3MAD - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF STSPL (SYMMETRIC FORM)
• Keywords: CARBOXY-LYASE ACTIVITY, PYRIDOXAL PHOSPHATE, LYASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3MAD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SPHINGOSINE-1-PHOSPHATE LYASE	A	451	3410	24
2	Protein	SPHINGOSINE-1-PHOSPHATE LYASE	B	451	3408	24
3	Ligand	SPHINGOSINE-1-PHOSPHATE LYASE	A	1	0	5
4	Ligand	SPHINGOSINE-1-PHOSPHATE LYASE	B	1	0	5
5	Water			350	0	350
total				1254	6818	408

Proteins

Unit 1

LYS 58 PRO 59 TYR 60 ARG 61 ASP 62 ARG 63 PHE 64 PRO 65 SER 66 HIS 67 ALA 68 ARG 69 LEU 70 PRO 71 ARG 72 ALA 73 GLY 74 LEU 75 PRO 76 ARG 77 ALA 78 GLU 79 ILE 80 LEU 81 ALA 82 GLU 83 ILE 84 ALA 85 ALA 86 MET 87 GLY 88 ALA 89 ALA 90 GLU 91 SER 92 PRO 93 ALA 94 TRP 95 ARG 96 ASP 97 GLY 98 TYR 99 ALA 100 SER 101 GLY 102 ALA 103 VAL 104 TYR 105 HIS 106 GLY 107 ASP 108 GLU 109 HIS 110 HIS 111 ILE 112 ALA 113 PHE 114 LEU 115 ASN 116 GLU 117 VAL 118 TYR 119 ALA 120 LEU 121 GLN 122 SER 123 GLN 124 SER 125 ASN 126 PRO 127 LEU 128 HIS 129 PRO 130 ASP 131 LEU 132 TRP 133 PRO 134 SER 135 THR 136 ALA 137 LYS 138 PHE 139 GLU 140 ALA 141 GLU 142 VAL 143 VAL 144 ALA 145 MET 146 THR 147 ALA 148 HIS 149 MET 150 LEU 151 GLY 152 GLY 153 ASP 154 ALA 155 ALA 156 GLY 157 GLY 158 THR 159 VAL 160 CYS 161 GLY 162 THR 163 VAL 164 THR 165 SER 166 GLY 167 GLY 168 THR 169 GLU 170 SER 171 LEU 172 LEU 173 LEU 174 ALA 175 MET 176 LYS 177 THR 178 TYR 179 ARG 180 ASP 181 TRP 182 ALA 183 ARG 184 ALA 185 THR 186 LYS 187 GLY 188 ILE 189 THR 190 ALA 191 PRO 192 GLU 193 ALA 194 VAL 195 VAL 196 PRO 197 VAL 198 SER 199 ALA 200 HIS 201 ALA 202 ALA 203 PHE 204 ASP 205 LYS 206 ALA 207 ALA 208 GLN 209 TYR 210 PHE 211 GLY 212 ILE 213 LYS 214 LEU 215 VAL 216 ARG 217 THR 218 PRO 219 LEU 220 ASP 221 ALA 222 ASP 223 TYR 224 ARG 225 ALA 226 ASP 227 VAL 228 ALA 229 ALA 230 MET 231 ARG 232 GLU 233 ALA 234 ILE 235 THR 236 PRO 237 ASN 238 THR 239 VAL 240 VAL 241 VAL 242 ALA 243 GLY 244 SER 245 ALA 246 PRO 247 GLY 248 TYR 249 PRO 250 HIS 251 GLY 252 VAL 253 VAL 254 ASP 255 PRO 256 ILE 257 PRO 258 GLU 259 ILE 260 ALA 261 ALA 262 LEU 263 ALA 264 ALA 265 GLU 266 HIS 267 GLY 268 ILE 269 GLY 270 CYS 271 HIS 272 VAL 273 ASP 274 ALA 275 CYS 276 LEU 277 GLY 278 GLY 279 PHE 280 ILE 281 LEU 282 PRO 283 TRP 284 ALA 285 GLU 286 ARG 287 LEU 288 GLY 289 TYR 290 PRO 291 VAL 292 PRO 293 PRO 294 PHE 295 ASP 296 PHE 297 ARG 298 LEU 299 GLU 300 GLY 301 VAL 302 THR 303 SER 304 VAL 305 SER 306 ALA 307 ASP 308 THR 309 HIS 310 LLP 311 TYR 312 GLY 313 TYR 314 GLY 315 ALA 316 LYS 317 GLY 318 THR 319 SER 320 VAL 321 ILE 322 LEU 323 TYR 324 ARG 325 ARG 326 PRO 327 ASP 328 LEU 329 LEU 330 HIS 331 TYR 332 GLN 333 TYR 334 PHE 335 ILE 336 ALA 337 ALA 338 ASP 339 TRP 340 PRO 341 GLY 342 GLY 343 LEU 344 TYR 345 PHE 346 SER 347 PRO 348 THR 349 PHE 350 ALA 351 GLY 352 SER 353 ARG 354 PRO 355 GLY 356 ALA 357 LEU 358 SER 359 ALA 360 THR 361 ALA 362 TRP 363 ALA 364 ALA 365 MET 366 LEU 367 SER 368 LEU 369 GLY 370 GLU 371 GLU 372 GLY 373 TYR 374 LEU 375 ASP 376 ALA 377 THR 378 ARG 379 ARG 380 ILE 381 LEU 382 GLN 383 ALA 384 ALA 385 ASP 386 ARG 387 LEU 388 LYS 389 ALA 390 GLY 391 VAL 392 ARG 393 ALA 394 ILE 395 PRO 396 SER 397 LEU 398 LYS 399 ILE 400 LEU 401 GLY 402 ASP 403 PRO 404 LEU 405 TRP 406 VAL 407 ILE 408 ALA 409 VAL 410 ALA 411 SER 412 ASP 413 GLU 414 LEU 415 ASN 416 ILE 417 TYR 418 GLN 419 VAL 420 MET 421 GLU 422 GLU 423 MET 424 ALA 425 GLY 426 ARG 427 GLY 428 TRP 429 ARG 430 LEU 431 ASN 432 GLY 433 LEU 434 HIS 435 ARG 436 PRO 437 PRO 438 ALA 439 PHE 440 HIS 441 VAL 442 ALA 443 LEU 444 THR 445 LEU 446 ARG 447 HIS 448 THR 449 GLU 450 PRO 451 GLY 452 VAL 453 VAL 454 ASP 455 ARG 456 PHE 457 LEU 458 ALA 459 ASP 460 LEU 461 GLN 462 ASP 463 ALA 464 VAL 465 ALA 466 GLN 467 VAL 468 ARG 469 ALA 470 HIS 471 PRO 472 GLU 473 LYS 474 ALA 475 THR 476 GLY 477 MET 478 ALA 479 PRO 480 VAL 481 TYR 482 GLY 483 MET 484 ALA 485 ALA 486 ALA 487 ALA 488 PRO 489 PRO 490 GLU 491 LEU 492 VAL 493 ARG 494 GLN 495 VAL 496 LEU 497 THR 498 GLY 499 PHE 500 ILE 501 ASP 502 LEU 503 LEU 504 TYR 505 GLU 506 VAL 507 HIS 508

Unit 2

ILE 57 LYS 58 PRO 59 TYR 60 ARG 61 ASP 62 ARG 63 PHE 64 PRO 65 SER 66 HIS 67 ALA 68 ARG 69 LEU 70 PRO 71 ARG 72 ALA 73 GLY 74 LEU 75 PRO 76 ARG 77 ALA 78 GLU 79 ILE 80 LEU 81 ALA 82 GLU 83 ILE 84 ALA 85 ALA 86 MET 87 GLY 88 ALA 89 ALA 90 GLU 91 SER 92 PRO 93 ALA 94 TRP 95 ARG 96 ASP 97 GLY 98 TYR 99 ALA 100 SER 101 GLY 102 ALA 103 VAL 104 TYR 105 HIS 106 GLY 107 ASP 108 GLU 109 HIS 110 HIS 111 ILE 112 ALA 113 PHE 114 LEU 115 ASN 116 GLU 117 VAL 118 TYR 119 ALA 120 LEU 121 GLN 122 SER 123 GLN 124 SER 125 ASN 126 PRO 127 LEU 128 HIS 129 PRO 130 ASP 131 LEU 132 TRP 133 PRO 134 SER 135 THR 136 ALA 137 LYS 138 PHE 139 GLU 140 ALA 141 GLU 142 VAL 143 VAL 144 ALA 145 MET 146 THR 147 ALA 148 HIS 149 MET 150 LEU 151 GLY 152 GLY 153 ASP 154 ALA 155 ALA 156 GLY 157 GLY 158 THR 159 VAL 160 CYS 161 GLY 162 THR 163 VAL 164 THR 165 SER 166 GLY 167 GLY 168 THR 169 GLU 170 SER 171 LEU 172 LEU 173 LEU 174 ALA 175 MET 176 LYS 177 THR 178 TYR 179 ARG 180 ASP 181 TRP 182 ALA 183 ARG 184 ALA 185 THR 186 LYS 187 GLY 188 ILE 189 THR 190 ALA 191 PRO 192 GLU 193 ALA 194 VAL 195 VAL 196 PRO 197 VAL 198 SER 199 ALA 200 HIS 201 ALA 202 ALA 203 PHE 204 ASP 205 LYS 206 ALA 207 ALA 208 GLN 209 TYR 210 PHE 211 GLY 212 ILE 213 LYS 214 LEU 215 VAL 216 ARG 217 THR 218 PRO 219 LEU 220 ASP 221 ALA 222 ASP 223 TYR 224 ARG 225 ALA 226 ASP 227 VAL 228 ALA 229 ALA 230 MET 231 ARG 232 GLU 233 ALA 234 ILE 235 THR 236 PRO 237 ASN 238 THR 239 VAL 240 VAL 241 VAL 242 ALA 243 GLY 244 SER 245 ALA 246 PRO 247 GLY 248 TYR 249 PRO 250 HIS 251 GLY 252 VAL 253 VAL 254 ASP 255 PRO 256 ILE 257 PRO 258 GLU 259 ILE 260 ALA 261 ALA 262 LEU 263 ALA 264 ALA 265 GLU 266 HIS 267 GLY 268 ILE 269 GLY 270 CYS 271 HIS 272 VAL 273 ASP 274 ALA 275 CYS 276 LEU 277 GLY 278 GLY 279 PHE 280 ILE 281 LEU 282 PRO 283 TRP 284 ALA 285 GLU 286 ARG 287 LEU 288 GLY 289 TYR 290 PRO 291 VAL 292 PRO 293 PRO 294 PHE 295 ASP 296 PHE 297 ARG 298 LEU 299 GLU 300 GLY 301 VAL 302 THR 303 SER 304 VAL 305 SER 306 ALA 307 ASP 308 THR 309 HIS 310 LLP 311 TYR 312 GLY 313 TYR 314 GLY 315 ALA 316 LYS 317 GLY 318 THR 319 SER 320 VAL 321 ILE 322 LEU 323 TYR 324 ARG 325 ARG 326 PRO 327 ASP 328 LEU 329 LEU 330 HIS 331 TYR 332 GLN 333 TYR 334 PHE 335 ILE 336 ALA 337 ALA 338 ASP 339 TRP 340 PRO 341 GLY 342 GLY 343 LEU 344 TYR 345 PHE 346 SER 347 PRO 348 THR 349 PHE 350 ALA 351 GLY 352 SER 353 ARG 354 PRO 355 GLY 356 ALA 357 LEU 358 SER 359 ALA 360 THR 361 ALA 362 TRP 363 ALA 364 ALA 365 MET 366 LEU 367 SER 368 LEU 369 GLY 370 GLU 371 GLU 372 GLY 373 TYR 374 LEU 375 ASP 376 ALA 377 THR 378 ARG 379 ARG 380 ILE 381 LEU 382 GLN 383 ALA 384 ALA 385 ASP 386 ARG 387 LEU 388 LYS 389 ALA 390 GLY 391 VAL 392 ARG 393 ALA 394 ILE 395 PRO 396 SER 397 LEU 398 LYS 399 ILE 400 LEU 401 GLY 402 ASP 403 PRO 404 LEU 405 TRP 406 VAL 407 ILE 408 ALA 409 VAL 410 ALA 411 SER 412 ASP 413 GLU 414 LEU 415 ASN 416 ILE 417 TYR 418 GLN 419 VAL 420 MET 421 GLU 422 GLU 423 MET 424 ALA 425 GLY 426 ARG 427 GLY 428 TRP 429 ARG 430 LEU 431 ASN 432 GLY 433 LEU 434 HIS 435 ARG 436 PRO 437 PRO 438 ALA 439 PHE 440 HIS 441 VAL 442 ALA 443 LEU 444 THR 445 LEU 446 ARG 447 HIS 448 THR 449 GLU 450 PRO 451 GLY 452 VAL 453 VAL 454 ASP 455 ARG 456 PHE 457 LEU 458 ALA 459 ASP 460 LEU 461 GLN 462 ASP 463 ALA 464 VAL 465 ALA 466 GLN 467 VAL 468 ARG 469 ALA 470 HIS 471 PRO 472 GLU 473 LYS 474 ALA 475 THR 476 GLY 477 MET 478 ALA 479 PRO 480 VAL 481 TYR 482 GLY 483 MET 484 ALA 485 ALA 486 ALA 487 ALA 488 PRO 489 PRO 490 GLU 491 LEU 492 VAL 493 ARG 494 GLN 495 VAL 496 LEU 497 THR 498 GLY 499 PHE 500 ILE 501 ASP 502 LEU 503 LEU 504 TYR 505 GLU 506 VAL 507

Ligands

Unit 3	PO4 514
Unit 4	PO4 514