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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DIHYDRODIPICOLINATE SYNTHASE FROM CAMPY JEJUNI SUBSP. JEJUNI NCTC 11168
Keywords TIM BARREL, AMINO-ACID BIOSYNTHESIS, CYTOPLASM, DIAMINOPIMEL BIOSYNTHESIS, LYASE, LYSINE BIOSYNTHESIS, SCHIFF BASE, STRU GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISE CSGID
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3LER     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DIHYDRODIPICOLINATE SYNTHASE  A 298 2225 70
2  Protein   DIHYDRODIPICOLINATE SYNTHASE  B 298 2225 70
3  Protein   DIHYDRODIPICOLINATE SYNTHASE  C 296 2217 62
4  Protein   DIHYDRODIPICOLINATE SYNTHASE  D 298 2225 70
5  Ligand   DIHYDRODIPICOLINATE SYNTHASE  A 1 0 4
6  Ligand   DIHYDRODIPICOLINATE SYNTHASE  B 3 0 11
7  Ligand   DIHYDRODIPICOLINATE SYNTHASE  C 1 0 4
8  Ligand   DIHYDRODIPICOLINATE SYNTHASE  D 1 0 4
9 Water     1100 0 1100
total       2296 8892 1395
Proteins
Unit 1 MSE1 ASP2 LYS3 ASN4 ILE5 ILE6 ILE7 GLY8 ALA9 MSE10 THR11 ALA12 LEU13 ILE14 THR15 PRO16 PHE17 LYS18 ASN19 GLY20 LYS21 VAL22 ASP23 GLU24 GLN25 SER26 TYR27 ALA28 ARG29 LEU30 ILE31 LYS32 ARG33 GLN34 ILE35 GLU36 ASN37 GLY38 ILE39 ASP40 ALA41 VAL42 VAL43 PRO44 VAL45 GLY46 THR47 THR48 GLY49 GLU50 SER51 ALA52 THR53 LEU54 THR55 HIS56 GLU57 GLU58 HIS59 ARG60 THR61 CYS62 ILE63 GLU64 ILE65 ALA66 VAL67 GLU68 THR69 CYS70 LYS71 GLY72 THR73 LYS74 VAL75 LYS76 VAL77 LEU78 ALA79 GLY80 ALA81 GLY82 SER83 ASN84 ALA85 THR86 HIS87 GLU88 ALA89 VAL90 GLY91 LEU92 ALA93 LYS94 PHE95 ALA96 LYS97 GLU98 HIS99 GLY100 ALA101 ASP102 GLY103 ILE104 LEU105 SER106 VAL107 ALA108 PRO109 TYR110 TYR111 ASN112 LYS113 PRO114 THR115 GLN116 GLN117 GLY118 LEU119 TYR120 GLU121 HIS122 TYR123 LYS124 ALA125 ILE126 ALA127 GLN128 SER129 VAL130 ASP131 ILE132 PRO133 VAL134 LEU135 LEU136 TYR137 ASN138 VAL139 PRO140 GLY141 ARG142 THR143 GLY144 CYS145 GLU146 ILE147 SER148 THR149 ASP150 THR151 ILE152 ILE153 LYS154 LEU155 PHE156 ARG157 ASP158 CYS159 GLU160 ASN161 ILE162 TYR163 GLY164 VAL165 KPI166 GLU167 ALA168 SER169 GLY170 ASN171 ILE172 ASP173 LYS174 CYS175 VAL176 ASP177 LEU178 LEU179 ALA180 HIS181 GLU182 PRO183 ARG184 MSE185 MSE186 LEU187 ILE188 SER189 GLY190 GLU191 ASP192 ALA193 ILE194 ASN195 TYR196 PRO197 ILE198 LEU199 SER200 ASN201 GLY202 GLY203 LYS204 GLY205 VAL206 ILE207 SER208 VAL209 THR210 SER211 ASN212 LEU213 LEU214 PRO215 ASP216 MSE217 ILE218 SER219 ALA220 LEU221 THR222 HIS223 PHE224 ALA225 LEU226 ASP227 GLU228 ASN229 TYR230 LYS231 GLU232 ALA233 LYS234 LYS235 ILE236 ASN237 ASP238 GLU239 LEU240 TYR241 ASN242 ILE243 ASN244 LYS245 ILE246 LEU247 PHE248 CYS249 GLU250 SER251 ASN252 PRO253 ILE254 PRO255 ILE256 LYS257 THR258 ALA259 MSE260 TYR261 LEU262 ALA263 GLY264 LEU265 ILE266 GLU267 SER268 LEU269 GLU270 PHE271 ARG272 LEU273 PRO274 LEU275 CYS276 SER277 PRO278 SER279 LYS280 GLU281 ASN282 PHE283 ALA284 LYS285 ILE286 GLU287 GLU288 VAL289 MSE290 LYS291 LYS292 TYR293 LYS294 ILE295 LYS296 GLY297 PHE298
Unit 2 MSE1 ASP2 LYS3 ASN4 ILE5 ILE6 ILE7 GLY8 ALA9 MSE10 THR11 ALA12 LEU13 ILE14 THR15 PRO16 PHE17 LYS18 ASN19 GLY20 LYS21 VAL22 ASP23 GLU24 GLN25 SER26 TYR27 ALA28 ARG29 LEU30 ILE31 LYS32 ARG33 GLN34 ILE35 GLU36 ASN37 GLY38 ILE39 ASP40 ALA41 VAL42 VAL43 PRO44 VAL45 GLY46 THR47 THR48 GLY49 GLU50 SER51 ALA52 THR53 LEU54 THR55 HIS56 GLU57 GLU58 HIS59 ARG60 THR61 CYS62 ILE63 GLU64 ILE65 ALA66 VAL67 GLU68 THR69 CYS70 LYS71 GLY72 THR73 LYS74 VAL75 LYS76 VAL77 LEU78 ALA79 GLY80 ALA81 GLY82 SER83 ASN84 ALA85 THR86 HIS87 GLU88 ALA89 VAL90 GLY91 LEU92 ALA93 LYS94 PHE95 ALA96 LYS97 GLU98 HIS99 GLY100 ALA101 ASP102 GLY103 ILE104 LEU105 SER106 VAL107 ALA108 PRO109 TYR110 TYR111 ASN112 LYS113 PRO114 THR115 GLN116 GLN117 GLY118 LEU119 TYR120 GLU121 HIS122 TYR123 LYS124 ALA125 ILE126 ALA127 GLN128 SER129 VAL130 ASP131 ILE132 PRO133 VAL134 LEU135 LEU136 TYR137 ASN138 VAL139 PRO140 GLY141 ARG142 THR143 GLY144 CYS145 GLU146 ILE147 SER148 THR149 ASP150 THR151 ILE152 ILE153 LYS154 LEU155 PHE156 ARG157 ASP158 CYS159 GLU160 ASN161 ILE162 TYR163 GLY164 VAL165 KPI166 GLU167 ALA168 SER169 GLY170 ASN171 ILE172 ASP173 LYS174 CYS175 VAL176 ASP177 LEU178 LEU179 ALA180 HIS181 GLU182 PRO183 ARG184 MSE185 MSE186 LEU187 ILE188 SER189 GLY190 GLU191 ASP192 ALA193 ILE194 ASN195 TYR196 PRO197 ILE198 LEU199 SER200 ASN201 GLY202 GLY203 LYS204 GLY205 VAL206 ILE207 SER208 VAL209 THR210 SER211 ASN212 LEU213 LEU214 PRO215 ASP216 MSE217 ILE218 SER219 ALA220 LEU221 THR222 HIS223 PHE224 ALA225 LEU226 ASP227 GLU228 ASN229 TYR230 LYS231 GLU232 ALA233 LYS234 LYS235 ILE236 ASN237 ASP238 GLU239 LEU240 TYR241 ASN242 ILE243 ASN244 LYS245 ILE246 LEU247 PHE248 CYS249 GLU250 SER251 ASN252 PRO253 ILE254 PRO255 ILE256 LYS257 THR258 ALA259 MSE260 TYR261 LEU262 ALA263 GLY264 LEU265 ILE266 GLU267 SER268 LEU269 GLU270 PHE271 ARG272 LEU273 PRO274 LEU275 CYS276 SER277 PRO278 SER279 LYS280 GLU281 ASN282 PHE283 ALA284 LYS285 ILE286 GLU287 GLU288 VAL289 MSE290 LYS291 LYS292 TYR293 LYS294 ILE295 LYS296 GLY297 PHE298
Unit 3 LYS3 ASN4 ILE5 ILE6 ILE7 GLY8 ALA9 MSE10 THR11 ALA12 LEU13 ILE14 THR15 PRO16 PHE17 LYS18 ASN19 GLY20 LYS21 VAL22 ASP23 GLU24 GLN25 SER26 TYR27 ALA28 ARG29 LEU30 ILE31 LYS32 ARG33 GLN34 ILE35 GLU36 ASN37 GLY38 ILE39 ASP40 ALA41 VAL42 VAL43 PRO44 VAL45 GLY46 THR47 THR48 GLY49 GLU50 SER51 ALA52 THR53 LEU54 THR55 HIS56 GLU57 GLU58 HIS59 ARG60 THR61 CYS62 ILE63 GLU64 ILE65 ALA66 VAL67 GLU68 THR69 CYS70 LYS71 GLY72 THR73 LYS74 VAL75 LYS76 VAL77 LEU78 ALA79 GLY80 ALA81 GLY82 SER83 ASN84 ALA85 THR86 HIS87 GLU88 ALA89 VAL90 GLY91 LEU92 ALA93 LYS94 PHE95 ALA96 LYS97 GLU98 HIS99 GLY100 ALA101 ASP102 GLY103 ILE104 LEU105 SER106 VAL107 ALA108 PRO109 TYR110 TYR111 ASN112 LYS113 PRO114 THR115 GLN116 GLN117 GLY118 LEU119 TYR120 GLU121 HIS122 TYR123 LYS124 ALA125 ILE126 ALA127 GLN128 SER129 VAL130 ASP131 ILE132 PRO133 VAL134 LEU135 LEU136 TYR137 ASN138 VAL139 PRO140 GLY141 ARG142 THR143 GLY144 CYS145 GLU146 ILE147 SER148 THR149 ASP150 THR151 ILE152 ILE153 LYS154 LEU155 PHE156 ARG157 ASP158 CYS159 GLU160 ASN161 ILE162 TYR163 GLY164 VAL165 KPI166 GLU167 ALA168 SER169 GLY170 ASN171 ILE172 ASP173 LYS174 CYS175 VAL176 ASP177 LEU178 LEU179 ALA180 HIS181 GLU182 PRO183 ARG184 MSE185 MSE186 LEU187 ILE188 SER189 GLY190 GLU191 ASP192 ALA193 ILE194 ASN195 TYR196 PRO197 ILE198 LEU199 SER200 ASN201 GLY202 GLY203 LYS204 GLY205 VAL206 ILE207 SER208 VAL209 THR210 SER211 ASN212 LEU213 LEU214 PRO215 ASP216 MSE217 ILE218 SER219 ALA220 LEU221 THR222 HIS223 PHE224 ALA225 LEU226 ASP227 GLU228 ASN229 TYR230 LYS231 GLU232 ALA233 LYS234 LYS235 ILE236 ASN237 ASP238 GLU239 LEU240 TYR241 ASN242 ILE243 ASN244 LYS245 ILE246 LEU247 PHE248 CYS249 GLU250 SER251 ASN252 PRO253 ILE254 PRO255 ILE256 LYS257 THR258 ALA259 MSE260 TYR261 LEU262 ALA263 GLY264 LEU265 ILE266 GLU267 SER268 LEU269 GLU270 PHE271 ARG272 LEU273 PRO274 LEU275 CYS276 SER277 PRO278 SER279 LYS280 GLU281 ASN282 PHE283 ALA284 LYS285 ILE286 GLU287 GLU288 VAL289 MSE290 LYS291 LYS292 TYR293 LYS294 ILE295 LYS296 GLY297 PHE298
Unit 4 MSE1 ASP2 LYS3 ASN4 ILE5 ILE6 ILE7 GLY8 ALA9 MSE10 THR11 ALA12 LEU13 ILE14 THR15 PRO16 PHE17 LYS18 ASN19 GLY20 LYS21 VAL22 ASP23 GLU24 GLN25 SER26 TYR27 ALA28 ARG29 LEU30 ILE31 LYS32 ARG33 GLN34 ILE35 GLU36 ASN37 GLY38 ILE39 ASP40 ALA41 VAL42 VAL43 PRO44 VAL45 GLY46 THR47 THR48 GLY49 GLU50 SER51 ALA52 THR53 LEU54 THR55 HIS56 GLU57 GLU58 HIS59 ARG60 THR61 CYS62 ILE63 GLU64 ILE65 ALA66 VAL67 GLU68 THR69 CYS70 LYS71 GLY72 THR73 LYS74 VAL75 LYS76 VAL77 LEU78 ALA79 GLY80 ALA81 GLY82 SER83 ASN84 ALA85 THR86 HIS87 GLU88 ALA89 VAL90 GLY91 LEU92 ALA93 LYS94 PHE95 ALA96 LYS97 GLU98 HIS99 GLY100 ALA101 ASP102 GLY103 ILE104 LEU105 SER106 VAL107 ALA108 PRO109 TYR110 TYR111 ASN112 LYS113 PRO114 THR115 GLN116 GLN117 GLY118 LEU119 TYR120 GLU121 HIS122 TYR123 LYS124 ALA125 ILE126 ALA127 GLN128 SER129 VAL130 ASP131 ILE132 PRO133 VAL134 LEU135 LEU136 TYR137 ASN138 VAL139 PRO140 GLY141 ARG142 THR143 GLY144 CYS145 GLU146 ILE147 SER148 THR149 ASP150 THR151 ILE152 ILE153 LYS154 LEU155 PHE156 ARG157 ASP158 CYS159 GLU160 ASN161 ILE162 TYR163 GLY164 VAL165 KPI166 GLU167 ALA168 SER169 GLY170 ASN171 ILE172 ASP173 LYS174 CYS175 VAL176 ASP177 LEU178 LEU179 ALA180 HIS181 GLU182 PRO183 ARG184 MSE185 MSE186 LEU187 ILE188 SER189 GLY190 GLU191 ASP192 ALA193 ILE194 ASN195 TYR196 PRO197 ILE198 LEU199 SER200 ASN201 GLY202 GLY203 LYS204 GLY205 VAL206 ILE207 SER208 VAL209 THR210 SER211 ASN212 LEU213 LEU214 PRO215 ASP216 MSE217 ILE218 SER219 ALA220 LEU221 THR222 HIS223 PHE224 ALA225 LEU226 ASP227 GLU228 ASN229 TYR230 LYS231 GLU232 ALA233 LYS234 LYS235 ILE236 ASN237 ASP238 GLU239 LEU240 TYR241 ASN242 ILE243 ASN244 LYS245 ILE246 LEU247 PHE248 CYS249 GLU250 SER251 ASN252 PRO253 ILE254 PRO255 ILE256 LYS257 THR258 ALA259 MSE260 TYR261 LEU262 ALA263 GLY264 LEU265 ILE266 GLU267 SER268 LEU269 GLU270 PHE271 ARG272 LEU273 PRO274 LEU275 CYS276 SER277 PRO278 SER279 LYS280 GLU281 ASN282 PHE283 ALA284 LYS285 ILE286 GLU287 GLU288 VAL289 MSE290 LYS291 LYS292 TYR293 LYS294 ILE295 LYS296 GLY297 PHE298
Ligands
Unit 5 EDO301
Unit 6 MG301 FMT302 PEG303
Unit 7 EDO301
Unit 8 ACY301
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany