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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF LIGAND BOUND XYLULOSE KINASE FROM LACTOBACILLUS ACIDOPHILUS
Keywords XYLULOSE KINASE, 11120E1, NYSGX, ATP, ADP, XYLULOSE, KINASE, TRANSFERASE, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GEN NYSGXRC
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3LL3     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GLUCONATE KINASE  A 492 3725 80
2  Protein   GLUCONATE KINASE  B 490 3715 80
3  Ligand   GLUCONATE KINASE  A 3 0 54
4  Ligand   GLUCONATE KINASE  B 2 0 40
5 Water     627 0 627
total       1614 7440 881
Proteins
Unit 1 SER0 LEU1 LYS2 TYR3 ILE4 ILE5 GLY6 MSE7 ASP8 VAL9 GLY10 THR11 THR12 ALA13 THR14 LYS15 GLY16 VAL17 LEU18 TYR19 ASP20 ILE21 ASN22 GLY23 LYS24 ALA25 VAL26 ALA27 SER28 VAL29 SER30 LYS31 GLY32 TYR33 PRO34 LEU35 ILE36 GLN37 THR38 LYS39 VAL40 GLY41 GLN42 ALA43 GLU44 GLU45 ASP46 PRO47 LYS48 LEU49 ILE50 PHE51 ASP52 ALA53 VAL54 GLN55 GLU56 ILE57 ILE58 PHE59 ASP60 LEU61 THR62 GLN63 LYS64 ILE65 ASP66 GLY67 LYS68 ILE69 ALA70 ALA71 ILE72 SER73 TRP74 SER75 SER76 GLN77 MSE78 HIS79 SER80 LEU81 ILE82 GLY83 LEU84 GLY85 SER86 ASP87 ASP88 GLU89 LEU90 LEU91 THR92 ASN93 SER94 ILE95 THR96 TRP97 ALA98 ASP99 ASN100 CYS101 ALA102 LYS103 SER104 ILE105 VAL106 GLN107 ASP108 ALA109 LYS110 ASN111 ARG112 GLY113 PHE114 ALA115 GLN116 GLN117 ILE118 TYR119 ARG120 LYS121 THR122 GLY123 MSE124 PRO125 MSE126 HIS127 PRO128 MSE129 ALA130 PRO131 ILE132 TYR133 LYS134 LEU135 LEU136 TRP137 LEU138 LYS139 ASN140 LYS141 LYS142 THR143 GLU144 VAL145 PHE146 SER147 GLN148 ALA149 GLN150 LYS151 TRP152 ILE153 GLY154 ILE155 LYS156 GLU157 TYR158 ILE159 ILE160 PHE161 ARG162 LEU163 THR164 GLY165 LYS166 LEU167 VAL168 THR169 ASP170 THR171 THR172 MSE173 ALA174 ALA175 GLY176 THR177 GLY178 ILE179 LEU180 ASN181 LEU182 LYS183 THR184 LEU185 THR186 TRP187 ASP188 GLN189 GLU190 LEU191 LEU192 ASP193 ILE194 LEU195 LYS196 ILE197 LYS198 LYS199 GLU200 GLN201 LEU202 PRO203 LYS204 ILE205 ALA206 GLN207 PRO208 THR209 LYS210 VAL211 ILE212 PHE213 PRO214 ILE215 LYS216 THR217 GLU218 TYR219 VAL220 LYS221 LYS222 LEU223 GLY224 ILE225 ASP226 SER227 ASP228 THR229 LYS230 ILE231 ILE232 LEU233 GLY234 ALA235 SER236 ASP237 GLY238 TYR239 LEU240 SER241 THR242 ILE243 GLY244 VAL245 ASN246 ALA247 ILE248 ASP249 SER250 ASP251 HIS252 CYS253 ALA254 LEU255 ASN256 VAL257 GLY258 THR259 SER260 GLY261 ALA262 ILE263 ARG264 THR265 ILE266 VAL267 ASP268 GLN269 PRO270 LYS271 ILE272 ASP273 PRO274 SER275 ALA276 SER277 TYR278 PHE279 CYS280 TYR281 PRO282 ALA283 ASP284 LYS285 THR286 HIS287 TYR288 LEU289 LEU290 GLY291 GLY292 PRO293 VAL294 ASN295 ASN296 GLY297 GLY298 ILE299 VAL300 PHE301 ASN302 TRP303 ALA304 ARG305 GLN306 THR307 LEU308 PHE309 ASP310 ALA311 ASP312 GLU313 THR314 PRO315 GLN316 ASP317 PHE318 LEU319 ASP320 VAL321 ALA322 GLN323 THR324 ALA325 PRO326 ALA327 GLY328 SER329 ARG330 ASN331 LEU332 ILE333 PHE334 LEU335 PRO336 TYR337 LEU338 GLY339 GLY340 GLU341 ARG342 ALA343 PRO344 ILE345 TRP346 ASP347 ALA348 ASN349 ALA350 ARG351 GLY352 SER353 PHE354 VAL355 GLY356 LEU357 THR358 ARG359 MSE360 HIS361 GLN362 LYS363 PRO364 GLU365 MSE366 ALA367 ARG368 ALA369 VAL370 ILE371 GLU372 GLY373 ILE374 ILE375 PHE376 ASN377 LEU378 TYR379 ASP380 ALA381 ALA382 SER383 ASN384 LEU385 ILE386 LYS387 ASN388 THR389 LYS390 LYS391 PRO392 VAL393 ALA394 ILE395 ASN396 ALA397 THR398 GLY399 GLY400 PHE401 LEU402 LYS403 SER404 ASP405 PHE406 VAL407 ARG408 GLN409 LEU410 CYS411 ALA412 ASN413 ILE414 PHE415 ASN416 VAL417 PRO418 ILE419 VAL420 THR421 MSE422 LYS423 GLU424 GLN425 GLN426 SER427 GLY428 THR429 LEU430 ALA431 ALA432 MSE433 PHE434 LEU435 ALA436 ARG437 GLN438 ALA439 LEU440 GLY441 LEU442 ASN443 GLN444 ASP445 LEU446 SER447 GLU448 ILE449 GLY450 GLN451 PHE452 ALA453 GLN454 ALA455 ASP456 LYS457 VAL458 TYR459 PHE460 PRO461 ASN462 PRO463 LYS464 GLU465 ALA466 ALA467 THR468 TYR469 GLN470 LYS471 LEU472 PHE473 PRO474 LEU475 TYR476 CYS477 GLU478 ILE479 ARG480 ASN481 ALA482 LEU483 ALA484 ALA485 SER486 TYR487 GLY488 LYS489 PHE490 SER491
Unit 2 LEU1 LYS2 TYR3 ILE4 ILE5 GLY6 MSE7 ASP8 VAL9 GLY10 THR11 THR12 ALA13 THR14 LYS15 GLY16 VAL17 LEU18 TYR19 ASP20 ILE21 ASN22 GLY23 LYS24 ALA25 VAL26 ALA27 SER28 VAL29 SER30 LYS31 GLY32 TYR33 PRO34 LEU35 ILE36 GLN37 THR38 LYS39 VAL40 GLY41 GLN42 ALA43 GLU44 GLU45 ASP46 PRO47 LYS48 LEU49 ILE50 PHE51 ASP52 ALA53 VAL54 GLN55 GLU56 ILE57 ILE58 PHE59 ASP60 LEU61 THR62 GLN63 LYS64 ILE65 ASP66 GLY67 LYS68 ILE69 ALA70 ALA71 ILE72 SER73 TRP74 SER75 SER76 GLN77 MSE78 HIS79 SER80 LEU81 ILE82 GLY83 LEU84 GLY85 SER86 ASP87 ASP88 GLU89 LEU90 LEU91 THR92 ASN93 SER94 ILE95 THR96 TRP97 ALA98 ASP99 ASN100 CYS101 ALA102 LYS103 SER104 ILE105 VAL106 GLN107 ASP108 ALA109 LYS110 ASN111 ARG112 GLY113 PHE114 ALA115 GLN116 GLN117 ILE118 TYR119 ARG120 LYS121 THR122 GLY123 MSE124 PRO125 MSE126 HIS127 PRO128 MSE129 ALA130 PRO131 ILE132 TYR133 LYS134 LEU135 LEU136 TRP137 LEU138 LYS139 ASN140 LYS141 LYS142 THR143 GLU144 VAL145 PHE146 SER147 GLN148 ALA149 GLN150 LYS151 TRP152 ILE153 GLY154 ILE155 LYS156 GLU157 TYR158 ILE159 ILE160 PHE161 ARG162 LEU163 THR164 GLY165 LYS166 LEU167 VAL168 THR169 ASP170 THR171 THR172 MSE173 ALA174 ALA175 GLY176 THR177 GLY178 ILE179 LEU180 ASN181 LEU182 LYS183 THR184 LEU185 THR186 TRP187 ASP188 GLN189 GLU190 LEU191 LEU192 ASP193 ILE194 LEU195 LYS196 ILE197 LYS198 LYS199 GLU200 GLN201 LEU202 PRO203 LYS204 ILE205 ALA206 GLN207 PRO208 THR209 LYS210 VAL211 ILE212 PHE213 PRO214 ILE215 LYS216 THR217 GLU218 TYR219 VAL220 LYS221 LYS222 LEU223 GLY224 ILE225 ASP226 SER227 ASP228 THR229 LYS230 ILE231 ILE232 LEU233 GLY234 ALA235 SER236 ASP237 GLY238 TYR239 LEU240 SER241 THR242 ILE243 GLY244 VAL245 ASN246 ALA247 ILE248 ASP249 SER250 ASP251 HIS252 CYS253 ALA254 LEU255 ASN256 VAL257 GLY258 THR259 SER260 GLY261 ALA262 ILE263 ARG264 THR265 ILE266 VAL267 ASP268 GLN269 PRO270 LYS271 ILE272 ASP273 PRO274 SER275 ALA276 SER277 TYR278 PHE279 CYS280 TYR281 PRO282 ALA283 ASP284 LYS285 THR286 HIS287 TYR288 LEU289 LEU290 GLY291 GLY292 PRO293 VAL294 ASN295 ASN296 GLY297 GLY298 ILE299 VAL300 PHE301 ASN302 TRP303 ALA304 ARG305 GLN306 THR307 LEU308 PHE309 ALA311 ASP312 GLU313 THR314 PRO315 GLN316 ASP317 PHE318 LEU319 ASP320 VAL321 ALA322 GLN323 THR324 ALA325 PRO326 ALA327 GLY328 SER329 ARG330 ASN331 LEU332 ILE333 PHE334 LEU335 PRO336 TYR337 LEU338 GLY339 GLY340 GLU341 ARG342 ALA343 PRO344 ILE345 TRP346 ASP347 ALA348 ASN349 ALA350 ARG351 GLY352 SER353 PHE354 VAL355 GLY356 LEU357 THR358 ARG359 MSE360 HIS361 GLN362 LYS363 PRO364 GLU365 MSE366 ALA367 ARG368 ALA369 VAL370 ILE371 GLU372 GLY373 ILE374 ILE375 PHE376 ASN377 LEU378 TYR379 ASP380 ALA381 ALA382 SER383 ASN384 LEU385 ILE386 LYS387 ASN388 THR389 LYS390 LYS391 PRO392 VAL393 ALA394 ILE395 ASN396 ALA397 THR398 GLY399 GLY400 PHE401 LEU402 LYS403 SER404 ASP405 PHE406 VAL407 ARG408 GLN409 LEU410 CYS411 ALA412 ASN413 ILE414 PHE415 ASN416 VAL417 PRO418 ILE419 VAL420 THR421 MSE422 LYS423 GLU424 GLN425 GLN426 SER427 GLY428 THR429 LEU430 ALA431 ALA432 MSE433 PHE434 LEU435 ALA436 ARG437 GLN438 ALA439 LEU440 GLY441 LEU442 ASN443 GLN444 ASP445 LEU446 SER447 GLU448 ILE449 GLY450 GLN451 PHE452 ALA453 GLN454 ALA455 ASP456 LYS457 VAL458 TYR459 PHE460 PRO461 ASN462 PRO463 LYS464 GLU465 ALA466 ALA467 THR468 TYR469 GLN470 LYS471 LEU472 PHE473 PRO474 LEU475 TYR476 CYS477 GLU478 ILE479 ARG480 ASN481 ALA482 LEU483 ALA484 ALA485 SER486 TYR487 GLY488 LYS489 PHE490 SER491
Ligands
Unit 3 ATP1760 DXP3264 XUL7778
Unit 4 ADP1761 DXP3265
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany