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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MOUSE MD-1 IN COMPLEX WITH PHOSPHATIDYL
Keywords BETA SHEET, GLYCOPROTEIN, IMMUNITY, INFLAMMATORY RESPONSE, I IMMUNITY, SECRETED, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3M7O     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LYMPHOCYTE ANTIGEN 86  A 137 1072 0
2  Protein   LYMPHOCYTE ANTIGEN 86  B 131 1021 0
3  Protein   LYMPHOCYTE ANTIGEN 86  C 131 1021 0
4  Protein   LYMPHOCYTE ANTIGEN 86  D 131 1021 0
5  Ligand   LYMPHOCYTE ANTIGEN 86  A 8 0 127
6  Ligand   LYMPHOCYTE ANTIGEN 86  B 5 0 55
7  Ligand   LYMPHOCYTE ANTIGEN 86  C 5 0 55
8  Ligand   LYMPHOCYTE ANTIGEN 86  D 8 0 127
9 Water     444 0 444
total       1000 4135 808

Proteins
Unit 1 GLY26 TRP27 PRO28 LYS29 HIS30 THR31 ALA32 CYS33 ASN34 SER35 GLY36 GLY37 LEU38 GLU39 VAL40 VAL41 TYR42 GLN43 SER44 CYS45 ASP46 PRO47 LEU48 GLN49 ASP50 PHE51 GLY52 LEU53 SER54 ILE55 ASP56 GLN57 CYS58 SER59 LYS60 GLN61 ILE62 GLN63 SER64 ASN65 LEU66 ASN67 ILE68 ARG69 PHE70 GLY71 ILE72 ILE73 LEU74 ARG75 GLN76 ASP77 ILE78 ARG79 LYS80 LEU81 PHE82 LEU83 ASP84 ILE85 THR86 LEU87 MET88 ALA89 LYS90 GLY91 SER92 SER93 ILE94 LEU95 ASN96 TYR97 SER98 TYR99 PRO100 LEU101 CYS102 GLU103 GLU104 ASP105 GLN106 PRO107 LYS108 PHE109 SER110 PHE111 CYS112 GLY113 ARG114 ARG115 LYS116 GLY117 GLU118 GLN119 ILE120 TYR121 TYR122 ALA123 GLY124 PRO125 VAL126 ASN127 ASN128 PRO129 GLY130 LEU131 ASP132 VAL133 PRO134 GLN135 GLY136 GLU137 TYR138 GLN139 LEU140 LEU141 LEU142 GLU143 LEU144 TYR145 ASN146 GLU147 ASN148 ARG149 ALA150 THR151 VAL152 ALA153 CYS154 ALA155 ASN156 ALA157 THR158 VAL159 THR160 SER161 SER162
Unit 2 GLY26 TRP27 PRO28 LYS29 HIS30 THR31 ALA32 CYS33 ASN34 SER35 GLY36 GLY37 LEU38 GLU39 VAL40 VAL41 TYR42 GLN43 SER44 CYS45 ASP46 PRO47 LEU48 GLN49 ASP50 PHE51 GLY52 LEU53 SER54 ILE55 ASP56 GLN57 CYS58 SER59 LYS60 GLN61 ILE62 GLN63 SER64 ASN65 LEU66 ASN67 ILE68 ARG69 PHE70 GLY71 ILE72 ILE73 LEU74 ARG75 GLN76 ASP77 ILE78 ARG79 LYS80 LEU81 PHE82 LEU83 ASP84 ILE85 THR86 LEU87 MET88 ALA89 LYS90 GLY91 SER92 SER93 ILE94 LEU95 ASN96 TYR97 SER98 TYR99 PRO100 LEU101 CYS102 PHE109 SER110 PHE111 CYS112 GLY113 ARG114 ARG115 LYS116 GLY117 GLU118 GLN119 ILE120 TYR121 TYR122 ALA123 GLY124 PRO125 VAL126 ASN127 ASN128 PRO129 GLY130 LEU131 ASP132 VAL133 PRO134 GLN135 GLY136 GLU137 TYR138 GLN139 LEU140 LEU141 LEU142 GLU143 LEU144 TYR145 ASN146 GLU147 ASN148 ARG149 ALA150 THR151 VAL152 ALA153 CYS154 ALA155 ASN156 ALA157 THR158 VAL159 THR160 SER161 SER162
Unit 3 GLY26 TRP27 PRO28 LYS29 HIS30 THR31 ALA32 CYS33 ASN34 SER35 GLY36 GLY37 LEU38 GLU39 VAL40 VAL41 TYR42 GLN43 SER44 CYS45 ASP46 PRO47 LEU48 GLN49 ASP50 PHE51 GLY52 LEU53 SER54 ILE55 ASP56 GLN57 CYS58 SER59 LYS60 GLN61 ILE62 GLN63 SER64 ASN65 LEU66 ASN67 ILE68 ARG69 PHE70 GLY71 ILE72 ILE73 LEU74 ARG75 GLN76 ASP77 ILE78 ARG79 LYS80 LEU81 PHE82 LEU83 ASP84 ILE85 THR86 LEU87 MET88 ALA89 LYS90 GLY91 SER92 SER93 ILE94 LEU95 ASN96 TYR97 SER98 TYR99 PRO100 LEU101 CYS102 PHE109 SER110 PHE111 CYS112 GLY113 ARG114 ARG115 LYS116 GLY117 GLU118 GLN119 ILE120 TYR121 TYR122 ALA123 GLY124 PRO125 VAL126 ASN127 ASN128 PRO129 GLY130 LEU131 ASP132 VAL133 PRO134 GLN135 GLY136 GLU137 TYR138 GLN139 LEU140 LEU141 LEU142 GLU143 LEU144 TYR145 ASN146 GLU147 ASN148 ARG149 ALA150 THR151 VAL152 ALA153 CYS154 ALA155 ASN156 ALA157 THR158 VAL159 THR160 SER161 SER162
Unit 4 GLY26 TRP27 PRO28 LYS29 HIS30 THR31 ALA32 CYS33 ASN34 SER35 GLY36 GLY37 LEU38 GLU39 VAL40 VAL41 TYR42 GLN43 SER44 CYS45 ASP46 PRO47 LEU48 GLN49 ASP50 PHE51 GLY52 LEU53 SER54 ILE55 ASP56 GLN57 CYS58 SER59 LYS60 GLN61 ILE62 GLN63 SER64 ASN65 LEU66 ASN67 ILE68 ARG69 PHE70 GLY71 ILE72 ILE73 LEU74 ARG75 GLN76 ASP77 ILE78 ARG79 LYS80 LEU81 PHE82 LEU83 ASP84 ILE85 THR86 LEU87 MET88 ALA89 LYS90 GLY91 SER92 SER93 ILE94 LEU95 ASN96 TYR97 SER98 TYR99 PRO100 LEU101 CYS102 PHE109 SER110 PHE111 CYS112 GLY113 ARG114 ARG115 LYS116 GLY117 GLU118 GLN119 ILE120 TYR121 TYR122 ALA123 GLY124 PRO125 VAL126 ASN127 ASN128 PRO129 GLY130 LEU131 ASP132 VAL133 PRO134 GLN135 GLY136 GLU137 TYR138 GLN139 LEU140 LEU141 LEU142 GLU143 LEU144 TYR145 ASN146 GLU147 ASN148 ARG149 ALA150 THR151 VAL152 ALA153 CYS154 ALA155 ASN156 ALA157 THR158 VAL159 THR160 SER161 SER162

Ligands
Unit 5 BEN163 BEN164 BEN165 BEN166 BEN167 NAG201 NAG202 L9R301
Unit 6 BEN163 BEN164 BEN165 NAG201 NAG202
Unit 7 BEN163 BEN164 BEN165 NAG201 NAG202
Unit 8 BEN163 BEN164 BEN165 BEN166 BEN167 NAG201 NAG202 L9R301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany