3LDZ - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HUMAN STAM1 VHS DOMAIN IN COMPLEX WITH
• Keywords: UBIQUITIN-BINDING, CYTOPLASM, UBL CONJUGATION, ENDOSOME, MEM PROTEIN TRANSPORT, SH3 DOMAIN, TRANSPORT
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3LDZ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	UBIQUITIN	F	73	583	0
2	Protein	SIGNAL TRANSDUCING ADAPTER MOLECULE 1	A	140	1091	0
3	Protein	SIGNAL TRANSDUCING ADAPTER MOLECULE 1	D	140	1091	0
4	Protein	SIGNAL TRANSDUCING ADAPTER MOLECULE 1	B	140	1091	0
5	Protein	SIGNAL TRANSDUCING ADAPTER MOLECULE 1	C	140	1091	0
6	Protein	UBIQUITIN	E	73	582	0
7	Protein	UBIQUITIN	G	73	583	0
total				779	6112	0

Proteins

Unit 1	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73
Unit 2	PHE 4 ALA 5 THR 6 ASN 7 PRO 8 PHE 9 ASP 10 GLN 11 ASP 12 VAL 13 GLU 14 LYS 15 ALA 16 THR 17 SER 18 GLU 19 MET 20 ASN 21 THR 22 ALA 23 GLU 24 ASP 25 TRP 26 GLY 27 LEU 28 ILE 29 LEU 30 ASP 31 ILE 32 CYS 33 ASP 34 LYS 35 VAL 36 GLY 37 GLN 38 SER 39 ARG 40 THR 41 GLY 42 PRO 43 LYS 44 ASP 45 CYS 46 LEU 47 ARG 48 SER 49 ILE 50 MET 51 ARG 52 ARG 53 VAL 54 ASN 55 HIS 56 LYS 57 ASP 58 PRO 59 HIS 60 VAL 61 ALA 62 MET 63 GLN 64 ALA 65 LEU 66 THR 67 LEU 68 LEU 69 GLY 70 ALA 71 CYS 72 VAL 73 SER 74 ASN 75 CYS 76 GLY 77 LYS 78 ILE 79 PHE 80 HIS 81 LEU 82 GLU 83 VAL 84 CYS 85 SER 86 ARG 87 ASP 88 PHE 89 ALA 90 SER 91 GLU 92 VAL 93 SER 94 ASN 95 VAL 96 LEU 97 ASN 98 LYS 99 GLY 100 HIS 101 PRO 102 LYS 103 VAL 104 CYS 105 GLU 106 LYS 107 LEU 108 LYS 109 ALA 110 LEU 111 MET 112 VAL 113 GLU 114 TRP 115 THR 116 ASP 117 GLU 118 PHE 119 LYS 120 ASN 121 ASP 122 PRO 123 GLN 124 LEU 125 SER 126 LEU 127 ILE 128 SER 129 ALA 130 MET 131 ILE 132 LYS 133 ASN 134 LEU 135 LYS 136 GLU 137 GLN 138 GLY 139 VAL 140 THR 141 PHE 142 PRO 143
Unit 3	PHE 4 ALA 5 THR 6 ASN 7 PRO 8 PHE 9 ASP 10 GLN 11 ASP 12 VAL 13 GLU 14 LYS 15 ALA 16 THR 17 SER 18 GLU 19 MET 20 ASN 21 THR 22 ALA 23 GLU 24 ASP 25 TRP 26 GLY 27 LEU 28 ILE 29 LEU 30 ASP 31 ILE 32 CYS 33 ASP 34 LYS 35 VAL 36 GLY 37 GLN 38 SER 39 ARG 40 THR 41 GLY 42 PRO 43 LYS 44 ASP 45 CYS 46 LEU 47 ARG 48 SER 49 ILE 50 MET 51 ARG 52 ARG 53 VAL 54 ASN 55 HIS 56 LYS 57 ASP 58 PRO 59 HIS 60 VAL 61 ALA 62 MET 63 GLN 64 ALA 65 LEU 66 THR 67 LEU 68 LEU 69 GLY 70 ALA 71 CYS 72 VAL 73 SER 74 ASN 75 CYS 76 GLY 77 LYS 78 ILE 79 PHE 80 HIS 81 LEU 82 GLU 83 VAL 84 CYS 85 SER 86 ARG 87 ASP 88 PHE 89 ALA 90 SER 91 GLU 92 VAL 93 SER 94 ASN 95 VAL 96 LEU 97 ASN 98 LYS 99 GLY 100 HIS 101 PRO 102 LYS 103 VAL 104 CYS 105 GLU 106 LYS 107 LEU 108 LYS 109 ALA 110 LEU 111 MET 112 VAL 113 GLU 114 TRP 115 THR 116 ASP 117 GLU 118 PHE 119 LYS 120 ASN 121 ASP 122 PRO 123 GLN 124 LEU 125 SER 126 LEU 127 ILE 128 SER 129 ALA 130 MET 131 ILE 132 LYS 133 ASN 134 LEU 135 LYS 136 GLU 137 GLN 138 GLY 139 VAL 140 THR 141 PHE 142 PRO 143
Unit 4	PHE 4 ALA 5 THR 6 ASN 7 PRO 8 PHE 9 ASP 10 GLN 11 ASP 12 VAL 13 GLU 14 LYS 15 ALA 16 THR 17 SER 18 GLU 19 MET 20 ASN 21 THR 22 ALA 23 GLU 24 ASP 25 TRP 26 GLY 27 LEU 28 ILE 29 LEU 30 ASP 31 ILE 32 CYS 33 ASP 34 LYS 35 VAL 36 GLY 37 GLN 38 SER 39 ARG 40 THR 41 GLY 42 PRO 43 LYS 44 ASP 45 CYS 46 LEU 47 ARG 48 SER 49 ILE 50 MET 51 ARG 52 ARG 53 VAL 54 ASN 55 HIS 56 LYS 57 ASP 58 PRO 59 HIS 60 VAL 61 ALA 62 MET 63 GLN 64 ALA 65 LEU 66 THR 67 LEU 68 LEU 69 GLY 70 ALA 71 CYS 72 VAL 73 SER 74 ASN 75 CYS 76 GLY 77 LYS 78 ILE 79 PHE 80 HIS 81 LEU 82 GLU 83 VAL 84 CYS 85 SER 86 ARG 87 ASP 88 PHE 89 ALA 90 SER 91 GLU 92 VAL 93 SER 94 ASN 95 VAL 96 LEU 97 ASN 98 LYS 99 GLY 100 HIS 101 PRO 102 LYS 103 VAL 104 CYS 105 GLU 106 LYS 107 LEU 108 LYS 109 ALA 110 LEU 111 MET 112 VAL 113 GLU 114 TRP 115 THR 116 ASP 117 GLU 118 PHE 119 LYS 120 ASN 121 ASP 122 PRO 123 GLN 124 LEU 125 SER 126 LEU 127 ILE 128 SER 129 ALA 130 MET 131 ILE 132 LYS 133 ASN 134 LEU 135 LYS 136 GLU 137 GLN 138 GLY 139 VAL 140 THR 141 PHE 142 PRO 143
Unit 5	PHE 4 ALA 5 THR 6 ASN 7 PRO 8 PHE 9 ASP 10 GLN 11 ASP 12 VAL 13 GLU 14 LYS 15 ALA 16 THR 17 SER 18 GLU 19 MET 20 ASN 21 THR 22 ALA 23 GLU 24 ASP 25 TRP 26 GLY 27 LEU 28 ILE 29 LEU 30 ASP 31 ILE 32 CYS 33 ASP 34 LYS 35 VAL 36 GLY 37 GLN 38 SER 39 ARG 40 THR 41 GLY 42 PRO 43 LYS 44 ASP 45 CYS 46 LEU 47 ARG 48 SER 49 ILE 50 MET 51 ARG 52 ARG 53 VAL 54 ASN 55 HIS 56 LYS 57 ASP 58 PRO 59 HIS 60 VAL 61 ALA 62 MET 63 GLN 64 ALA 65 LEU 66 THR 67 LEU 68 LEU 69 GLY 70 ALA 71 CYS 72 VAL 73 SER 74 ASN 75 CYS 76 GLY 77 LYS 78 ILE 79 PHE 80 HIS 81 LEU 82 GLU 83 VAL 84 CYS 85 SER 86 ARG 87 ASP 88 PHE 89 ALA 90 SER 91 GLU 92 VAL 93 SER 94 ASN 95 VAL 96 LEU 97 ASN 98 LYS 99 GLY 100 HIS 101 PRO 102 LYS 103 VAL 104 CYS 105 GLU 106 LYS 107 LEU 108 LYS 109 ALA 110 LEU 111 MET 112 VAL 113 GLU 114 TRP 115 THR 116 ASP 117 GLU 118 PHE 119 LYS 120 ASN 121 ASP 122 PRO 123 GLN 124 LEU 125 SER 126 LEU 127 ILE 128 SER 129 ALA 130 MET 131 ILE 132 LYS 133 ASN 134 LEU 135 LYS 136 GLU 137 GLN 138 GLY 139 VAL 140 THR 141 PHE 142 PRO 143
Unit 6	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73
Unit 7	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73