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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE DROSOPHILA EPIDERMAL GROWTH FACTOR ECTODOMAIN IN COMPLEX WITH SPITZ
Keywords RECEPTOR-LIGAND COMPLEX ECTODOMAIN CYSTEINE RICH DOMAIN EGF ATP-BINDING, KINASE, NUCLEOTIDE-BINDING, RECEPTOR, TRANSFER TYROSINE-PROTEIN KINASE, CELL MEMBRANE, DEVELOPMENTAL PROTE DIFFERENTIATION, DISULFIDE BOND, EGF-LIKE DOMAIN, ENDOPLASM RETICULUM, GLYCOPROTEIN, GOLGI APPARATUS, MEMBRANE, NEUROGE TRANSMEMBRANE, TRANSFERASE-TRANSFERASE REGULATOR COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3LTF     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   EPIDERMAL GROWTH FACTOR RECEPTOR  A 522 4007 0
2  Protein   EPIDERMAL GROWTH FACTOR RECEPTOR  C 531 4101 0
3  Protein   PROTEIN SPITZ  D 57 450 0
4  Protein   PROTEIN SPITZ  B 57 456 0
5  Ligand    E 6 0 72
6  Ligand    F 2 0 28
7  Ligand    G 4 0 50
8  Ligand   EPIDERMAL GROWTH FACTOR RECEPTOR  A 2 0 21
9  Ligand   EPIDERMAL GROWTH FACTOR RECEPTOR  C 2 0 28
total       1183 9014 199
Proteins
Unit 1 HIS-2 HIS-1 HIS0 LYS1 ILE2 CYS3 ILE4 GLY5 THR6 LYS7 SER8 ARG9 LEU10 SER11 VAL12 PRO13 SER14 ASN15 LYS16 GLU17 HIS18 HIS19 TYR20 ARG21 ASN22 LEU23 ARG24 ASP25 ARG26 TYR27 THR28 ASN29 CYS30 THR31 TYR32 VAL33 ASP34 GLY35 ASN36 LEU37 GLU38 LEU39 THR40 TRP41 LEU42 PRO43 ASN44 GLU45 ASN46 LEU47 ASP48 LEU49 SER50 PHE51 LEU52 ASP53 ASN54 ILE55 ARG56 GLU57 VAL58 THR59 GLY60 TYR61 ILE62 LEU63 ILE64 SER65 HIS66 VAL67 ASP68 VAL69 LYS70 LYS71 VAL72 VAL73 PHE74 PRO75 LYS76 LEU77 GLN78 ILE79 ILE80 ARG81 GLY82 ARG83 THR84 LEU85 PHE86 SER87 LEU88 SER89 GLU92 GLU93 LYS94 TYR95 ALA96 LEU97 PHE98 VAL99 THR100 TYR101 SER102 LYS103 MET104 TYR105 THR106 LEU107 GLU108 ILE109 PRO110 ASP111 LEU112 ARG113 ASP114 VAL115 LEU116 ASN117 GLY118 GLN119 VAL120 GLY121 PHE122 HIS123 ASN124 ASN125 TYR126 ASN127 LEU128 CYS129 HIS130 MET131 ARG132 THR133 ILE134 GLN135 TRP136 SER137 GLU138 ILE139 VAL140 SER141 ASN142 GLY143 THR144 ASP145 ALA146 TYR147 ALA154 PRO155 GLU156 ARG157 GLU158 CYS159 PRO160 LYS161 CYS162 HIS163 GLU164 SER165 CYS166 THR167 HIS168 GLY169 CYS170 TRP171 GLY172 GLU173 GLY174 PRO175 LYS176 ASN177 CYS178 GLN179 LYS180 PHE181 SER182 LYS183 LEU184 THR185 CYS186 SER187 PRO188 GLN189 CYS190 ALA191 GLY192 GLY193 ARG194 CYS195 TYR196 GLY197 PRO198 LYS199 PRO200 ARG201 GLU202 CYS203 CYS204 HIS205 LEU206 PHE207 CYS208 ALA209 GLY210 GLY211 CYS212 THR213 GLY214 PRO215 THR216 GLN217 LYS218 ASP219 CYS220 ILE221 ALA222 CYS223 LYS224 ASN225 PHE226 PHE227 ASP228 GLU229 GLY230 VAL231 CYS232 LYS233 GLU234 GLU235 CYS236 PRO237 PRO238 MET239 ARG240 LYS241 TYR242 ASN243 PRO244 THR245 THR246 TYR247 VAL248 LEU249 GLU250 THR251 ASN252 PRO253 GLU254 GLY255 LYS256 TYR257 ALA258 TYR259 GLY260 ALA261 THR262 CYS263 VAL264 LYS265 GLU266 CYS267 PRO268 GLY269 HIS270 LEU271 LEU272 ARG273 ASP274 ASN275 GLY276 ALA277 CYS278 VAL279 ARG280 SER281 CYS282 PRO283 GLN284 ASP285 LYS286 MET287 ASP288 LYS289 GLY290 GLY291 GLU292 CYS293 VAL294 PRO295 CYS296 ASN297 GLY298 PRO299 CYS300 PRO301 LYS302 THR303 CYS304 PRO305 GLY306 VAL307 THR308 VAL309 LEU310 HIS311 ALA312 GLY313 ASN314 ILE315 ASP316 SER317 PHE318 ARG319 ASN320 CYS321 THR322 VAL323 ILE324 ASP325 GLY326 ASN327 ILE328 ARG329 ILE330 LEU331 ASP332 GLN333 THR334 PHE335 SER336 GLY337 PHE338 GLN339 ASP340 VAL341 TYR342 ALA343 ASN344 TYR345 THR346 MET347 GLY348 PRO349 ARG350 TYR351 ILE352 PRO353 LEU354 ASP355 PRO356 GLU357 ARG358 LEU359 GLU360 VAL361 PHE362 SER363 THR364 VAL365 LYS366 GLU367 ILE368 THR369 GLY370 TYR371 LEU372 ASN373 ILE374 GLU375 GLY376 THR377 HIS378 PRO379 GLN380 PHE381 ARG382 ASN383 LEU384 SER385 TYR386 PHE387 ARG388 ASN389 LEU390 GLU391 THR392 ILE393 HIS394 GLY395 ARG396 GLN397 LEU398 MET399 GLU400 SER401 MET402 PHE403 ALA404 ALA405 LEU406 ALA407 ILE408 VAL409 LYS410 SER411 SER412 LEU413 TYR414 SER415 LEU416 GLU417 MET418 ARG419 ASN420 LEU421 LYS422 GLN423 ILE424 SER425 SER426 GLY427 SER428 VAL429 VAL430 ILE431 GLN432 HIS433 ASN434 ARG435 ASP436 LEU437 CYS438 TYR439 VAL440 SER441 ASN442 ILE443 ARG444 TRP445 PRO446 ALA447 ILE448 GLN449 LYS450 GLU451 PRO452 GLU453 GLN454 LYS455 VAL456 TRP457 VAL458 ASN459 GLU460 ASN461 LEU462 ARG463 ALA464 ASP465 LEU466 CYS467 GLU468 LYS469 ASN470 GLY471 THR472 ILE473 CYS474 SER475 ASP476 GLN477 CYS478 ASN479 GLU480 ASP481 GLY482 CYS483 TRP484 GLY485 ALA486 GLY487 THR488 ASP489 GLN490 CYS491 LEU492 ASN493 CYS494 LYS495 ASN496 PHE497 ASN498 PHE499 ASN500 GLY501 THR502 CYS503 ILE504 ALA505 ASP506 CYS507 GLY508 TYR509 ILE510 SER511 ASN512 ALA513 TYR514 LYS515 PHE516 ASP517 ASN518 ARG519 THR520 CYS521 LYS522 ILE523 CYS524 HIS525 CYS531 ASN532
Unit 2 HIS0 LYS1 ILE2 CYS3 ILE4 GLY5 THR6 LYS7 SER8 ARG9 LEU10 SER11 VAL12 PRO13 SER14 ASN15 LYS16 GLU17 HIS18 HIS19 TYR20 ARG21 ASN22 LEU23 ARG24 ASP25 ARG26 TYR27 THR28 ASN29 CYS30 THR31 TYR32 VAL33 ASP34 GLY35 ASN36 LEU37 GLU38 LEU39 THR40 TRP41 LEU42 PRO43 ASN44 GLU45 ASN46 LEU47 ASP48 LEU49 SER50 PHE51 LEU52 ASP53 ASN54 ILE55 ARG56 GLU57 VAL58 THR59 GLY60 TYR61 ILE62 LEU63 ILE64 SER65 HIS66 VAL67 ASP68 VAL69 LYS70 LYS71 VAL72 VAL73 PHE74 PRO75 LYS76 LEU77 GLN78 ILE79 ILE80 ARG81 GLY82 ARG83 THR84 LEU85 PHE86 SER87 LEU88 SER89 VAL90 GLU91 GLU92 GLU93 LYS94 TYR95 ALA96 LEU97 PHE98 VAL99 THR100 TYR101 SER102 LYS103 MET104 TYR105 THR106 LEU107 GLU108 ILE109 PRO110 ASP111 LEU112 ARG113 ASP114 VAL115 LEU116 ASN117 GLY118 GLN119 VAL120 GLY121 PHE122 HIS123 ASN124 ASN125 TYR126 ASN127 LEU128 CYS129 HIS130 MET131 ARG132 THR133 ILE134 GLN135 TRP136 SER137 GLU138 ILE139 VAL140 SER141 ASN142 GLY143 THR153 ALA154 PRO155 GLU156 ARG157 GLU158 CYS159 PRO160 LYS161 CYS162 HIS163 GLU164 SER165 CYS166 THR167 HIS168 GLY169 CYS170 TRP171 GLY172 GLU173 GLY174 PRO175 LYS176 ASN177 CYS178 GLN179 LYS180 PHE181 SER182 LYS183 LEU184 THR185 CYS186 SER187 PRO188 GLN189 CYS190 ALA191 GLY192 GLY193 ARG194 CYS195 TYR196 GLY197 PRO198 LYS199 PRO200 ARG201 GLU202 CYS203 CYS204 HIS205 LEU206 PHE207 CYS208 ALA209 GLY210 GLY211 CYS212 THR213 GLY214 PRO215 THR216 GLN217 LYS218 ASP219 CYS220 ILE221 ALA222 CYS223 LYS224 ASN225 PHE226 PHE227 ASP228 GLU229 GLY230 VAL231 CYS232 LYS233 GLU234 GLU235 CYS236 PRO237 PRO238 MET239 ARG240 LYS241 TYR242 ASN243 PRO244 THR245 THR246 TYR247 VAL248 LEU249 GLU250 THR251 ASN252 PRO253 GLU254 GLY255 LYS256 TYR257 ALA258 TYR259 GLY260 ALA261 THR262 CYS263 VAL264 LYS265 GLU266 CYS267 PRO268 GLY269 HIS270 LEU271 LEU272 ARG273 ASP274 ASN275 GLY276 ALA277 CYS278 VAL279 ARG280 SER281 CYS282 PRO283 GLN284 ASP285 LYS286 MET287 ASP288 LYS289 GLY290 GLY291 GLU292 CYS293 VAL294 PRO295 CYS296 ASN297 GLY298 PRO299 CYS300 PRO301 LYS302 THR303 CYS304 PRO305 GLY306 VAL307 THR308 VAL309 LEU310 HIS311 ALA312 GLY313 ASN314 ILE315 ASP316 SER317 PHE318 ARG319 ASN320 CYS321 THR322 VAL323 ILE324 ASP325 GLY326 ASN327 ILE328 ARG329 ILE330 LEU331 ASP332 GLN333 THR334 PHE335 SER336 GLY337 PHE338 GLN339 ASP340 VAL341 TYR342 ALA343 ASN344 TYR345 THR346 MET347 GLY348 PRO349 ARG350 TYR351 ILE352 PRO353 LEU354 ASP355 PRO356 GLU357 ARG358 LEU359 GLU360 VAL361 PHE362 SER363 THR364 VAL365 LYS366 GLU367 ILE368 THR369 GLY370 TYR371 LEU372 ASN373 ILE374 GLU375 GLY376 THR377 HIS378 PRO379 GLN380 PHE381 ARG382 ASN383 LEU384 SER385 TYR386 PHE387 ARG388 ASN389 LEU390 GLU391 THR392 ILE393 HIS394 GLY395 ARG396 GLN397 LEU398 MET399 GLU400 SER401 MET402 PHE403 ALA404 ALA405 LEU406 ALA407 ILE408 VAL409 LYS410 SER411 SER412 LEU413 TYR414 SER415 LEU416 GLU417 MET418 ARG419 ASN420 LEU421 LYS422 GLN423 ILE424 SER425 SER426 GLY427 SER428 VAL429 VAL430 ILE431 GLN432 HIS433 ASN434 ARG435 ASP436 LEU437 CYS438 TYR439 VAL440 SER441 ASN442 ILE443 ARG444 TRP445 PRO446 ALA447 ILE448 GLN449 LYS450 GLU451 PRO452 GLU453 GLN454 LYS455 VAL456 TRP457 VAL458 ASN459 GLU460 ASN461 LEU462 ARG463 ALA464 ASP465 LEU466 CYS467 GLU468 LYS469 ASN470 GLY471 THR472 ILE473 CYS474 SER475 ASP476 GLN477 CYS478 ASN479 GLU480 ASP481 GLY482 CYS483 TRP484 GLY485 ALA486 GLY487 THR488 ASP489 GLN490 CYS491 LEU492 ASN493 CYS494 LYS495 ASN496 PHE497 ASN498 PHE499 ASN500 GLY501 THR502 CYS503 ILE504 ALA505 ASP506 CYS507 GLY508 TYR509 ILE510 SER511 ASN512 ALA513 TYR514 LYS515 PHE516 ASP517 ASN518 ARG519 THR520 CYS521 LYS522 ILE523 CYS524 HIS525 PRO526 GLU527 CYS528 ARG529 THR530 CYS531 ASN532 GLY533 ALA534 GLY535 ALA536 ASP537 HIS538 CYS539
Unit 3 PHE2 PRO3 THR4 TYR5 LYS6 CYS7 PRO8 GLU9 THR10 PHE11 ASP12 ALA13 TRP14 TYR15 CYS16 LEU17 ASN18 ASP19 ALA20 HIS21 CYS22 PHE23 ALA24 VAL25 LYS26 ILE27 ALA28 ASP29 LEU30 PRO31 VAL32 TYR33 SER34 CYS35 GLU36 CYS37 ALA38 ILE39 GLY40 PHE41 MET42 GLY43 GLN44 ARG45 CYS46 GLU47 TYR48 LYS49 GLU50 ILE51 ASP52 ASN53 THR54 TYR55 LEU56 PRO57 LYS58
Unit 4 PHE2 PRO3 THR4 TYR5 LYS6 CYS7 PRO8 GLU9 THR10 PHE11 ASP12 ALA13 TRP14 TYR15 CYS16 LEU17 ASN18 ASP19 ALA20 HIS21 CYS22 PHE23 ALA24 VAL25 LYS26 ILE27 ALA28 ASP29 LEU30 PRO31 VAL32 TYR33 SER34 CYS35 GLU36 CYS37 ALA38 ILE39 GLY40 PHE41 MET42 GLY43 GLN44 ARG45 CYS46 GLU47 TYR48 LYS49 GLU50 ILE51 ASP52 ASN53 THR54 TYR55 LEU56 PRO57 LYS58
Ligands
Unit 5 NAG1 NAG2 MAN3 MAN4 MAN5 MAN6
Unit 6 NAG1 NAG2
Unit 7 NAG1 NAG2 MAN3 MAN4
Unit 8 MLI596 NAG3830
Unit 9 NAG596 NAG3440
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany