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Sequence, Chains, Asymmetric and Biological Units

Title REFINED CRYSTAL STRUCTURE OF LIPOAMIDE DEHYDROGENASE FROM AZOTOBACTER VINELANDII AT 2.2 ANGSTROMS RESOLUTION. A COMPARISON WITH THE STRUCTURE OF GLUTATHIONE REDUCTASE
Keywords OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3LAD     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DIHYDROLIPOAMIDE DEHYDROGENASE  A 472 3427 0
2  Protein   DIHYDROLIPOAMIDE DEHYDROGENASE  B 472 3427 0
3  Ligand   DIHYDROLIPOAMIDE DEHYDROGENASE  A 1 0 53
4  Ligand   DIHYDROLIPOAMIDE DEHYDROGENASE  B 1 0 53
5 Water     451 0 451
total       1397 6854 557

Proteins
Unit 1 SER1 GLN2 LYS3 PHE4 ASP5 VAL6 ILE7 VAL8 ILE9 GLY10 ALA11 GLY12 PRO13 GLY14 GLY15 TYR16 VAL17 ALA18 ALA19 ILE20 LYS21 SER22 ALA23 GLN24 LEU25 GLY26 LEU27 LYS28 THR29 ALA30 LEU31 ILE32 GLU33 LYS34 TYR35 LYS36 GLY37 LYS38 GLU39 GLY40 LYS41 THR42 ALA43 LEU44 GLY45 GLY46 THR47 CYS48 LEU49 ASN50 VAL51 GLY52 CYS53 ILE54 PRO55 SER56 LYS57 ALA58 LEU59 LEU60 ASP61 SER62 SER63 TYR64 LYS65 PHE66 HIS67 GLU68 ALA69 HIS70 GLU71 SER72 PHE73 LYS74 LEU75 HIS76 GLY77 ILE78 SER79 THR80 GLY81 GLU82 VAL83 ALA84 ILE85 ASP86 VAL87 PRO88 THR89 MET90 ILE91 ALA92 ARG93 LYS94 ASP95 GLN96 ILE97 VAL98 ARG99 ASN100 LEU101 THR102 GLY103 GLY104 VAL105 ALA106 SER107 LEU108 ILE109 LYS110 ALA111 ASN112 GLY113 VAL114 THR115 LEU116 PHE117 GLU118 GLY119 HIS120 GLY121 LYS122 LEU123 LEU124 ALA125 GLY126 LYS127 LYS128 VAL129 GLU130 VAL131 THR132 ALA133 ALA134 ASP135 GLY136 SER137 SER138 GLN139 VAL140 LEU141 ASP142 THR143 GLU144 ASN145 VAL146 ILE147 LEU148 ALA149 SER150 GLY151 SER152 LYS153 PRO154 VAL155 GLU156 ILE157 PRO158 PRO159 ALA160 PRO161 VAL162 ASP163 GLN164 ASP165 VAL166 ILE167 VAL168 ASP169 SER170 THR171 GLY172 ALA173 LEU174 ASP175 PHE176 GLN177 ASN178 VAL179 PRO180 GLY181 LYS182 LEU183 GLY184 VAL185 ILE186 GLY187 ALA188 GLY189 VAL190 ILE191 GLY192 LEU193 GLU194 LEU195 GLY196 SER197 VAL198 TRP199 ALA200 ARG201 LEU202 GLY203 ALA204 GLU205 VAL206 THR207 VAL208 LEU209 GLU210 ALA211 MET212 ASP213 LYS214 PHE215 LEU216 PRO217 ALA218 VAL219 ASP220 GLU221 GLN222 VAL223 ALA224 LYS225 GLU226 ALA227 GLN228 LYS229 ILE230 LEU231 THR232 LYS233 GLN234 GLY235 LEU236 LYS237 ILE238 LEU239 LEU240 GLY241 ALA242 ARG243 VAL244 THR245 GLY246 THR247 GLU248 VAL249 LYS250 ASN251 LYS252 GLN253 VAL254 THR255 VAL256 LYS257 PHE258 VAL259 ASP260 ALA261 GLU262 GLY263 GLU264 LYS265 SER266 GLN267 ALA268 PHE269 ASP270 LYS271 LEU272 ILE273 VAL274 ALA275 VAL276 GLY277 ARG278 ARG279 PRO280 VAL281 THR282 THR283 ASP284 LEU285 LEU286 ALA287 ALA288 ASP289 SER290 GLY291 VAL292 THR293 LEU294 ASP295 GLU296 ARG297 GLY298 PHE299 ILE300 TYR301 VAL302 ASP303 ASP304 TYR305 CYS306 ALA307 THR308 SER309 VAL310 PRO311 GLY312 VAL313 TYR314 ALA315 ILE316 GLY317 ASP318 VAL319 VAL320 ARG321 GLY322 ALA323 MET324 LEU325 ALA326 HIS327 LYS328 ALA329 SER330 GLU331 GLU332 GLY333 VAL334 VAL335 VAL336 ALA337 GLU338 ARG339 ILE340 ALA341 GLY342 HIS343 LYS344 ALA345 GLN346 MET347 ASN348 TYR349 ASP350 LEU351 ILE352 PRO353 ALA354 VAL355 ILE356 TYR357 THR358 HIS359 PRO360 GLU361 ILE362 ALA363 GLY364 VAL365 GLY366 LYS367 THR368 GLU369 GLN370 ALA371 LEU372 LYS373 ALA374 GLU375 GLY376 VAL377 ALA378 ILE379 ASN380 VAL381 GLY382 VAL383 PHE384 PRO385 PHE386 ALA387 ALA388 SER389 GLY390 ARG391 ALA392 MET393 ALA394 ALA395 ASN396 ASP397 THR398 ALA399 GLY400 PHE401 VAL402 LYS403 VAL404 ILE405 ALA406 ASP407 ALA408 LYS409 THR410 ASP411 ARG412 VAL413 LEU414 GLY415 VAL416 HIS417 VAL418 ILE419 GLY420 PRO421 SER422 ALA423 ALA424 GLU425 LEU426 VAL427 GLN428 GLN429 GLY430 ALA431 ILE432 ALA433 MET434 GLU435 PHE436 GLY437 THR438 SER439 ALA440 GLU441 ASP442 LEU443 GLY444 MET445 MET446 VAL447 PHE448 ALA449 HIS450 PRO451 ALA452 LEU453 SER454 GLU455 ALA456 LEU457 HIS458 GLU459 ALA460 ALA461 LEU462 ALA463 VAL464 SER465 GLY466 HIS467 ALA468 ILE469 HIS470 VAL471 ALA472
Unit 2 SER1 GLN2 LYS3 PHE4 ASP5 VAL6 ILE7 VAL8 ILE9 GLY10 ALA11 GLY12 PRO13 GLY14 GLY15 TYR16 VAL17 ALA18 ALA19 ILE20 LYS21 SER22 ALA23 GLN24 LEU25 GLY26 LEU27 LYS28 THR29 ALA30 LEU31 ILE32 GLU33 LYS34 TYR35 LYS36 GLY37 LYS38 GLU39 GLY40 LYS41 THR42 ALA43 LEU44 GLY45 GLY46 THR47 CYS48 LEU49 ASN50 VAL51 GLY52 CYS53 ILE54 PRO55 SER56 LYS57 ALA58 LEU59 LEU60 ASP61 SER62 SER63 TYR64 LYS65 PHE66 HIS67 GLU68 ALA69 HIS70 GLU71 SER72 PHE73 LYS74 LEU75 HIS76 GLY77 ILE78 SER79 THR80 GLY81 GLU82 VAL83 ALA84 ILE85 ASP86 VAL87 PRO88 THR89 MET90 ILE91 ALA92 ARG93 LYS94 ASP95 GLN96 ILE97 VAL98 ARG99 ASN100 LEU101 THR102 GLY103 GLY104 VAL105 ALA106 SER107 LEU108 ILE109 LYS110 ALA111 ASN112 GLY113 VAL114 THR115 LEU116 PHE117 GLU118 GLY119 HIS120 GLY121 LYS122 LEU123 LEU124 ALA125 GLY126 LYS127 LYS128 VAL129 GLU130 VAL131 THR132 ALA133 ALA134 ASP135 GLY136 SER137 SER138 GLN139 VAL140 LEU141 ASP142 THR143 GLU144 ASN145 VAL146 ILE147 LEU148 ALA149 SER150 GLY151 SER152 LYS153 PRO154 VAL155 GLU156 ILE157 PRO158 PRO159 ALA160 PRO161 VAL162 ASP163 GLN164 ASP165 VAL166 ILE167 VAL168 ASP169 SER170 THR171 GLY172 ALA173 LEU174 ASP175 PHE176 GLN177 ASN178 VAL179 PRO180 GLY181 LYS182 LEU183 GLY184 VAL185 ILE186 GLY187 ALA188 GLY189 VAL190 ILE191 GLY192 LEU193 GLU194 LEU195 GLY196 SER197 VAL198 TRP199 ALA200 ARG201 LEU202 GLY203 ALA204 GLU205 VAL206 THR207 VAL208 LEU209 GLU210 ALA211 MET212 ASP213 LYS214 PHE215 LEU216 PRO217 ALA218 VAL219 ASP220 GLU221 GLN222 VAL223 ALA224 LYS225 GLU226 ALA227 GLN228 LYS229 ILE230 LEU231 THR232 LYS233 GLN234 GLY235 LEU236 LYS237 ILE238 LEU239 LEU240 GLY241 ALA242 ARG243 VAL244 THR245 GLY246 THR247 GLU248 VAL249 LYS250 ASN251 LYS252 GLN253 VAL254 THR255 VAL256 LYS257 PHE258 VAL259 ASP260 ALA261 GLU262 GLY263 GLU264 LYS265 SER266 GLN267 ALA268 PHE269 ASP270 LYS271 LEU272 ILE273 VAL274 ALA275 VAL276 GLY277 ARG278 ARG279 PRO280 VAL281 THR282 THR283 ASP284 LEU285 LEU286 ALA287 ALA288 ASP289 SER290 GLY291 VAL292 THR293 LEU294 ASP295 GLU296 ARG297 GLY298 PHE299 ILE300 TYR301 VAL302 ASP303 ASP304 TYR305 CYS306 ALA307 THR308 SER309 VAL310 PRO311 GLY312 VAL313 TYR314 ALA315 ILE316 GLY317 ASP318 VAL319 VAL320 ARG321 GLY322 ALA323 MET324 LEU325 ALA326 HIS327 LYS328 ALA329 SER330 GLU331 GLU332 GLY333 VAL334 VAL335 VAL336 ALA337 GLU338 ARG339 ILE340 ALA341 GLY342 HIS343 LYS344 ALA345 GLN346 MET347 ASN348 TYR349 ASP350 LEU351 ILE352 PRO353 ALA354 VAL355 ILE356 TYR357 THR358 HIS359 PRO360 GLU361 ILE362 ALA363 GLY364 VAL365 GLY366 LYS367 THR368 GLU369 GLN370 ALA371 LEU372 LYS373 ALA374 GLU375 GLY376 VAL377 ALA378 ILE379 ASN380 VAL381 GLY382 VAL383 PHE384 PRO385 PHE386 ALA387 ALA388 SER389 GLY390 ARG391 ALA392 MET393 ALA394 ALA395 ASN396 ASP397 THR398 ALA399 GLY400 PHE401 VAL402 LYS403 VAL404 ILE405 ALA406 ASP407 ALA408 LYS409 THR410 ASP411 ARG412 VAL413 LEU414 GLY415 VAL416 HIS417 VAL418 ILE419 GLY420 PRO421 SER422 ALA423 ALA424 GLU425 LEU426 VAL427 GLN428 GLN429 GLY430 ALA431 ILE432 ALA433 MET434 GLU435 PHE436 GLY437 THR438 SER439 ALA440 GLU441 ASP442 LEU443 GLY444 MET445 MET446 VAL447 PHE448 ALA449 HIS450 PRO451 ALA452 LEU453 SER454 GLU455 ALA456 LEU457 HIS458 GLU459 ALA460 ALA461 LEU462 ALA463 VAL464 SER465 GLY466 HIS467 ALA468 ILE469 HIS470 VAL471 ALA472

Ligands
Unit 3 FAD480
Unit 4 FAD480

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany