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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL BASIS FOR THE NEGATIVE REGULATION OF BACTERIAL ST RESPONSE BY RSEB
Keywords RSEA, RSEB, RSEP, STRESS RESPONSE, SIGMA FACTOR, PERIPLASM, MEMBRANE, TRANSMEMBRANE, SIGNALING PROTEIN-SIGNALING PROTEI
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3M4W     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SIGMA-E FACTOR REGULATORY PROTEIN RSEB  A 284 2263 0
2  Protein   SIGMA-E FACTOR REGULATORY PROTEIN RSEB  B 284 2263 0
3  Protein   SIGMA-E FACTOR REGULATORY PROTEIN RSEB  C 276 2206 0
4  Protein   SIGMA-E FACTOR REGULATORY PROTEIN RSEB  D 269 2147 0
5  Protein   SIGMA-E FACTOR NEGATIVE REGULATORY PROTEIN  E 42 341 0
6  Protein   SIGMA-E FACTOR NEGATIVE REGULATORY PROTEIN  F 42 341 0
7  Protein   SIGMA-E FACTOR NEGATIVE REGULATORY PROTEIN  G 36 300 0
8  Protein   SIGMA-E FACTOR NEGATIVE REGULATORY PROTEIN  H 31 247 0
9  Ligand   SIGMA-E FACTOR REGULATORY PROTEIN RSEB  A 2 0 2
10  Ligand   SIGMA-E FACTOR REGULATORY PROTEIN RSEB  B 2 0 2
11  Ligand   SIGMA-E FACTOR NEGATIVE REGULATORY PROTEIN  E 1 0 1
12  Ligand   SIGMA-E FACTOR NEGATIVE REGULATORY PROTEIN  F 1 0 1
13 Water     421 0 421
total       1691 10108 427
Proteins
Unit 1 PRO25 ALA26 SER27 GLY28 ALA29 LEU30 LEU31 GLN32 GLN33 MET34 ASN35 LEU36 ALA37 SER38 GLN39 SER40 LEU41 ASN42 TYR43 GLU44 LEU45 SER46 PHE47 ILE48 SER49 ILE50 ASN51 LYS52 GLN53 GLY54 VAL55 GLU56 SER57 LEU58 ARG59 TYR60 ARG61 HIS62 ALA63 ARG64 LEU65 ASP66 ASN67 ARG68 PRO69 LEU70 ALA71 GLN72 LEU73 LEU74 GLN75 MET76 ASP77 GLY78 PRO79 ARG80 ARG81 GLU82 VAL83 VAL84 GLN85 ARG86 GLY87 ASN88 GLU89 ILE90 SER91 TYR92 PHE93 GLU94 PRO95 GLY96 LEU97 GLU98 PRO99 PHE100 THR101 LEU102 ASN103 GLY104 ASP105 TYR106 ILE107 VAL108 ASP109 SER110 LEU111 PRO112 SER113 LEU114 ILE115 TYR116 THR117 ASP118 PHE119 LYS120 ARG121 LEU122 SER123 PRO124 TYR125 TYR126 ASP127 PHE128 ILE129 SER130 VAL131 GLY132 ARG133 THR134 ARG135 ILE136 ALA137 ASP138 ARG139 LEU140 CYS141 GLU142 VAL143 ILE144 ARG145 VAL146 VAL147 ALA148 ARG149 ASP150 GLY151 THR152 ARG153 TYR154 SER155 TYR156 ILE157 VAL158 TRP159 MET160 ASP161 THR162 GLU163 SER164 LYS165 LEU166 PRO167 MET168 ARG169 VAL170 ASP171 LEU172 LEU173 ASP174 ARG175 ASP176 GLY177 GLU178 THR179 LEU180 GLU181 GLN182 PHE183 ARG184 VAL185 ILE186 ALA187 PHE188 ASN189 VAL190 ASN191 GLN192 ASP193 ILE194 SER195 SER196 SER197 MET198 GLN199 THR200 LEU201 ALA202 LYS203 ALA204 ASN205 LEU206 PRO207 PRO208 LEU209 LEU210 SER211 VAL212 PRO213 VAL214 GLY215 GLU216 LYS217 ALA218 LYS219 PHE220 SER221 TRP222 THR223 PRO224 THR225 TRP226 LEU227 PRO228 GLN229 GLY230 PHE231 SER232 GLU233 VAL234 SER235 SER236 SER237 ARG238 ARG239 MET247 PRO248 ILE249 GLU250 SER251 ARG252 LEU253 TYR254 SER255 ASP256 GLY257 LEU258 PHE259 SER260 PHE261 SER262 VAL263 ASN264 VAL265 ASN266 ARG267 ALA268 THR269 PRO270 SER271 SER272 THR273 ASP274 GLN275 MET276 LEU277 ARG278 THR279 GLY280 ARG281 ARG282 THR283 VAL284 SER285 THR286 SER287 VAL288 ARG289 ASP290 ASN291 ALA292 GLU293 ILE294 THR295 ILE296 VAL297 GLY298 GLU299 LEU300 PRO301 PRO302 GLN303 THR304 ALA305 LYS306 ARG307 ILE308 ALA309 GLU310 ASN311 ILE312 LYS313 PHE314 GLY315
Unit 2 PRO25 ALA26 SER27 GLY28 ALA29 LEU30 LEU31 GLN32 GLN33 MET34 ASN35 LEU36 ALA37 SER38 GLN39 SER40 LEU41 ASN42 TYR43 GLU44 LEU45 SER46 PHE47 ILE48 SER49 ILE50 ASN51 LYS52 GLN53 GLY54 VAL55 GLU56 SER57 LEU58 ARG59 TYR60 ARG61 HIS62 ALA63 ARG64 LEU65 ASP66 ASN67 ARG68 PRO69 LEU70 ALA71 GLN72 LEU73 LEU74 GLN75 MET76 ASP77 GLY78 PRO79 ARG80 ARG81 GLU82 VAL83 VAL84 GLN85 ARG86 GLY87 ASN88 GLU89 ILE90 SER91 TYR92 PHE93 GLU94 PRO95 GLY96 LEU97 GLU98 PRO99 PHE100 THR101 LEU102 ASN103 GLY104 ASP105 TYR106 ILE107 VAL108 ASP109 SER110 LEU111 PRO112 SER113 LEU114 ILE115 TYR116 THR117 ASP118 PHE119 LYS120 ARG121 LEU122 SER123 PRO124 TYR125 TYR126 ASP127 PHE128 ILE129 SER130 VAL131 GLY132 ARG133 THR134 ARG135 ILE136 ALA137 ASP138 ARG139 LEU140 CYS141 GLU142 VAL143 ILE144 ARG145 VAL146 VAL147 ALA148 ARG149 ASP150 GLY151 THR152 ARG153 TYR154 SER155 TYR156 ILE157 VAL158 TRP159 MET160 ASP161 THR162 GLU163 SER164 LYS165 LEU166 PRO167 MET168 ARG169 VAL170 ASP171 LEU172 LEU173 ASP174 ARG175 ASP176 GLY177 GLU178 THR179 LEU180 GLU181 GLN182 PHE183 ARG184 VAL185 ILE186 ALA187 PHE188 ASN189 VAL190 ASN191 GLN192 ASP193 ILE194 SER195 SER196 SER197 MET198 GLN199 THR200 LEU201 ALA202 LYS203 ALA204 ASN205 LEU206 PRO207 PRO208 LEU209 LEU210 SER211 VAL212 PRO213 VAL214 GLY215 GLU216 LYS217 ALA218 LYS219 PHE220 SER221 TRP222 THR223 PRO224 THR225 TRP226 LEU227 PRO228 GLN229 GLY230 PHE231 SER232 GLU233 VAL234 SER235 SER236 SER237 ARG238 ARG239 MET247 PRO248 ILE249 GLU250 SER251 ARG252 LEU253 TYR254 SER255 ASP256 GLY257 LEU258 PHE259 SER260 PHE261 SER262 VAL263 ASN264 VAL265 ASN266 ARG267 ALA268 THR269 PRO270 SER271 SER272 THR273 ASP274 GLN275 MET276 LEU277 ARG278 THR279 GLY280 ARG281 ARG282 THR283 VAL284 SER285 THR286 SER287 VAL288 ARG289 ASP290 ASN291 ALA292 GLU293 ILE294 THR295 ILE296 VAL297 GLY298 GLU299 LEU300 PRO301 PRO302 GLN303 THR304 ALA305 LYS306 ARG307 ILE308 ALA309 GLU310 ASN311 ILE312 LYS313 PHE314 GLY315
Unit 3 THR24 PRO25 ALA26 SER27 GLY28 ALA29 LEU30 LEU31 GLN32 GLN33 MET34 ASN35 LEU36 ALA37 SER38 GLN39 SER40 LEU41 ASN42 TYR43 GLU44 LEU45 SER46 PHE47 ILE48 SER49 ILE50 ASN51 LYS52 GLN53 GLY54 VAL55 GLU56 SER57 LEU58 ARG59 TYR60 ARG61 HIS62 ALA63 ARG64 LEU65 ASP66 ASN67 ARG68 PRO69 LEU70 ALA71 GLN72 LEU73 LEU74 GLN75 MET76 ASP77 GLY78 PRO79 ARG80 ARG81 GLU82 VAL83 VAL84 GLN85 ARG86 GLY87 ASN88 GLU89 ILE90 SER91 TYR92 PHE93 GLU94 PRO95 GLY96 LEU97 GLU98 PRO99 PHE100 THR101 LEU102 ASN103 GLY104 ASP105 TYR106 ILE107 VAL108 ASP109 SER110 LEU111 PRO112 SER113 LEU114 ILE115 TYR116 THR117 ASP118 PHE119 LYS120 ARG121 LEU122 SER123 PRO124 TYR125 TYR126 ASP127 PHE128 ILE129 SER130 VAL131 GLY132 ARG133 THR134 ARG135 ILE136 ALA137 ASP138 ARG139 LEU140 CYS141 GLU142 VAL143 ILE144 ARG145 VAL146 VAL147 ALA148 ARG149 ASP150 GLY151 THR152 ARG153 TYR154 SER155 TYR156 ILE157 VAL158 TRP159 MET160 ASP161 THR162 GLU163 SER164 LYS165 LEU166 PRO167 MET168 ARG169 VAL170 ASP171 LEU172 LEU173 ASP174 ARG175 ASP176 GLY177 GLU178 THR179 LEU180 GLU181 GLN182 PHE183 ARG184 VAL185 ILE186 ALA187 PHE188 ASN189 VAL190 ASN191 GLN192 ASP193 ILE194 SER195 SER196 SER197 MET198 GLN199 THR200 LEU201 ALA202 LYS203 ALA204 ASN205 LEU206 PRO207 PRO208 LEU209 LEU210 ALA218 LYS219 PHE220 SER221 TRP222 THR223 PRO224 THR225 TRP226 LEU227 PRO228 GLN229 GLY230 PHE231 SER232 GLU233 VAL234 SER235 SER236 SER237 ARG238 ARG239 ILE249 GLU250 SER251 ARG252 LEU253 TYR254 SER255 ASP256 GLY257 LEU258 PHE259 SER260 PHE261 SER262 VAL263 ASN264 VAL265 ASN266 ARG267 ALA268 THR269 PRO270 SER271 SER272 THR273 ASP274 GLN275 MET276 LEU277 ARG278 THR279 GLY280 ARG281 ARG282 THR283 VAL284 SER285 THR286 SER287 VAL288 ARG289 ASP290 ASN291 ALA292 GLU293 ILE294 THR295 ILE296 VAL297 GLY298 GLU299 LEU300 PRO301 PRO302 GLN303 THR304 ALA305 LYS306 ARG307 ILE308 ALA309 GLU310 ASN311 ILE312 LYS313 PHE314 GLY315
Unit 4 THR24 PRO25 ALA26 SER27 GLY28 ALA29 LEU30 LEU31 GLN32 GLN33 MET34 ASN35 LEU36 ALA37 SER38 GLN39 SER40 LEU41 ASN42 TYR43 GLU44 LEU45 SER46 PHE47 ILE48 SER49 ILE50 ASN51 LYS52 GLN53 GLY54 VAL55 GLU56 SER57 LEU58 ARG59 TYR60 ARG61 HIS62 ALA63 ARG64 LEU65 ASP66 ASN67 ARG68 PRO69 LEU70 ALA71 GLN72 LEU73 LEU74 GLN75 MET76 ASP77 GLY78 PRO79 ARG80 ARG81 GLU82 VAL83 VAL84 GLN85 ARG86 GLY87 ASN88 GLU89 ILE90 SER91 TYR92 PHE93 GLU94 PRO95 GLY96 LEU97 GLU98 PRO99 PHE100 THR101 LEU102 ASN103 GLY104 ASP105 TYR106 ILE107 VAL108 ASP109 SER110 LEU111 PRO112 SER113 LEU114 ILE115 TYR116 THR117 ASP118 PHE119 LYS120 ARG121 LEU122 SER123 PRO124 TYR125 TYR126 ASP127 PHE128 ILE129 SER130 VAL131 GLY132 ARG133 THR134 ARG135 ILE136 ALA137 ASP138 ARG139 LEU140 CYS141 GLU142 VAL143 ILE144 ARG145 VAL146 VAL147 ALA148 ARG149 ASP150 GLY151 THR152 ARG153 TYR154 SER155 TYR156 ILE157 VAL158 TRP159 MET160 ASP161 THR162 GLU163 SER164 LYS165 LEU166 PRO167 MET168 ARG169 VAL170 ASP171 LEU172 LEU173 ASP174 ARG175 ASP176 GLY177 GLU178 THR179 LEU180 GLU181 GLN182 PHE183 ARG184 VAL185 ILE186 ALA187 PHE188 ASN189 VAL190 ASN191 GLN192 ASP193 ILE194 SER195 SER196 SER197 MET198 GLN199 THR200 LEU201 ALA202 LYS203 ALA204 ASN205 LEU206 PRO207 PRO208 LEU209 LEU210 SER221 TRP222 THR223 PRO224 THR225 TRP226 LEU227 PRO228 GLN229 GLY230 PHE231 SER232 GLU233 VAL234 SER235 SER236 SER237 GLU250 SER251 ARG252 LEU253 TYR254 SER255 ASP256 GLY257 LEU258 PHE259 SER260 PHE261 SER262 VAL263 ASN264 VAL265 ASN266 ARG267 ALA268 THR269 PRO270 SER271 SER272 THR273 ASP274 GLN275 MET276 LEU277 ARG278 THR279 GLY280 ARG281 ARG282 THR283 VAL284 SER285 THR286 SER287 VAL288 ARG289 ASP290 ASN291 ALA292 GLU293 ILE294 THR295 ILE296 VAL297 GLY298 GLU299 LEU300 PRO301 PRO302 GLN303 THR304 ALA305 LYS306 ARG307 ILE308 ALA309 GLU310 ASN311 ILE312 LYS313 PHE314
Unit 5 GLU132 THR133 PRO134 VAL135 PHE136 ASN137 THR138 LEU139 PRO140 MET141 MET142 GLY143 LYS144 ALA145 SER146 PRO147 VAL148 SER149 LEU150 GLY151 GLN169 ARG170 ARG171 ARG172 ILE173 ASN174 ALA175 MET176 LEU177 GLN178 ASP179 TYR180 GLU181 LEU182 GLN183 ARG184 ARG185 LEU186 HIS187 SER188 GLU189 GLN190
Unit 6 GLU132 THR133 PRO134 VAL135 PHE136 ASN137 THR138 LEU139 PRO140 MET141 MET142 GLY143 LYS144 ALA145 SER146 PRO147 VAL148 SER149 LEU150 GLY151 GLN169 ARG170 ARG171 ARG172 ILE173 ASN174 ALA175 MET176 LEU177 GLN178 ASP179 TYR180 GLU181 LEU182 GLN183 ARG184 ARG185 LEU186 HIS187 SER188 GLU189 GLN190
Unit 7 VAL135 PHE136 ASN137 THR138 LEU139 PRO140 MET141 MET142 GLY143 LYS144 ALA145 SER146 PRO147 VAL148 GLN169 ARG170 ARG171 ARG172 ILE173 ASN174 ALA175 MET176 LEU177 GLN178 ASP179 TYR180 GLU181 LEU182 GLN183 ARG184 ARG185 LEU186 HIS187 SER188 GLU189 GLN190
Unit 8 PRO134 VAL135 PHE136 ASN137 THR138 LEU139 PRO140 MET141 MET142 GLY143 LYS144 ALA145 SER146 PRO147 VAL148 ILE173 ASN174 ALA175 MET176 LEU177 GLN178 ASP179 TYR180 GLU181 LEU182 GLN183 ARG184 ARG185 LEU186 HIS187 SER188
Ligands
Unit 9 ZN1 ZN5
Unit 10 ZN2 ZN6
Unit 11 ZN4
Unit 12 ZN3
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany