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Sequence, Chains, Asymmetric and Biological Units

Title INTERCONVERSION OF HUMAN LYSOSOMAL ENZYME SPECIFICITIES
Keywords GLYCOPROTEIN, CARBOHYDRATE-BINDING PROTEIN, GLYCOSIDASE, LYS ENZYME, (BETA/ALPHA)8 BARREL, ENZYME INTERCONVERSION, DISEA MUTATION, DISULFIDE BOND, HYDROLASE, LYSOSOME
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3LXB     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALPHA-GALACTOSIDASE A  A 395 3156 0
2  Protein   ALPHA-GALACTOSIDASE A  B 396 3164 0
3  Ligand    C 4 0 50
4  Ligand    D 2 0 28
5  Ligand    E 4 0 50
6  Ligand   ALPHA-GALACTOSIDASE A  A 3 0 26
7  Ligand   ALPHA-GALACTOSIDASE A  B 6 0 52
8 Water     131 0 131
total       941 6320 337

Proteins
Unit 1 LEU32 ASP33 ASN34 GLY35 LEU36 ALA37 ARG38 THR39 PRO40 THR41 MET42 GLY43 TRP44 LEU45 HIS46 TRP47 GLU48 ARG49 PHE50 MET51 CYS52 ASN53 LEU54 ASP55 CYS56 GLN57 GLU58 GLU59 PRO60 ASP61 SER62 CYS63 ILE64 SER65 GLU66 LYS67 LEU68 PHE69 MET70 GLU71 MET72 ALA73 GLU74 LEU75 MET76 VAL77 SER78 GLU79 GLY80 TRP81 LYS82 ASP83 ALA84 GLY85 TYR86 GLU87 TYR88 LEU89 CYS90 ILE91 ASP92 ASP93 CYS94 TRP95 MET96 ALA97 PRO98 GLN99 ARG100 ASP101 SER102 GLU103 GLY104 ARG105 LEU106 GLN107 ALA108 ASP109 PRO110 GLN111 ARG112 PHE113 PRO114 HIS115 GLY116 ILE117 ARG118 GLN119 LEU120 ALA121 ASN122 TYR123 VAL124 HIS125 SER126 LYS127 GLY128 LEU129 LYS130 LEU131 GLY132 ILE133 TYR134 ALA135 ASP136 VAL137 GLY138 ASN139 LYS140 THR141 CYS142 ALA143 GLY144 PHE145 PRO146 GLY147 SER148 PHE149 GLY150 TYR151 TYR152 ASP153 ILE154 ASP155 ALA156 GLN157 THR158 PHE159 ALA160 ASP161 TRP162 GLY163 VAL164 ASP165 LEU166 LEU167 LYS168 PHE169 ASP170 GLY171 CYS172 TYR173 CYS174 ASP175 SER176 LEU177 GLU178 ASN179 LEU180 ALA181 ASP182 GLY183 TYR184 LYS185 HIS186 MET187 SER188 LEU189 ALA190 LEU191 ASN192 ARG193 THR194 GLY195 ARG196 SER197 ILE198 VAL199 TYR200 SER201 CYS202 SER203 TRP204 PRO205 ALA206 TYR207 MET208 TRP209 PRO210 PHE211 GLN212 LYS213 PRO214 ASN215 TYR216 THR217 GLU218 ILE219 ARG220 GLN221 TYR222 CYS223 ASN224 HIS225 TRP226 ARG227 ASN228 PHE229 ALA230 ASP231 ILE232 ASP233 ASP234 SER235 TRP236 LYS237 SER238 ILE239 LYS240 SER241 ILE242 LEU243 ASP244 TRP245 THR246 SER247 PHE248 ASN249 GLN250 GLU251 ARG252 ILE253 VAL254 ASP255 VAL256 ALA257 GLY258 PRO259 GLY260 GLY261 TRP262 ASN263 ASP264 PRO265 ASP266 MET267 LEU268 VAL269 ILE270 GLY271 ASN272 PHE273 GLY274 LEU275 SER276 TRP277 ASN278 GLN279 GLN280 VAL281 THR282 GLN283 MET284 ALA285 LEU286 TRP287 ALA288 ILE289 MET290 ALA291 ALA292 PRO293 LEU294 PHE295 MET296 SER297 ASN298 ASP299 LEU300 ARG301 HIS302 ILE303 SER304 PRO305 GLN306 ALA307 LYS308 ALA309 LEU310 LEU311 GLN312 ASP313 LYS314 ASP315 VAL316 ILE317 ALA318 ILE319 ASN320 GLN321 ASP322 PRO323 LEU324 GLY325 LYS326 GLN327 GLY328 TYR329 GLN330 LEU331 ARG332 GLN333 GLY334 ASP335 ASN336 PHE337 GLU338 VAL339 TRP340 GLU341 ARG342 PRO343 LEU344 SER345 GLY346 LEU347 ALA348 TRP349 ALA350 VAL351 ALA352 MET353 ILE354 ASN355 ARG356 GLN357 GLU358 ILE359 GLY360 GLY361 PRO362 ARG363 SER364 TYR365 THR366 ILE367 ALA368 VAL369 ALA370 SER371 LEU372 GLY373 LYS374 GLY375 VAL376 ALA377 CYS378 ASN379 PRO380 ALA381 CYS382 PHE383 ILE384 THR385 GLN386 LEU387 LEU388 PRO389 VAL390 LYS391 ARG392 LYS393 LEU394 GLY395 PHE396 TYR397 GLU398 TRP399 THR400 SER401 ARG402 LEU403 ARG404 SER405 HIS406 ILE407 ASN408 PRO409 THR410 GLY411 THR412 VAL413 LEU414 LEU415 GLN416 LEU417 GLU418 ASN419 THR420 MET421 GLN422 MET423 SER424 LEU425 LYS426
Unit 2 LEU32 ASP33 ASN34 GLY35 LEU36 ALA37 ARG38 THR39 PRO40 THR41 MET42 GLY43 TRP44 LEU45 HIS46 TRP47 GLU48 ARG49 PHE50 MET51 CYS52 ASN53 LEU54 ASP55 CYS56 GLN57 GLU58 GLU59 PRO60 ASP61 SER62 CYS63 ILE64 SER65 GLU66 LYS67 LEU68 PHE69 MET70 GLU71 MET72 ALA73 GLU74 LEU75 MET76 VAL77 SER78 GLU79 GLY80 TRP81 LYS82 ASP83 ALA84 GLY85 TYR86 GLU87 TYR88 LEU89 CYS90 ILE91 ASP92 ASP93 CYS94 TRP95 MET96 ALA97 PRO98 GLN99 ARG100 ASP101 SER102 GLU103 GLY104 ARG105 LEU106 GLN107 ALA108 ASP109 PRO110 GLN111 ARG112 PHE113 PRO114 HIS115 GLY116 ILE117 ARG118 GLN119 LEU120 ALA121 ASN122 TYR123 VAL124 HIS125 SER126 LYS127 GLY128 LEU129 LYS130 LEU131 GLY132 ILE133 TYR134 ALA135 ASP136 VAL137 GLY138 ASN139 LYS140 THR141 CYS142 ALA143 GLY144 PHE145 PRO146 GLY147 SER148 PHE149 GLY150 TYR151 TYR152 ASP153 ILE154 ASP155 ALA156 GLN157 THR158 PHE159 ALA160 ASP161 TRP162 GLY163 VAL164 ASP165 LEU166 LEU167 LYS168 PHE169 ASP170 GLY171 CYS172 TYR173 CYS174 ASP175 SER176 LEU177 GLU178 ASN179 LEU180 ALA181 ASP182 GLY183 TYR184 LYS185 HIS186 MET187 SER188 LEU189 ALA190 LEU191 ASN192 ARG193 THR194 GLY195 ARG196 SER197 ILE198 VAL199 TYR200 SER201 CYS202 SER203 TRP204 PRO205 ALA206 TYR207 MET208 TRP209 PRO210 PHE211 GLN212 LYS213 PRO214 ASN215 TYR216 THR217 GLU218 ILE219 ARG220 GLN221 TYR222 CYS223 ASN224 HIS225 TRP226 ARG227 ASN228 PHE229 ALA230 ASP231 ILE232 ASP233 ASP234 SER235 TRP236 LYS237 SER238 ILE239 LYS240 SER241 ILE242 LEU243 ASP244 TRP245 THR246 SER247 PHE248 ASN249 GLN250 GLU251 ARG252 ILE253 VAL254 ASP255 VAL256 ALA257 GLY258 PRO259 GLY260 GLY261 TRP262 ASN263 ASP264 PRO265 ASP266 MET267 LEU268 VAL269 ILE270 GLY271 ASN272 PHE273 GLY274 LEU275 SER276 TRP277 ASN278 GLN279 GLN280 VAL281 THR282 GLN283 MET284 ALA285 LEU286 TRP287 ALA288 ILE289 MET290 ALA291 ALA292 PRO293 LEU294 PHE295 MET296 SER297 ASN298 ASP299 LEU300 ARG301 HIS302 ILE303 SER304 PRO305 GLN306 ALA307 LYS308 ALA309 LEU310 LEU311 GLN312 ASP313 LYS314 ASP315 VAL316 ILE317 ALA318 ILE319 ASN320 GLN321 ASP322 PRO323 LEU324 GLY325 LYS326 GLN327 GLY328 TYR329 GLN330 LEU331 ARG332 GLN333 GLY334 ASP335 ASN336 PHE337 GLU338 VAL339 TRP340 GLU341 ARG342 PRO343 LEU344 SER345 GLY346 LEU347 ALA348 TRP349 ALA350 VAL351 ALA352 MET353 ILE354 ASN355 ARG356 GLN357 GLU358 ILE359 GLY360 GLY361 PRO362 ARG363 SER364 TYR365 THR366 ILE367 ALA368 VAL369 ALA370 SER371 LEU372 GLY373 LYS374 GLY375 VAL376 ALA377 CYS378 ASN379 PRO380 ALA381 CYS382 PHE383 ILE384 THR385 GLN386 LEU387 LEU388 PRO389 VAL390 LYS391 ARG392 LYS393 LEU394 GLY395 PHE396 TYR397 GLU398 TRP399 THR400 SER401 ARG402 LEU403 ARG404 SER405 HIS406 ILE407 ASN408 PRO409 THR410 GLY411 THR412 VAL413 LEU414 LEU415 GLN416 LEU417 GLU418 ASN419 THR420 MET421 GLN422 MET423 SER424 LEU425 LYS426 ASP427

Ligands
Unit 3 NAG1 NAG2 BMA3 MAN4
Unit 4 NAG1 NAG2
Unit 5 NAG1 NAG2 BMA3 MAN4
Unit 6 NAG639 GOL802 GOL803
Unit 7 NAG639 NAG715 GOL801 GOL804 GOL811 GOL812

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany