3LOC - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF PUTATIVE TRANSCRIPTIONAL REGULATOR YCDC
• Keywords: HELIX-TURN-HELIX, PUTATIVE TRANSCRIPTIONAL REGULATOR, DIMER, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, NEW RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGXRC, DNA-BINDI REPRESSOR, TRANSCRIPTION, TRANSCRIPTION REGULATION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3LOC	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	A	201	1522	32
2	Protein	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	B	201	1529	32
3	Protein	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	C	200	1524	32
4	Protein	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	D	201	1532	32
5	Ligand	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	A	1	0	8
6	Ligand	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	B	1	0	8
7	Ligand	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	C	1	0	8
8	Ligand	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	D	1	0	8
9	Water			69	0	69
total				876	6107	229

Proteins

Unit 1	ARG 11 SER 12 ARG 13 ALA 14 VAL 15 SER 16 ALA 17 LYS 18 LYS 19 LYS 20 ALA 21 ILE 22 LEU 23 SER 24 ALA 25 ALA 26 LEU 27 ASP 28 THR 29 PHE 30 SER 31 GLN 32 PHE 33 GLY 34 PHE 35 HIS 36 GLY 37 THR 38 ARG 39 LEU 40 GLU 41 GLN 42 ILE 43 ALA 44 GLU 45 LEU 46 ALA 47 GLY 48 VAL 49 SER 50 LYS 51 THR 52 ASN 53 LEU 54 LEU 55 TYR 56 TYR 57 PHE 58 PRO 59 SER 60 LYS 61 GLU 62 ALA 63 LEU 64 TYR 65 ILE 66 ALA 67 VAL 68 LEU 69 ARG 70 GLN 71 ILE 72 LEU 73 ASP 74 ILE 75 TRP 76 LEU 77 ALA 78 PRO 79 LEU 80 LYS 81 ALA 82 PHE 83 ARG 84 GLU 85 ASP 86 PHE 87 ALA 88 PRO 89 LEU 90 ALA 91 ALA 92 ILE 93 LYS 94 GLU 95 TYR 96 ILE 97 ARG 98 LEU 99 LYS 100 LEU 101 GLU 102 VAL 103 SER 104 ARG 105 ASP 106 TYR 107 PRO 108 GLN 109 ALA 110 SER 111 ARG 112 LEU 113 PHE 114 CYS 115 MSE 116 GLU 117 MSE 118 LEU 119 ALA 120 GLY 121 ALA 122 PRO 123 LEU 124 LEU 125 MSE 126 ASP 127 GLU 128 LEU 129 THR 130 GLY 131 ASP 132 LEU 133 LYS 134 ALA 135 LEU 136 ILE 137 ASP 138 GLU 139 LYS 140 SER 141 ALA 142 LEU 143 ILE 144 ALA 145 GLY 146 TRP 147 VAL 148 LYS 149 SER 150 GLY 151 LYS 152 LEU 153 ALA 154 PRO 155 ILE 156 ASP 157 PRO 158 GLN 159 HIS 160 LEU 161 ILE 162 PHE 163 MSE 164 ILE 165 TRP 166 ALA 167 SER 168 THR 169 GLN 170 HIS 171 TYR 172 ALA 173 ASP 174 PHE 175 ALA 176 PRO 177 GLN 178 VAL 179 GLU 180 ALA 181 VAL 182 THR 183 GLY 184 ALA 185 THR 186 LEU 187 ARG 188 ASP 189 GLU 190 VAL 191 PHE 192 PHE 193 ASN 194 GLN 195 THR 196 VAL 197 GLU 198 ASN 199 VAL 200 GLN 201 ARG 202 ILE 203 ILE 204 ILE 205 GLU 206 GLY 207 ILE 208 ARG 209 PRO 210 ARG 211
Unit 2	ARG 11 SER 12 ARG 13 ALA 14 VAL 15 SER 16 ALA 17 LYS 18 LYS 19 LYS 20 ALA 21 ILE 22 LEU 23 SER 24 ALA 25 ALA 26 LEU 27 ASP 28 THR 29 PHE 30 SER 31 GLN 32 PHE 33 GLY 34 PHE 35 HIS 36 GLY 37 THR 38 ARG 39 LEU 40 GLU 41 GLN 42 ILE 43 ALA 44 GLU 45 LEU 46 ALA 47 GLY 48 VAL 49 SER 50 LYS 51 THR 52 ASN 53 LEU 54 LEU 55 TYR 56 TYR 57 PHE 58 PRO 59 SER 60 LYS 61 GLU 62 ALA 63 LEU 64 TYR 65 ILE 66 ALA 67 VAL 68 LEU 69 ARG 70 GLN 71 ILE 72 LEU 73 ASP 74 ILE 75 TRP 76 LEU 77 ALA 78 PRO 79 LEU 80 LYS 81 ALA 82 PHE 83 ARG 84 GLU 85 ASP 86 PHE 87 ALA 88 PRO 89 LEU 90 ALA 91 ALA 92 ILE 93 LYS 94 GLU 95 TYR 96 ILE 97 ARG 98 LEU 99 LYS 100 LEU 101 GLU 102 VAL 103 SER 104 ARG 105 ASP 106 TYR 107 PRO 108 GLN 109 ALA 110 SER 111 ARG 112 LEU 113 PHE 114 CYS 115 MSE 116 GLU 117 MSE 118 LEU 119 ALA 120 GLY 121 ALA 122 PRO 123 LEU 124 LEU 125 MSE 126 ASP 127 GLU 128 LEU 129 THR 130 GLY 131 ASP 132 LEU 133 LYS 134 ALA 135 LEU 136 ILE 137 ASP 138 GLU 139 LYS 140 SER 141 ALA 142 LEU 143 ILE 144 ALA 145 GLY 146 TRP 147 VAL 148 LYS 149 SER 150 GLY 151 LYS 152 LEU 153 ALA 154 PRO 155 ILE 156 ASP 157 PRO 158 GLN 159 HIS 160 LEU 161 ILE 162 PHE 163 MSE 164 ILE 165 TRP 166 ALA 167 SER 168 THR 169 GLN 170 HIS 171 TYR 172 ALA 173 ASP 174 PHE 175 ALA 176 PRO 177 GLN 178 VAL 179 GLU 180 ALA 181 VAL 182 THR 183 GLY 184 ALA 185 THR 186 LEU 187 ARG 188 ASP 189 GLU 190 VAL 191 PHE 192 PHE 193 ASN 194 GLN 195 THR 196 VAL 197 GLU 198 ASN 199 VAL 200 GLN 201 ARG 202 ILE 203 ILE 204 ILE 205 GLU 206 GLY 207 ILE 208 ARG 209 PRO 210 ARG 211
Unit 3	SER 12 ARG 13 ALA 14 VAL 15 SER 16 ALA 17 LYS 18 LYS 19 LYS 20 ALA 21 ILE 22 LEU 23 SER 24 ALA 25 ALA 26 LEU 27 ASP 28 THR 29 PHE 30 SER 31 GLN 32 PHE 33 GLY 34 PHE 35 HIS 36 GLY 37 THR 38 ARG 39 LEU 40 GLU 41 GLN 42 ILE 43 ALA 44 GLU 45 LEU 46 ALA 47 GLY 48 VAL 49 SER 50 LYS 51 THR 52 ASN 53 LEU 54 LEU 55 TYR 56 TYR 57 PHE 58 PRO 59 SER 60 LYS 61 GLU 62 ALA 63 LEU 64 TYR 65 ILE 66 ALA 67 VAL 68 LEU 69 ARG 70 GLN 71 ILE 72 LEU 73 ASP 74 ILE 75 TRP 76 LEU 77 ALA 78 PRO 79 LEU 80 LYS 81 ALA 82 PHE 83 ARG 84 GLU 85 ASP 86 PHE 87 ALA 88 PRO 89 LEU 90 ALA 91 ALA 92 ILE 93 LYS 94 GLU 95 TYR 96 ILE 97 ARG 98 LEU 99 LYS 100 LEU 101 GLU 102 VAL 103 SER 104 ARG 105 ASP 106 TYR 107 PRO 108 GLN 109 ALA 110 SER 111 ARG 112 LEU 113 PHE 114 CYS 115 MSE 116 GLU 117 MSE 118 LEU 119 ALA 120 GLY 121 ALA 122 PRO 123 LEU 124 LEU 125 MSE 126 ASP 127 GLU 128 LEU 129 THR 130 GLY 131 ASP 132 LEU 133 LYS 134 ALA 135 LEU 136 ILE 137 ASP 138 GLU 139 LYS 140 SER 141 ALA 142 LEU 143 ILE 144 ALA 145 GLY 146 TRP 147 VAL 148 LYS 149 SER 150 GLY 151 LYS 152 LEU 153 ALA 154 PRO 155 ILE 156 ASP 157 PRO 158 GLN 159 HIS 160 LEU 161 ILE 162 PHE 163 MSE 164 ILE 165 TRP 166 ALA 167 SER 168 THR 169 GLN 170 HIS 171 TYR 172 ALA 173 ASP 174 PHE 175 ALA 176 PRO 177 GLN 178 VAL 179 GLU 180 ALA 181 VAL 182 THR 183 GLY 184 ALA 185 THR 186 LEU 187 ARG 188 ASP 189 GLU 190 VAL 191 PHE 192 PHE 193 ASN 194 GLN 195 THR 196 VAL 197 GLU 198 ASN 199 VAL 200 GLN 201 ARG 202 ILE 203 ILE 204 ILE 205 GLU 206 GLY 207 ILE 208 ARG 209 PRO 210 ARG 211
Unit 4	ARG 11 SER 12 ARG 13 ALA 14 VAL 15 SER 16 ALA 17 LYS 18 LYS 19 LYS 20 ALA 21 ILE 22 LEU 23 SER 24 ALA 25 ALA 26 LEU 27 ASP 28 THR 29 PHE 30 SER 31 GLN 32 PHE 33 GLY 34 PHE 35 HIS 36 GLY 37 THR 38 ARG 39 LEU 40 GLU 41 GLN 42 ILE 43 ALA 44 GLU 45 LEU 46 ALA 47 GLY 48 VAL 49 SER 50 LYS 51 THR 52 ASN 53 LEU 54 LEU 55 TYR 56 TYR 57 PHE 58 PRO 59 SER 60 LYS 61 GLU 62 ALA 63 LEU 64 TYR 65 ILE 66 ALA 67 VAL 68 LEU 69 ARG 70 GLN 71 ILE 72 LEU 73 ASP 74 ILE 75 TRP 76 LEU 77 ALA 78 PRO 79 LEU 80 LYS 81 ALA 82 PHE 83 ARG 84 GLU 85 ASP 86 PHE 87 ALA 88 PRO 89 LEU 90 ALA 91 ALA 92 ILE 93 LYS 94 GLU 95 TYR 96 ILE 97 ARG 98 LEU 99 LYS 100 LEU 101 GLU 102 VAL 103 SER 104 ARG 105 ASP 106 TYR 107 PRO 108 GLN 109 ALA 110 SER 111 ARG 112 LEU 113 PHE 114 CYS 115 MSE 116 GLU 117 MSE 118 LEU 119 ALA 120 GLY 121 ALA 122 PRO 123 LEU 124 LEU 125 MSE 126 ASP 127 GLU 128 LEU 129 THR 130 GLY 131 ASP 132 LEU 133 LYS 134 ALA 135 LEU 136 ILE 137 ASP 138 GLU 139 LYS 140 SER 141 ALA 142 LEU 143 ILE 144 ALA 145 GLY 146 TRP 147 VAL 148 LYS 149 SER 150 GLY 151 LYS 152 LEU 153 ALA 154 PRO 155 ILE 156 ASP 157 PRO 158 GLN 159 HIS 160 LEU 161 ILE 162 PHE 163 MSE 164 ILE 165 TRP 166 ALA 167 SER 168 THR 169 GLN 170 HIS 171 TYR 172 ALA 173 ASP 174 PHE 175 ALA 176 PRO 177 GLN 178 VAL 179 GLU 180 ALA 181 VAL 182 THR 183 GLY 184 ALA 185 THR 186 LEU 187 ARG 188 ASP 189 GLU 190 VAL 191 PHE 192 PHE 193 ASN 194 GLN 195 THR 196 VAL 197 GLU 198 ASN 199 VAL 200 GLN 201 ARG 202 ILE 203 ILE 204 ILE 205 GLU 206 GLY 207 ILE 208 ARG 209 PRO 210 ARG 211

Ligands

Unit 5	URA 212
Unit 6	URA 212
Unit 7	URA 212
Unit 8	URA 212