILE143 PRO144 ASP145 ASN146 GLY147 ARG148 ARG149 SER150 CYS151 LEU152 LYS153 LEU154 LYS155 VAL156 PHE157 VAL158 ARG159 PRO160 THR161 ASN162 SER163 CYS164 MET165

Ligands
Unit 5 NAG1 NAG2 NAG3
Unit 6 NAG1 NAG2 NAG3
Unit 7 NAG501
Unit 8 NAG501

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany