3LNZ - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HUMAN MDM2 WITH A 12-MER PEPTIDE INHIBI (N8A MUTANT)
• Keywords: P53-BINDING PROTEIN OF MDM2, ONCOPROTEIN MDM2, HUMAN DOUBLE PROTEIN, HDM2, MDM2-PEPTIDE INHIBITOR COMPLEX, P53 PEPTIDE N8A-PMI, HOST-VIRUS INTERACTION, LIGASE, METAL-BINDING, NUC PHOSPHOPROTEIN, PROTO-ONCOGENE, UBL CONJUGATION PATHWAY, ZI FINGER, LIGASE-LIGASE INHIBITOR COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3LNZ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	E3 UBIQUITIN-PROTEIN LIGASE MDM2	A	85	706	0
2	Protein	12-MER PEPTIDE INHIBITOR	B	11	91	0
3	Protein	E3 UBIQUITIN-PROTEIN LIGASE MDM2	C	82	682	0
4	Protein	12-MER PEPTIDE INHIBITOR	D	11	91	0
5	Protein	E3 UBIQUITIN-PROTEIN LIGASE MDM2	E	82	682	0
6	Protein	12-MER PEPTIDE INHIBITOR	F	11	91	0
7	Protein	E3 UBIQUITIN-PROTEIN LIGASE MDM2	G	84	696	0
8	Protein	12-MER PEPTIDE INHIBITOR	H	12	99	0
9	Protein	E3 UBIQUITIN-PROTEIN LIGASE MDM2	I	83	689	0
10	Protein	12-MER PEPTIDE INHIBITOR	J	11	91	0
11	Protein	E3 UBIQUITIN-PROTEIN LIGASE MDM2	K	83	689	0
12	Protein	12-MER PEPTIDE INHIBITOR	L	12	99	0
13	Protein	E3 UBIQUITIN-PROTEIN LIGASE MDM2	M	83	689	0
14	Protein	12-MER PEPTIDE INHIBITOR	N	11	91	0
15	Protein	E3 UBIQUITIN-PROTEIN LIGASE MDM2	O	83	689	0
16	Protein	12-MER PEPTIDE INHIBITOR	P	11	91	0
17	Ligand	E3 UBIQUITIN-PROTEIN LIGASE MDM2	A	1	0	1
18	Ligand	E3 UBIQUITIN-PROTEIN LIGASE MDM2	C	1	0	1
19	Ligand	E3 UBIQUITIN-PROTEIN LIGASE MDM2	E	1	0	1
20	Ligand	E3 UBIQUITIN-PROTEIN LIGASE MDM2	G	1	0	1
21	Ligand	E3 UBIQUITIN-PROTEIN LIGASE MDM2	I	1	0	1
22	Ligand	E3 UBIQUITIN-PROTEIN LIGASE MDM2	K	1	0	1
23	Ligand	E3 UBIQUITIN-PROTEIN LIGASE MDM2	M	2	0	2
24	Water			702	0	702
total				1465	6266	710

Proteins

Unit 1	GLU 25 THR 26 LEU 27 VAL 28 ARG 29 PRO 30 LYS 31 PRO 32 LEU 33 LEU 34 LEU 35 LYS 36 LEU 37 LEU 38 LYS 39 SER 40 VAL 41 GLY 42 ALA 43 GLN 44 LYS 45 ASP 46 THR 47 TYR 48 THR 49 MET 50 LYS 51 GLU 52 VAL 53 LEU 54 PHE 55 TYR 56 LEU 57 GLY 58 GLN 59 TYR 60 ILE 61 MET 62 THR 63 LYS 64 ARG 65 LEU 66 TYR 67 ASP 68 GLU 69 LYS 70 GLN 71 GLN 72 HIS 73 ILE 74 VAL 75 TYR 76 CYS 77 SER 78 ASN 79 ASP 80 LEU 81 LEU 82 GLY 83 ASP 84 LEU 85 PHE 86 GLY 87 VAL 88 PRO 89 SER 90 PHE 91 SER 92 VAL 93 LYS 94 GLU 95 HIS 96 ARG 97 LYS 98 ILE 99 TYR 100 THR 101 MET 102 ILE 103 TYR 104 ARG 105 ASN 106 LEU 107 VAL 108 VAL 109
Unit 2	THR 1 SER 2 PHE 3 ALA 4 GLU 5 TYR 6 TRP 7 ALA 8 LEU 9 LEU 10 SER 11
Unit 3	LEU 27 VAL 28 ARG 29 PRO 30 LYS 31 PRO 32 LEU 33 LEU 34 LEU 35 LYS 36 LEU 37 LEU 38 LYS 39 SER 40 VAL 41 GLY 42 ALA 43 GLN 44 LYS 45 ASP 46 THR 47 TYR 48 THR 49 MET 50 LYS 51 GLU 52 VAL 53 LEU 54 PHE 55 TYR 56 LEU 57 GLY 58 GLN 59 TYR 60 ILE 61 MET 62 THR 63 LYS 64 ARG 65 LEU 66 TYR 67 ASP 68 GLU 69 LYS 70 GLN 71 GLN 72 HIS 73 ILE 74 VAL 75 TYR 76 CYS 77 SER 78 ASN 79 ASP 80 LEU 81 LEU 82 GLY 83 ASP 84 LEU 85 PHE 86 GLY 87 VAL 88 PRO 89 SER 90 PHE 91 SER 92 VAL 93 LYS 94 GLU 95 HIS 96 ARG 97 LYS 98 ILE 99 TYR 100 THR 101 MET 102 ILE 103 TYR 104 ARG 105 ASN 106 LEU 107 VAL 108
Unit 4	THR 1 SER 2 PHE 3 ALA 4 GLU 5 TYR 6 TRP 7 ALA 8 LEU 9 LEU 10 SER 11
Unit 5	LEU 27 VAL 28 ARG 29 PRO 30 LYS 31 PRO 32 LEU 33 LEU 34 LEU 35 LYS 36 LEU 37 LEU 38 LYS 39 SER 40 VAL 41 GLY 42 ALA 43 GLN 44 LYS 45 ASP 46 THR 47 TYR 48 THR 49 MET 50 LYS 51 GLU 52 VAL 53 LEU 54 PHE 55 TYR 56 LEU 57 GLY 58 GLN 59 TYR 60 ILE 61 MET 62 THR 63 LYS 64 ARG 65 LEU 66 TYR 67 ASP 68 GLU 69 LYS 70 GLN 71 GLN 72 HIS 73 ILE 74 VAL 75 TYR 76 CYS 77 SER 78 ASN 79 ASP 80 LEU 81 LEU 82 GLY 83 ASP 84 LEU 85 PHE 86 GLY 87 VAL 88 PRO 89 SER 90 PHE 91 SER 92 VAL 93 LYS 94 GLU 95 HIS 96 ARG 97 LYS 98 ILE 99 TYR 100 THR 101 MET 102 ILE 103 TYR 104 ARG 105 ASN 106 LEU 107 VAL 108
Unit 6	THR 1 SER 2 PHE 3 ALA 4 GLU 5 TYR 6 TRP 7 ALA 8 LEU 9 LEU 10 SER 11
Unit 7	THR 26 LEU 27 VAL 28 ARG 29 PRO 30 LYS 31 PRO 32 LEU 33 LEU 34 LEU 35 LYS 36 LEU 37 LEU 38 LYS 39 SER 40 VAL 41 GLY 42 ALA 43 GLN 44 LYS 45 ASP 46 THR 47 TYR 48 THR 49 MET 50 LYS 51 GLU 52 VAL 53 LEU 54 PHE 55 TYR 56 LEU 57 GLY 58 GLN 59 TYR 60 ILE 61 MET 62 THR 63 LYS 64 ARG 65 LEU 66 TYR 67 ASP 68 GLU 69 LYS 70 GLN 71 GLN 72 HIS 73 ILE 74 VAL 75 TYR 76 CYS 77 SER 78 ASN 79 ASP 80 LEU 81 LEU 82 GLY 83 ASP 84 LEU 85 PHE 86 GLY 87 VAL 88 PRO 89 SER 90 PHE 91 SER 92 VAL 93 LYS 94 GLU 95 HIS 96 ARG 97 LYS 98 ILE 99 TYR 100 THR 101 MET 102 ILE 103 TYR 104 ARG 105 ASN 106 LEU 107 VAL 108 VAL 109
Unit 8	THR 1 SER 2 PHE 3 ALA 4 GLU 5 TYR 6 TRP 7 ALA 8 LEU 9 LEU 10 SER 11 PRO 12
Unit 9	THR 26 LEU 27 VAL 28 ARG 29 PRO 30 LYS 31 PRO 32 LEU 33 LEU 34 LEU 35 LYS 36 LEU 37 LEU 38 LYS 39 SER 40 VAL 41 GLY 42 ALA 43 GLN 44 LYS 45 ASP 46 THR 47 TYR 48 THR 49 MET 50 LYS 51 GLU 52 VAL 53 LEU 54 PHE 55 TYR 56 LEU 57 GLY 58 GLN 59 TYR 60 ILE 61 MET 62 THR 63 LYS 64 ARG 65 LEU 66 TYR 67 ASP 68 GLU 69 LYS 70 GLN 71 GLN 72 HIS 73 ILE 74 VAL 75 TYR 76 CYS 77 SER 78 ASN 79 ASP 80 LEU 81 LEU 82 GLY 83 ASP 84 LEU 85 PHE 86 GLY 87 VAL 88 PRO 89 SER 90 PHE 91 SER 92 VAL 93 LYS 94 GLU 95 HIS 96 ARG 97 LYS 98 ILE 99 TYR 100 THR 101 MET 102 ILE 103 TYR 104 ARG 105 ASN 106 LEU 107 VAL 108
Unit 10	THR 1 SER 2 PHE 3 ALA 4 GLU 5 TYR 6 TRP 7 ALA 8 LEU 9 LEU 10 SER 11
Unit 11	THR 26 LEU 27 VAL 28 ARG 29 PRO 30 LYS 31 PRO 32 LEU 33 LEU 34 LEU 35 LYS 36 LEU 37 LEU 38 LYS 39 SER 40 VAL 41 GLY 42 ALA 43 GLN 44 LYS 45 ASP 46 THR 47 TYR 48 THR 49 MET 50 LYS 51 GLU 52 VAL 53 LEU 54 PHE 55 TYR 56 LEU 57 GLY 58 GLN 59 TYR 60 ILE 61 MET 62 THR 63 LYS 64 ARG 65 LEU 66 TYR 67 ASP 68 GLU 69 LYS 70 GLN 71 GLN 72 HIS 73 ILE 74 VAL 75 TYR 76 CYS 77 SER 78 ASN 79 ASP 80 LEU 81 LEU 82 GLY 83 ASP 84 LEU 85 PHE 86 GLY 87 VAL 88 PRO 89 SER 90 PHE 91 SER 92 VAL 93 LYS 94 GLU 95 HIS 96 ARG 97 LYS 98 ILE 99 TYR 100 THR 101 MET 102 ILE 103 TYR 104 ARG 105 ASN 106 LEU 107 VAL 108
Unit 12	THR 1 SER 2 PHE 3 ALA 4 GLU 5 TYR 6 TRP 7 ALA 8 LEU 9 LEU 10 SER 11 PRO 12
Unit 13	LEU 27 VAL 28 ARG 29 PRO 30 LYS 31 PRO 32 LEU 33 LEU 34 LEU 35 LYS 36 LEU 37 LEU 38 LYS 39 SER 40 VAL 41 GLY 42 ALA 43 GLN 44 LYS 45 ASP 46 THR 47 TYR 48 THR 49 MET 50 LYS 51 GLU 52 VAL 53 LEU 54 PHE 55 TYR 56 LEU 57 GLY 58 GLN 59 TYR 60 ILE 61 MET 62 THR 63 LYS 64 ARG 65 LEU 66 TYR 67 ASP 68 GLU 69 LYS 70 GLN 71 GLN 72 HIS 73 ILE 74 VAL 75 TYR 76 CYS 77 SER 78 ASN 79 ASP 80 LEU 81 LEU 82 GLY 83 ASP 84 LEU 85 PHE 86 GLY 87 VAL 88 PRO 89 SER 90 PHE 91 SER 92 VAL 93 LYS 94 GLU 95 HIS 96 ARG 97 LYS 98 ILE 99 TYR 100 THR 101 MET 102 ILE 103 TYR 104 ARG 105 ASN 106 LEU 107 VAL 108 VAL 109
Unit 14	THR 1 SER 2 PHE 3 ALA 4 GLU 5 TYR 6 TRP 7 ALA 8 LEU 9 LEU 10 SER 11
Unit 15	THR 26 LEU 27 VAL 28 ARG 29 PRO 30 LYS 31 PRO 32 LEU 33 LEU 34 LEU 35 LYS 36 LEU 37 LEU 38 LYS 39 SER 40 VAL 41 GLY 42 ALA 43 GLN 44 LYS 45 ASP 46 THR 47 TYR 48 THR 49 MET 50 LYS 51 GLU 52 VAL 53 LEU 54 PHE 55 TYR 56 LEU 57 GLY 58 GLN 59 TYR 60 ILE 61 MET 62 THR 63 LYS 64 ARG 65 LEU 66 TYR 67 ASP 68 GLU 69 LYS 70 GLN 71 GLN 72 HIS 73 ILE 74 VAL 75 TYR 76 CYS 77 SER 78 ASN 79 ASP 80 LEU 81 LEU 82 GLY 83 ASP 84 LEU 85 PHE 86 GLY 87 VAL 88 PRO 89 SER 90 PHE 91 SER 92 VAL 93 LYS 94 GLU 95 HIS 96 ARG 97 LYS 98 ILE 99 TYR 100 THR 101 MET 102 ILE 103 TYR 104 ARG 105 ASN 106 LEU 107 VAL 108
Unit 16	THR 1 SER 2 PHE 3 ALA 4 GLU 5 TYR 6 TRP 7 ALA 8 LEU 9 LEU 10 SER 11

Ligands

Unit 17	CL 5
Unit 18	CL 8
Unit 19	CL 2
Unit 20	CL 4
Unit 21	CL 1
Unit 22	CL 7
Unit 23	CL 3 CL 6