3LEV - Sequence, Chains, Asymmetric and Biological Units

• Title: HIV-1 ANTIBODY 2F5 IN COMPLEX WITH EPITOPE SCAFFOLD ES2
• Keywords: HIV-1, GP41, MONOCLONAL ANTIBODY, 2F5, SCAFFOLD, EPITOPE, TR GRAFT, SIGMA FACTOR, RE-ELICITATION, IMMUNE SYSTEM, VACCINE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3LEV	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	RNA POLYMERASE SIGMA FACTOR	A	177	1408	0
2	Protein	2F5 ANTIBODY LIGHT CHAIN	L	214	1640	0
3	Protein	2F5 ANTIBODY HEAVY CHAIN	H	237	1773	0
4	Ligand	2F5 ANTIBODY LIGHT CHAIN	L	1	0	16
5	Ligand	2F5 ANTIBODY HEAVY CHAIN	H	2	0	37
6	Water			97	0	97
total				728	4821	150

Proteins

Unit 1	SER 93 ASP 94 PRO 95 VAL 96 ARG 97 GLN 98 TYR 99 LEU 100 HIS 101 GLU 102 ILE 103 GLY 104 GLU 105 VAL 106 LEU 107 GLU 108 LEU 109 ASP 110 LYS 111 TRP 112 ALA 113 GLU 114 LEU 115 GLY 116 ALA 117 ALA 118 ALA 119 LYS 120 VAL 121 GLU 122 GLU 123 GLY 124 MET 125 GLU 126 ALA 127 ILE 128 LYS 129 LYS 130 LEU 131 SER 132 GLU 133 ALA 134 THR 135 GLY 136 LEU 137 ASP 138 GLN 139 GLU 140 LEU 141 ILE 142 ARG 143 GLU 144 VAL 145 VAL 146 ARG 147 ALA 148 LYS 149 ILE 150 LEU 151 GLY 152 THR 153 ALA 154 ALA 155 ILE 156 GLN 157 LYS 158 ILE 159 PRO 160 GLY 161 LEU 162 LYS 163 GLU 164 LYS 165 PRO 166 ASP 167 PRO 168 LYS 169 THR 170 VAL 171 GLU 172 GLU 173 VAL 174 ASP 175 GLY 176 LYS 177 LEU 178 LYS 179 SER 180 LEU 181 PRO 182 LYS 183 GLU 184 LEU 185 LYS 186 ARG 187 TYR 188 LEU 189 HIS 190 ILE 191 ALA 192 ARG 193 GLU 194 GLY 195 GLU 196 ALA 197 ALA 198 ARG 199 GLN 200 HIS 201 LEU 202 ILE 203 GLU 204 ALA 205 ASN 206 LEU 207 ARG 208 LEU 209 VAL 210 VAL 211 SER 212 ILE 213 ALA 214 LYS 215 LYS 216 TYR 217 THR 218 GLY 219 ARG 220 GLY 221 LEU 222 SER 223 PHE 224 LEU 225 ASP 226 LEU 227 ILE 228 GLN 229 GLU 230 GLY 231 ASN 232 GLN 233 GLY 234 LEU 235 ILE 236 ARG 237 ALA 238 VAL 239 GLU 240 LYS 241 PHE 242 GLU 243 TYR 244 LYS 245 ARG 246 GLY 247 PHE 248 ALA 249 PHE 250 SER 251 THR 252 TYR 253 ALA 254 THR 255 TRP 256 TRP 257 ILE 258 ARG 259 GLN 260 ALA 261 ILE 262 ASN 263 ARG 264 ALA 265 ILE 266 ALA 267 ASP 268 GLN 269
Unit 2	ALA 1 LEU 2 GLN 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 VAL 15 GLY 16 ASP 17 ARG 18 ILE 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 GLY 28 VAL 29 THR 30 SER 31 ALA 32 LEU 33 ALA 34 TRP 35 TYR 36 ARG 37 GLN 38 LYS 39 PRO 40 GLY 41 SER 42 PRO 43 PRO 44 GLN 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ALA 51 SER 52 SER 53 LEU 54 GLU 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLU 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 SER 76 THR 77 LEU 78 ARG 79 PRO 80 GLU 81 ASP 82 PHE 83 ALA 84 THR 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 LEU 91 HIS 92 PHE 93 TYR 94 PRO 95 HIS 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 ARG 103 VAL 104 ASP 105 VAL 106 ARG 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 GLY 212 GLU 213 CYS 214
Unit 3	ARG 1 ILE 2 THR 3 LEU 4 LYS 5 GLU 6 SER 7 GLY 8 PRO 9 PRO 10 LEU 11 VAL 12 LYS 13 PRO 14 THR 15 GLN 16 THR 17 LEU 18 THR 19 LEU 20 THR 21 CYS 22 SER 23 PHE 24 SER 25 GLY 26 PHE 27 SER 28 LEU 29 SER 30 ASP 31 PHE 32 GLY 33 VAL 34 GLY 35 VAL 35A GLY 35B TRP 36 ILE 37 ARG 38 GLN 39 PRO 40 PRO 41 GLY 42 LYS 43 ALA 44 LEU 45 GLU 46 TRP 47 LEU 48 ALA 49 ILE 50 ILE 51 TYR 52 SER 53 ASP 54 ASP 55 ASP 56 LYS 57 ARG 58 TYR 59 SER 60 PRO 61 SER 62 LEU 63 ASN 64 THR 65 ARG 66 LEU 67 THR 68 ILE 69 THR 70 LYS 71 ASP 72 THR 73 SER 74 LYS 75 ASN 76 GLN 77 VAL 78 VAL 79 LEU 80 VAL 81 MET 82 THR 82A ARG 82B VAL 82C SER 83 PRO 84 VAL 85 ASP 86 THR 87 ALA 88 THR 89 TYR 90 PHE 91 CYS 92 ALA 93 HIS 94 ARG 95 ARG 96 GLY 97 PRO 98 THR 99 THR 100 LEU 100A PHE 100B GLY 100C VAL 100D PRO 100E ILE 100F ALA 100G ARG 100H GLY 100I PRO 100J VAL 100K ASN 100L ALA 100M MET 100N ASP 101 VAL 102 TRP 103 GLY 104 GLN 105 GLY 106 ILE 107 THR 108 VAL 109 THR 110 ILE 111 SER 112 SER 113 THR 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 SER 127 SER 128 LYS 129 SER 130 THR 131 SER 132 GLY 133 GLY 134 THR 135 ALA 136 ALA 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 ASP 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 SER 153 TRP 154 ASN 155 SER 156 GLY 157 ALA 158 LEU 159 THR 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 THR 183 VAL 184 PRO 185 SER 186 SER 187 SER 188 LEU 189 GLY 190 THR 191 GLN 192 THR 193 TYR 194 ILE 195 CYS 196 ASN 197 VAL 198 ASN 199 HIS 200 LYS 201 PRO 202 SER 203 ASN 204 THR 205 LYS 206 VAL 207 ASP 208 LYS 209 LYS 210 VAL 211 GLU 212 PRO 213 LYS 214 SER 215 CYS 216 ASP 217 LYS 218

Ligands

Unit 4	1PE 215
Unit 5	ATP 219 GOL 220