3MBC - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF MONOMERIC ISOCITRATE DEHYDROGENASE FROM CORYNEBACTERIUM GLUTAMICUM IN COMPLEX WITH NADP
• Keywords: HOLOENZYME, APOENZYME, OPEN CONFORMATION, NADP, GLYOXYLATE B MAGNESIUM, METAL-BINDING, OXIDOREDUCTASE, TRICARBOXYLIC ACI
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3MBC	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ISOCITRATE DEHYDROGENASE [NADP]	A	735	5608	0
2	Protein	ISOCITRATE DEHYDROGENASE [NADP]	B	735	5596	0
3	Ligand	ISOCITRATE DEHYDROGENASE [NADP]	A	2	0	32
4	Ligand	ISOCITRATE DEHYDROGENASE [NADP]	B	1	0	1
5	Water			796	0	796
total				2269	11204	829

Proteins

Unit 1

ALA 2 LYS 3 ILE 4 ILE 5 TRP 6 THR 7 ARG 8 THR 9 ASP 10 GLU 11 ALA 12 PRO 13 LEU 14 LEU 15 ALA 16 THR 17 TYR 18 SER 19 LEU 20 LYS 21 PRO 22 VAL 23 VAL 24 GLU 25 ALA 26 PHE 27 ALA 28 ALA 29 THR 30 ALA 31 GLY 32 ILE 33 GLU 34 VAL 35 GLU 36 THR 37 ARG 38 ASP 39 ILE 40 SER 41 LEU 42 ALA 43 GLY 44 ARG 45 ILE 46 LEU 47 ALA 48 GLN 49 PHE 50 PRO 51 GLU 52 ARG 53 LEU 54 THR 55 GLU 56 ASP 57 GLN 58 LYS 59 VAL 60 GLY 61 ASN 62 ALA 63 LEU 64 ALA 65 GLU 66 LEU 67 GLY 68 GLU 69 LEU 70 ALA 71 LYS 72 THR 73 PRO 74 GLU 75 ALA 76 ASN 77 ILE 78 ILE 79 LYS 80 LEU 81 PRO 82 ASN 83 ILE 84 SER 85 ALA 86 SER 87 VAL 88 PRO 89 GLN 90 LEU 91 LYS 92 ALA 93 ALA 94 ILE 95 LYS 96 GLU 97 LEU 98 GLN 99 ASP 100 GLN 101 GLY 102 TYR 103 ASP 104 ILE 105 PRO 106 GLU 107 LEU 108 PRO 109 ASP 110 ASN 111 ALA 112 THR 113 THR 114 ASP 115 GLU 116 GLU 117 LYS 118 ASP 119 ILE 120 LEU 121 ALA 122 ARG 123 TYR 124 ASN 125 ALA 126 VAL 127 LYS 128 GLY 129 SER 130 ALA 131 VAL 132 ASN 133 PRO 134 VAL 135 LEU 136 ARG 137 GLU 138 GLY 139 ASN 140 SER 141 ASP 142 ARG 143 ARG 144 ALA 145 PRO 146 ILE 147 ALA 148 VAL 149 LYS 150 ASN 151 PHE 152 VAL 153 LYS 154 LYS 155 PHE 156 PRO 157 HIS 158 ARG 159 MET 160 GLY 161 GLU 162 TRP 163 SER 164 ALA 165 ASP 166 SER 167 LYS 168 THR 169 ASN 170 VAL 171 ALA 172 THR 173 MET 174 ASP 175 ALA 176 ASN 177 ASP 178 PHE 179 ARG 180 HIS 181 ASN 182 GLU 183 LYS 184 SER 185 ILE 186 ILE 187 LEU 188 ASP 189 ALA 190 ALA 191 ASP 192 GLU 193 VAL 194 GLN 195 ILE 196 LYS 197 HIS 198 ILE 199 ALA 200 ALA 201 ASP 202 GLY 203 THR 204 GLU 205 THR 206 ILE 207 LEU 208 LYS 209 ASP 210 SER 211 LEU 212 LYS 213 LEU 214 LEU 215 GLU 216 GLY 217 GLU 218 VAL 219 LEU 220 ASP 221 GLY 222 THR 223 VAL 224 LEU 225 SER 226 ALA 227 LYS 228 ALA 229 LEU 230 ASP 231 ALA 232 PHE 233 LEU 234 LEU 235 GLU 236 GLN 237 VAL 238 ALA 239 ARG 240 ALA 241 LYS 242 ALA 243 GLU 244 GLY 245 ILE 246 LEU 247 PHE 248 SER 249 ALA 250 HIS 251 LEU 252 LYS 253 ALA 254 THR 255 MET 256 MET 257 LYS 258 VAL 259 SER 260 ASP 261 PRO 262 ILE 263 ILE 264 PHE 265 GLY 266 HIS 267 VAL 268 VAL 269 ARG 270 ALA 271 TYR 272 PHE 273 ALA 274 ASP 275 VAL 276 PHE 277 ALA 278 GLN 279 TYR 280 GLY 281 GLU 282 GLN 283 LEU 284 LEU 285 ALA 286 ALA 287 GLY 288 LEU 289 ASN 290 GLY 291 GLU 292 ASN 293 GLY 294 LEU 295 ALA 296 ALA 297 ILE 298 LEU 299 SER 300 GLY 301 LEU 302 GLU 303 SER 304 LEU 305 ASP 306 ASN 307 GLY 308 GLU 309 GLU 310 ILE 311 LYS 312 ALA 313 ALA 314 PHE 315 GLU 316 LYS 317 GLY 318 LEU 319 GLU 320 ASP 321 GLY 322 PRO 323 ASP 324 LEU 325 ALA 326 MET 327 VAL 328 ASN 329 SER 330 ALA 331 ARG 332 GLY 333 ILE 334 THR 335 ASN 336 LEU 337 HIS 338 VAL 339 PRO 340 SER 341 ASP 342 VAL 343 ILE 344 VAL 345 ASP 346 ALA 347 SER 348 MET 349 PRO 350 ALA 351 MET 352 ILE 353 ARG 354 THR 355 SER 356 GLY 357 HIS 358 MET 359 TRP 360 ASN 361 LYS 362 ASP 363 ASP 364 GLN 365 GLU 366 GLN 367 ASP 368 THR 369 LEU 370 ALA 371 ILE 372 ILE 373 PRO 374 ASP 375 SER 376 SER 377 TYR 378 ALA 379 GLY 380 VAL 381 TYR 382 GLN 383 THR 384 VAL 385 ILE 386 GLU 387 ASP 388 CYS 389 ARG 390 LYS 391 ASN 392 GLY 393 ALA 394 PHE 395 ASP 396 PRO 397 THR 398 THR 399 MET 400 GLY 401 THR 402 VAL 403 PRO 404 ASN 405 VAL 406 GLY 407 LEU 408 MET 409 ALA 410 GLN 411 LYS 412 ALA 413 GLU 414 GLU 415 TYR 416 GLY 417 SER 418 HIS 419 ASP 420 LYS 421 THR 422 PHE 423 ARG 424 ILE 425 GLU 426 ALA 427 ASP 428 GLY 429 VAL 430 VAL 431 GLN 432 VAL 433 VAL 434 SER 435 SER 436 ASN 437 GLY 438 ASP 439 VAL 440 LEU 441 ILE 442 GLU 443 HIS 444 ASP 445 VAL 446 GLU 447 ALA 448 ASN 449 ASP 450 ILE 451 TRP 452 ARG 453 ALA 454 CYS 455 GLN 456 VAL 457 LYS 458 ASP 459 ALA 460 PRO 461 ILE 462 GLN 463 ASP 464 TRP 465 VAL 466 LYS 467 LEU 468 ALA 469 VAL 470 THR 471 ARG 472 SER 473 ARG 474 LEU 475 SER 476 GLY 477 MET 478 PRO 479 ALA 480 VAL 481 PHE 482 TRP 483 LEU 484 ASP 485 PRO 486 GLU 487 ARG 488 ALA 489 HIS 490 ASP 491 ARG 492 ASN 493 LEU 494 ALA 495 SER 496 LEU 497 VAL 498 GLU 499 LYS 500 TYR 501 LEU 502 ALA 503 ASP 504 HIS 505 ASP 506 THR 507 GLU 508 GLY 509 LEU 510 ASP 511 ILE 512 GLN 513 ILE 514 LEU 515 SER 516 PRO 517 VAL 518 GLU 519 ALA 520 THR 521 GLN 522 LEU 523 SER 524 ILE 525 ASP 526 ARG 527 ILE 528 ARG 529 ARG 530 GLY 531 GLU 532 ASP 533 THR 534 ILE 535 SER 536 VAL 537 THR 538 GLY 539 ASN 540 VAL 541 LEU 542 ARG 543 ASP 544 TYR 545 ASN 546 THR 547 ASP 548 LEU 549 PHE 550 PRO 551 ILE 552 LEU 553 GLU 554 LEU 555 GLY 556 THR 557 SER 558 ALA 559 LYS 560 MET 561 LEU 562 SER 563 VAL 564 VAL 565 PRO 566 LEU 567 MET 568 ALA 569 GLY 570 GLY 571 GLY 572 LEU 573 PHE 574 GLU 575 THR 576 GLY 577 ALA 578 GLY 579 GLY 580 SER 581 ALA 582 PRO 583 LYS 584 HIS 585 VAL 586 GLN 587 GLN 588 VAL 589 GLN 590 GLU 591 GLU 592 ASN 593 HIS 594 LEU 595 ARG 596 TRP 597 ASP 598 SER 599 LEU 600 GLY 601 GLU 602 PHE 603 LEU 604 ALA 605 LEU 606 ALA 607 GLU 608 SER 609 PHE 610 ARG 611 HIS 612 GLU 613 LEU 614 ASN 615 ASN 616 ASN 617 GLY 618 ASN 619 THR 620 LYS 621 ALA 622 GLY 623 VAL 624 LEU 625 ALA 626 ASP 627 ALA 628 LEU 629 ASP 630 LYS 631 ALA 632 THR 633 GLU 634 LYS 635 LEU 636 LEU 637 ASN 638 GLU 639 GLU 640 LYS 641 SER 642 PRO 643 SER 644 ARG 645 LYS 646 VAL 647 GLY 648 GLU 649 ILE 650 ASP 651 ASN 652 ARG 653 GLY 654 SER 655 HIS 656 PHE 657 TRP 658 LEU 659 THR 660 LYS 661 PHE 662 TRP 663 ALA 664 ASP 665 GLU 666 LEU 667 ALA 668 ALA 669 GLN 670 THR 671 GLU 672 ASP 673 ALA 674 ASP 675 LEU 676 ALA 677 ALA 678 THR 679 PHE 680 ALA 681 PRO 682 VAL 683 ALA 684 GLU 685 ALA 686 LEU 687 ASN 688 THR 689 GLY 690 ALA 691 ALA 692 ASP 693 ILE 694 ASP 695 ALA 696 ALA 697 LEU 698 LEU 699 ALA 700 VAL 701 GLN 702 GLY 703 GLY 704 ALA 705 THR 706 ASP 707 LEU 708 GLY 709 GLY 710 TYR 711 TYR 712 SER 713 PRO 714 ASN 715 GLU 716 GLU 717 LYS 718 LEU 719 THR 720 ASN 721 ILE 722 MET 723 ARG 724 PRO 725 VAL 726 ALA 727 GLN 728 PHE 729 ASN 730 GLU 731 ILE 732 VAL 733 ASP 734 ALA 735 LEU 736

Unit 2

ALA 2 LYS 3 ILE 4 ILE 5 TRP 6 THR 7 ARG 8 THR 9 ASP 10 GLU 11 ALA 12 PRO 13 LEU 14 LEU 15 ALA 16 THR 17 TYR 18 SER 19 LEU 20 LYS 21 PRO 22 VAL 23 VAL 24 GLU 25 ALA 26 PHE 27 ALA 28 ALA 29 THR 30 ALA 31 GLY 32 ILE 33 GLU 34 VAL 35 GLU 36 THR 37 ARG 38 ASP 39 ILE 40 SER 41 LEU 42 ALA 43 GLY 44 ARG 45 ILE 46 LEU 47 ALA 48 GLN 49 PHE 50 PRO 51 GLU 52 ARG 53 LEU 54 THR 55 GLU 56 ASP 57 GLN 58 LYS 59 VAL 60 GLY 61 ASN 62 ALA 63 LEU 64 ALA 65 GLU 66 LEU 67 GLY 68 GLU 69 LEU 70 ALA 71 LYS 72 THR 73 PRO 74 GLU 75 ALA 76 ASN 77 ILE 78 ILE 79 LYS 80 LEU 81 PRO 82 ASN 83 ILE 84 SER 85 ALA 86 SER 87 VAL 88 PRO 89 GLN 90 LEU 91 LYS 92 ALA 93 ALA 94 ILE 95 LYS 96 GLU 97 LEU 98 GLN 99 ASP 100 GLN 101 GLY 102 TYR 103 ASP 104 ILE 105 PRO 106 GLU 107 LEU 108 PRO 109 ASP 110 ASN 111 ALA 112 THR 113 THR 114 ASP 115 GLU 116 GLU 117 LYS 118 ASP 119 ILE 120 LEU 121 ALA 122 ARG 123 TYR 124 ASN 125 ALA 126 VAL 127 LYS 128 GLY 129 SER 130 ALA 131 VAL 132 ASN 133 PRO 134 VAL 135 LEU 136 ARG 137 GLU 138 GLY 139 ASN 140 SER 141 ASP 142 ARG 143 ARG 144 ALA 145 PRO 146 ILE 147 ALA 148 VAL 149 LYS 150 ASN 151 PHE 152 VAL 153 LYS 154 LYS 155 PHE 156 PRO 157 HIS 158 ARG 159 MET 160 GLY 161 GLU 162 TRP 163 SER 164 ALA 165 ASP 166 SER 167 LYS 168 THR 169 ASN 170 VAL 171 ALA 172 THR 173 MET 174 ASP 175 ALA 176 ASN 177 ASP 178 PHE 179 ARG 180 HIS 181 ASN 182 GLU 183 LYS 184 SER 185 ILE 186 ILE 187 LEU 188 ASP 189 ALA 190 ALA 191 ASP 192 GLU 193 VAL 194 GLN 195 ILE 196 LYS 197 HIS 198 ILE 199 ALA 200 ALA 201 ASP 202 GLY 203 THR 204 GLU 205 THR 206 ILE 207 LEU 208 LYS 209 ASP 210 SER 211 LEU 212 LYS 213 LEU 214 LEU 215 GLU 216 GLY 217 GLU 218 VAL 219 LEU 220 ASP 221 GLY 222 THR 223 VAL 224 LEU 225 SER 226 ALA 227 LYS 228 ALA 229 LEU 230 ASP 231 ALA 232 PHE 233 LEU 234 LEU 235 GLU 236 GLN 237 VAL 238 ALA 239 ARG 240 ALA 241 LYS 242 ALA 243 GLU 244 GLY 245 ILE 246 LEU 247 PHE 248 SER 249 ALA 250 HIS 251 LEU 252 LYS 253 ALA 254 THR 255 MET 256 MET 257 LYS 258 VAL 259 SER 260 ASP 261 PRO 262 ILE 263 ILE 264 PHE 265 GLY 266 HIS 267 VAL 268 VAL 269 ARG 270 ALA 271 TYR 272 PHE 273 ALA 274 ASP 275 VAL 276 PHE 277 ALA 278 GLN 279 TYR 280 GLY 281 GLU 282 GLN 283 LEU 284 LEU 285 ALA 286 ALA 287 GLY 288 LEU 289 ASN 290 GLY 291 GLU 292 ASN 293 GLY 294 LEU 295 ALA 296 ALA 297 ILE 298 LEU 299 SER 300 GLY 301 LEU 302 GLU 303 SER 304 LEU 305 ASP 306 ASN 307 GLY 308 GLU 309 GLU 310 ILE 311 LYS 312 ALA 313 ALA 314 PHE 315 GLU 316 LYS 317 GLY 318 LEU 319 GLU 320 ASP 321 GLY 322 PRO 323 ASP 324 LEU 325 ALA 326 MET 327 VAL 328 ASN 329 SER 330 ALA 331 ARG 332 GLY 333 ILE 334 THR 335 ASN 336 LEU 337 HIS 338 VAL 339 PRO 340 SER 341 ASP 342 VAL 343 ILE 344 VAL 345 ASP 346 ALA 347 SER 348 MET 349 PRO 350 ALA 351 MET 352 ILE 353 ARG 354 THR 355 SER 356 GLY 357 HIS 358 MET 359 TRP 360 ASN 361 LYS 362 ASP 363 ASP 364 GLN 365 GLU 366 GLN 367 ASP 368 THR 369 LEU 370 ALA 371 ILE 372 ILE 373 PRO 374 ASP 375 SER 376 SER 377 TYR 378 ALA 379 GLY 380 VAL 381 TYR 382 GLN 383 THR 384 VAL 385 ILE 386 GLU 387 ASP 388 CYS 389 ARG 390 LYS 391 ASN 392 GLY 393 ALA 394 PHE 395 ASP 396 PRO 397 THR 398 THR 399 MET 400 GLY 401 THR 402 VAL 403 PRO 404 ASN 405 VAL 406 GLY 407 LEU 408 MET 409 ALA 410 GLN 411 LYS 412 ALA 413 GLU 414 GLU 415 TYR 416 GLY 417 SER 418 HIS 419 ASP 420 LYS 421 THR 422 PHE 423 ARG 424 ILE 425 GLU 426 ALA 427 ASP 428 GLY 429 VAL 430 VAL 431 GLN 432 VAL 433 VAL 434 SER 435 SER 436 ASN 437 GLY 438 ASP 439 VAL 440 LEU 441 ILE 442 GLU 443 HIS 444 ASP 445 VAL 446 GLU 447 ALA 448 ASN 449 ASP 450 ILE 451 TRP 452 ARG 453 ALA 454 CYS 455 GLN 456 VAL 457 LYS 458 ASP 459 ALA 460 PRO 461 ILE 462 GLN 463 ASP 464 TRP 465 VAL 466 LYS 467 LEU 468 ALA 469 VAL 470 THR 471 ARG 472 SER 473 ARG 474 LEU 475 SER 476 GLY 477 MET 478 PRO 479 ALA 480 VAL 481 PHE 482 TRP 483 LEU 484 ASP 485 PRO 486 GLU 487 ARG 488 ALA 489 HIS 490 ASP 491 ARG 492 ASN 493 LEU 494 ALA 495 SER 496 LEU 497 VAL 498 GLU 499 LYS 500 TYR 501 LEU 502 ALA 503 ASP 504 HIS 505 ASP 506 THR 507 GLU 508 GLY 509 LEU 510 ASP 511 ILE 512 GLN 513 ILE 514 LEU 515 SER 516 PRO 517 VAL 518 GLU 519 ALA 520 THR 521 GLN 522 LEU 523 SER 524 ILE 525 ASP 526 ARG 527 ILE 528 ARG 529 ARG 530 GLY 531 GLU 532 ASP 533 THR 534 ILE 535 SER 536 VAL 537 THR 538 GLY 539 ASN 540 VAL 541 LEU 542 ARG 543 ASP 544 TYR 545 ASN 546 THR 547 ASP 548 LEU 549 PHE 550 PRO 551 ILE 552 LEU 553 GLU 554 LEU 555 GLY 556 THR 557 SER 558 ALA 559 LYS 560 MET 561 LEU 562 SER 563 VAL 564 VAL 565 PRO 566 LEU 567 MET 568 ALA 569 GLY 570 GLY 571 GLY 572 LEU 573 PHE 574 GLU 575 THR 576 GLY 577 ALA 578 GLY 579 GLY 580 SER 581 ALA 582 PRO 583 LYS 584 HIS 585 VAL 586 GLN 587 GLN 588 VAL 589 GLN 590 GLU 591 GLU 592 ASN 593 HIS 594 LEU 595 ARG 596 TRP 597 ASP 598 SER 599 LEU 600 GLY 601 GLU 602 PHE 603 LEU 604 ALA 605 LEU 606 ALA 607 GLU 608 SER 609 PHE 610 ARG 611 HIS 612 GLU 613 LEU 614 ASN 615 ASN 616 ASN 617 GLY 618 ASN 619 THR 620 LYS 621 ALA 622 GLY 623 VAL 624 LEU 625 ALA 626 ASP 627 ALA 628 LEU 629 ASP 630 LYS 631 ALA 632 THR 633 GLU 634 LYS 635 LEU 636 LEU 637 ASN 638 GLU 639 GLU 640 LYS 641 SER 642 PRO 643 SER 644 ARG 645 LYS 646 VAL 647 GLY 648 GLU 649 ILE 650 ASP 651 ASN 652 ARG 653 GLY 654 SER 655 HIS 656 PHE 657 TRP 658 LEU 659 THR 660 LYS 661 PHE 662 TRP 663 ALA 664 ASP 665 GLU 666 LEU 667 ALA 668 ALA 669 GLN 670 THR 671 GLU 672 ASP 673 ALA 674 ASP 675 LEU 676 ALA 677 ALA 678 THR 679 PHE 680 ALA 681 PRO 682 VAL 683 ALA 684 GLU 685 ALA 686 LEU 687 ASN 688 THR 689 GLY 690 ALA 691 ALA 692 ASP 693 ILE 694 ASP 695 ALA 696 ALA 697 LEU 698 LEU 699 ALA 700 VAL 701 GLN 702 GLY 703 GLY 704 ALA 705 THR 706 ASP 707 LEU 708 GLY 709 GLY 710 TYR 711 TYR 712 SER 713 PRO 714 ASN 715 GLU 716 GLU 717 LYS 718 LEU 719 THR 720 ASN 721 ILE 722 MET 723 ARG 724 PRO 725 VAL 726 ALA 727 GLN 728 PHE 729 ASN 730 GLU 731 ILE 732 VAL 733 ASP 734 ALA 735 LEU 736

Ligands

Unit 3	MG 739 NAP 740
Unit 4	MG 739