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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN HDAC2 COMPLEXED WITH AN N-(2-AMIN BENZAMIDE
Keywords CLASS 2, HDAC, FOOT POCKET, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3MAX     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HISTONE DEACETYLASE 2  A 367 2958 0
2  Protein   HISTONE DEACETYLASE 2  B 364 2935 0
3  Protein   HISTONE DEACETYLASE 2  C 366 2949 0
4  Ligand   HISTONE DEACETYLASE 2  A 5 0 38
5  Ligand   HISTONE DEACETYLASE 2  B 4 0 25
6  Ligand   HISTONE DEACETYLASE 2  C 4 0 25
7 Water     624 0 624
total       1734 8842 712

Proteins
Unit 1 ALA12 LYS13 LYS14 LYS15 VAL16 CYS17 TYR18 TYR19 TYR20 ASP21 GLY22 ASP23 ILE24 GLY25 ASN26 TYR27 TYR28 TYR29 GLY30 GLN31 GLY32 HIS33 PRO34 MET35 LYS36 PRO37 HIS38 ARG39 ILE40 ARG41 MET42 THR43 HIS44 ASN45 LEU46 LEU47 LEU48 ASN49 TYR50 GLY51 LEU52 TYR53 ARG54 LYS55 MET56 GLU57 ILE58 TYR59 ARG60 PRO61 HIS62 LYS63 ALA64 THR65 ALA66 GLU67 GLU68 MET69 THR70 LYS71 TYR72 HIS73 SER74 ASP75 GLU76 TYR77 ILE78 LYS79 PHE80 LEU81 ARG82 SER83 ILE84 ARG85 PRO86 ASP87 ASN88 MET89 SER90 GLU91 TYR92 SER93 LYS94 GLN95 MET96 GLN97 ARG98 PHE99 ASN100 VAL101 GLY102 GLU103 ASP104 CYS105 PRO106 VAL107 PHE108 ASP109 GLY110 LEU111 PHE112 GLU113 PHE114 CYS115 GLN116 LEU117 SER118 THR119 GLY120 GLY121 SER122 VAL123 ALA124 GLY125 ALA126 VAL127 LYS128 LEU129 ASN130 ARG131 GLN132 GLN133 THR134 ASP135 MET136 ALA137 VAL138 ASN139 TRP140 ALA141 GLY142 GLY143 LEU144 HIS145 HIS146 ALA147 LYS148 LYS149 SER150 GLU151 ALA152 SER153 GLY154 PHE155 CYS156 TYR157 VAL158 ASN159 ASP160 ILE161 VAL162 LEU163 ALA164 ILE165 LEU166 GLU167 LEU168 LEU169 LYS170 TYR171 HIS172 GLN173 ARG174 VAL175 LEU176 TYR177 ILE178 ASP179 ILE180 ASP181 ILE182 HIS183 HIS184 GLY185 ASP186 GLY187 VAL188 GLU189 GLU190 ALA191 PHE192 TYR193 THR194 THR195 ASP196 ARG197 VAL198 MET199 THR200 VAL201 SER202 PHE203 HIS204 LYS205 TYR206 GLY207 GLU208 TYR209 PHE210 PRO211 GLY212 THR213 GLY214 ASP215 LEU216 ARG217 ASP218 ILE219 GLY220 ALA221 GLY222 LYS223 GLY224 LYS225 TYR226 TYR227 ALA228 VAL229 ASN230 PHE231 PRO232 MET233 ARG234 ASP235 GLY236 ILE237 ASP238 ASP239 GLU240 SER241 TYR242 GLY243 GLN244 ILE245 PHE246 LYS247 PRO248 ILE249 ILE250 SER251 LYS252 VAL253 MET254 GLU255 MET256 TYR257 GLN258 PRO259 SER260 ALA261 VAL262 VAL263 LEU264 GLN265 CYS266 GLY267 ALA268 ASP269 SER270 LEU271 SER272 GLY273 ASP274 ARG275 LEU276 GLY277 CYS278 PHE279 ASN280 LEU281 THR282 VAL283 LYS284 GLY285 HIS286 ALA287 LYS288 CYS289 VAL290 GLU291 VAL292 VAL293 LYS294 THR295 PHE296 ASN297 LEU298 PRO299 LEU300 LEU301 MET302 LEU303 GLY304 GLY305 GLY306 GLY307 TYR308 THR309 ILE310 ARG311 ASN312 VAL313 ALA314 ARG315 CYS316 TRP317 THR318 TYR319 GLU320 THR321 ALA322 VAL323 ALA324 LEU325 ASP326 CYS327 GLU328 ILE329 PRO330 ASN331 GLU332 LEU333 PRO334 TYR335 ASN336 ASP337 TYR338 PHE339 GLU340 TYR341 PHE342 GLY343 PRO344 ASP345 PHE346 LYS347 LEU348 HIS349 ILE350 SER351 PRO352 SER353 ASN354 MET355 THR356 ASN357 GLN358 ASN359 THR360 PRO361 GLU362 TYR363 MET364 GLU365 LYS366 ILE367 LYS368 GLN369 ARG370 LEU371 PHE372 GLU373 ASN374 LEU375 ARG376 MET377 LEU378
Unit 2 LYS15 VAL16 CYS17 TYR18 TYR19 TYR20 ASP21 GLY22 ASP23 ILE24 GLY25 ASN26 TYR27 TYR28 TYR29 GLY30 GLN31 GLY32 HIS33 PRO34 MET35 LYS36 PRO37 HIS38 ARG39 ILE40 ARG41 MET42 THR43 HIS44 ASN45 LEU46 LEU47 LEU48 ASN49 TYR50 GLY51 LEU52 TYR53 ARG54 LYS55 MET56 GLU57 ILE58 TYR59 ARG60 PRO61 HIS62 LYS63 ALA64 THR65 ALA66 GLU67 GLU68 MET69 THR70 LYS71 TYR72 HIS73 SER74 ASP75 GLU76 TYR77 ILE78 LYS79 PHE80 LEU81 ARG82 SER83 ILE84 ARG85 PRO86 ASP87 ASN88 MET89 SER90 GLU91 TYR92 SER93 LYS94 GLN95 MET96 GLN97 ARG98 PHE99 ASN100 VAL101 GLY102 GLU103 ASP104 CYS105 PRO106 VAL107 PHE108 ASP109 GLY110 LEU111 PHE112 GLU113 PHE114 CYS115 GLN116 LEU117 SER118 THR119 GLY120 GLY121 SER122 VAL123 ALA124 GLY125 ALA126 VAL127 LYS128 LEU129 ASN130 ARG131 GLN132 GLN133 THR134 ASP135 MET136 ALA137 VAL138 ASN139 TRP140 ALA141 GLY142 GLY143 LEU144 HIS145 HIS146 ALA147 LYS148 LYS149 SER150 GLU151 ALA152 SER153 GLY154 PHE155 CYS156 TYR157 VAL158 ASN159 ASP160 ILE161 VAL162 LEU163 ALA164 ILE165 LEU166 GLU167 LEU168 LEU169 LYS170 TYR171 HIS172 GLN173 ARG174 VAL175 LEU176 TYR177 ILE178 ASP179 ILE180 ASP181 ILE182 HIS183 HIS184 GLY185 ASP186 GLY187 VAL188 GLU189 GLU190 ALA191 PHE192 TYR193 THR194 THR195 ASP196 ARG197 VAL198 MET199 THR200 VAL201 SER202 PHE203 HIS204 LYS205 TYR206 GLY207 GLU208 TYR209 PHE210 PRO211 GLY212 THR213 GLY214 ASP215 LEU216 ARG217 ASP218 ILE219 GLY220 ALA221 GLY222 LYS223 GLY224 LYS225 TYR226 TYR227 ALA228 VAL229 ASN230 PHE231 PRO232 MET233 ARG234 ASP235 GLY236 ILE237 ASP238 ASP239 GLU240 SER241 TYR242 GLY243 GLN244 ILE245 PHE246 LYS247 PRO248 ILE249 ILE250 SER251 LYS252 VAL253 MET254 GLU255 MET256 TYR257 GLN258 PRO259 SER260 ALA261 VAL262 VAL263 LEU264 GLN265 CYS266 GLY267 ALA268 ASP269 SER270 LEU271 SER272 GLY273 ASP274 ARG275 LEU276 GLY277 CYS278 PHE279 ASN280 LEU281 THR282 VAL283 LYS284 GLY285 HIS286 ALA287 LYS288 CYS289 VAL290 GLU291 VAL292 VAL293 LYS294 THR295 PHE296 ASN297 LEU298 PRO299 LEU300 LEU301 MET302 LEU303 GLY304 GLY305 GLY306 GLY307 TYR308 THR309 ILE310 ARG311 ASN312 VAL313 ALA314 ARG315 CYS316 TRP317 THR318 TYR319 GLU320 THR321 ALA322 VAL323 ALA324 LEU325 ASP326 CYS327 GLU328 ILE329 PRO330 ASN331 GLU332 LEU333 PRO334 TYR335 ASN336 ASP337 TYR338 PHE339 GLU340 TYR341 PHE342 GLY343 PRO344 ASP345 PHE346 LYS347 LEU348 HIS349 ILE350 SER351 PRO352 SER353 ASN354 MET355 THR356 ASN357 GLN358 ASN359 THR360 PRO361 GLU362 TYR363 MET364 GLU365 LYS366 ILE367 LYS368 GLN369 ARG370 LEU371 PHE372 GLU373 ASN374 LEU375 ARG376 MET377 LEU378
Unit 3 LYS13 LYS14 LYS15 VAL16 CYS17 TYR18 TYR19 TYR20 ASP21 GLY22 ASP23 ILE24 GLY25 ASN26 TYR27 TYR28 TYR29 GLY30 GLN31 GLY32 HIS33 PRO34 MET35 LYS36 PRO37 HIS38 ARG39 ILE40 ARG41 MET42 THR43 HIS44 ASN45 LEU46 LEU47 LEU48 ASN49 TYR50 GLY51 LEU52 TYR53 ARG54 LYS55 MET56 GLU57 ILE58 TYR59 ARG60 PRO61 HIS62 LYS63 ALA64 THR65 ALA66 GLU67 GLU68 MET69 THR70 LYS71 TYR72 HIS73 SER74 ASP75 GLU76 TYR77 ILE78 LYS79 PHE80 LEU81 ARG82 SER83 ILE84 ARG85 PRO86 ASP87 ASN88 MET89 SER90 GLU91 TYR92 SER93 LYS94 GLN95 MET96 GLN97 ARG98 PHE99 ASN100 VAL101 GLY102 GLU103 ASP104 CYS105 PRO106 VAL107 PHE108 ASP109 GLY110 LEU111 PHE112 GLU113 PHE114 CYS115 GLN116 LEU117 SER118 THR119 GLY120 GLY121 SER122 VAL123 ALA124 GLY125 ALA126 VAL127 LYS128 LEU129 ASN130 ARG131 GLN132 GLN133 THR134 ASP135 MET136 ALA137 VAL138 ASN139 TRP140 ALA141 GLY142 GLY143 LEU144 HIS145 HIS146 ALA147 LYS148 LYS149 SER150 GLU151 ALA152 SER153 GLY154 PHE155 CYS156 TYR157 VAL158 ASN159 ASP160 ILE161 VAL162 LEU163 ALA164 ILE165 LEU166 GLU167 LEU168 LEU169 LYS170 TYR171 HIS172 GLN173 ARG174 VAL175 LEU176 TYR177 ILE178 ASP179 ILE180 ASP181 ILE182 HIS183 HIS184 GLY185 ASP186 GLY187 VAL188 GLU189 GLU190 ALA191 PHE192 TYR193 THR194 THR195 ASP196 ARG197 VAL198 MET199 THR200 VAL201 SER202 PHE203 HIS204 LYS205 TYR206 GLY207 GLU208 TYR209 PHE210 PRO211 GLY212 THR213 GLY214 ASP215 LEU216 ARG217 ASP218 ILE219 GLY220 ALA221 GLY222 LYS223 GLY224 LYS225 TYR226 TYR227 ALA228 VAL229 ASN230 PHE231 PRO232 MET233 ARG234 ASP235 GLY236 ILE237 ASP238 ASP239 GLU240 SER241 TYR242 GLY243 GLN244 ILE245 PHE246 LYS247 PRO248 ILE249 ILE250 SER251 LYS252 VAL253 MET254 GLU255 MET256 TYR257 GLN258 PRO259 SER260 ALA261 VAL262 VAL263 LEU264 GLN265 CYS266 GLY267 ALA268 ASP269 SER270 LEU271 SER272 GLY273 ASP274 ARG275 LEU276 GLY277 CYS278 PHE279 ASN280 LEU281 THR282 VAL283 LYS284 GLY285 HIS286 ALA287 LYS288 CYS289 VAL290 GLU291 VAL292 VAL293 LYS294 THR295 PHE296 ASN297 LEU298 PRO299 LEU300 LEU301 MET302 LEU303 GLY304 GLY305 GLY306 GLY307 TYR308 THR309 ILE310 ARG311 ASN312 VAL313 ALA314 ARG315 CYS316 TRP317 THR318 TYR319 GLU320 THR321 ALA322 VAL323 ALA324 LEU325 ASP326 CYS327 GLU328 ILE329 PRO330 ASN331 GLU332 LEU333 PRO334 TYR335 ASN336 ASP337 TYR338 PHE339 GLU340 TYR341 PHE342 GLY343 PRO344 ASP345 PHE346 LYS347 LEU348 HIS349 ILE350 SER351 PRO352 SER353 ASN354 MET355 THR356 ASN357 GLN358 ASN359 THR360 PRO361 GLU362 TYR363 MET364 GLU365 LYS366 ILE367 LYS368 GLN369 ARG370 LEU371 PHE372 GLU373 ASN374 LEU375 ARG376 MET377 LEU378

Ligands
Unit 4 ZN379 CA380 NA381 NHE383 LLX400
Unit 5 ZN379 CA380 NA381 LLX400
Unit 6 ZN379 CA380 NA381 LLX400

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany