3L24 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE NERVE AGENT DEGRADING ORGANOPHOSPHATE ANHYDROLASE/PROLIDASE IN COMPLEX WITH INHIBITORS
• Keywords: PITA-BREAD, DETOXIFICATION, DIPEPTIDASE, HYDROLASE, MANGANESE, METAL-BINDING, METALLOPROTEASE, PROTEASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3L24	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	XAA-PRO DIPEPTIDASE	A	425	3443	0
2	Protein	XAA-PRO DIPEPTIDASE	B	417	3392	0
3	Protein	XAA-PRO DIPEPTIDASE	C	417	3392	0
4	Ligand	XAA-PRO DIPEPTIDASE	A	4	0	8
5	Ligand	XAA-PRO DIPEPTIDASE	B	5	0	9
6	Ligand	XAA-PRO DIPEPTIDASE	C	4	0	8
7	Water			431	0	431
total				1703	10227	456

Proteins

Unit 1	MET 1 ASN 2 LYS 3 LEU 4 ALA 5 VAL 6 LEU 7 TYR 8 ALA 9 GLU 10 HIS 11 ILE 12 ALA 13 THR 14 LEU 15 GLN 16 LYS 17 ARG 18 THR 19 ARG 20 GLU 21 ILE 22 ILE 23 GLU 24 ARG 25 GLU 26 ASN 27 LEU 28 ASP 29 GLY 30 VAL 31 VAL 32 PHE 33 HIS 34 SER 35 GLY 36 GLN 37 ALA 38 LYS 39 ARG 40 GLN 41 PHE 42 LEU 43 ASP 44 ASP 45 MET 46 TYR 47 TYR 48 PRO 49 PHE 50 LYS 51 VAL 52 ASN 53 PRO 54 GLN 55 PHE 56 LYS 57 ALA 58 TRP 59 LEU 60 PRO 61 VAL 62 ILE 63 ASP 64 ASN 65 PRO 66 HIS 67 CYS 68 TRP 69 ILE 70 VAL 71 ALA 72 ASN 73 GLY 74 THR 75 ASP 76 LYS 77 PRO 78 LYS 79 LEU 80 ILE 81 PHE 82 TYR 83 ARG 84 PRO 85 VAL 86 ASP 87 PHE 88 TRP 89 HIS 90 LYS 91 VAL 92 PRO 93 ASP 94 GLU 95 PRO 96 ASN 97 GLU 98 TYR 99 TRP 100 ALA 101 ASP 102 TYR 103 PHE 104 ASP 105 ILE 106 GLU 107 LEU 108 LEU 109 VAL 110 LYS 111 PRO 112 ASP 113 GLN 114 VAL 115 GLU 116 LYS 117 LEU 118 LEU 119 PRO 120 TYR 121 ASP 122 LYS 123 ALA 124 ARG 125 PHE 126 ALA 127 TYR 128 ILE 129 GLY 130 GLU 131 TYR 132 LEU 133 GLU 134 VAL 135 ALA 136 GLN 137 ALA 138 LEU 139 GLY 140 PHE 141 GLU 142 LEU 143 MET 144 ASN 145 PRO 146 GLU 147 PRO 148 VAL 149 MET 150 ASN 151 PHE 152 TYR 153 HIS 154 TYR 155 HIS 156 ARG 157 ALA 158 TYR 159 LYS 160 THR 161 GLN 162 TYR 163 GLU 164 LEU 165 ALA 166 CYS 167 MET 168 ARG 169 GLU 170 ALA 171 ASN 172 LYS 173 ILE 174 ALA 175 VAL 176 GLN 177 GLY 178 HIS 179 LYS 180 ALA 181 ALA 182 ARG 183 ASP 184 ALA 185 PHE 186 PHE 187 GLN 188 GLY 189 LYS 190 SER 191 GLU 192 PHE 193 GLU 194 ILE 195 GLN 196 GLN 197 ALA 198 TYR 199 LEU 200 LEU 201 ALA 202 THR 203 GLN 204 HIS 205 SER 206 GLU 207 ASN 208 ASP 209 ASN 210 PRO 211 TYR 212 GLY 213 ASN 214 ILE 215 VAL 216 ALA 217 LEU 218 ASN 219 GLU 220 ASN 221 CYS 222 ALA 223 ILE 224 LEU 225 HIS 226 TYR 227 THR 228 HIS 229 PHE 230 ASP 231 ARG 232 VAL 233 ALA 234 PRO 235 ALA 236 THR 237 HIS 238 ARG 239 SER 240 PHE 241 LEU 242 ILE 243 ASP 244 ALA 245 GLY 246 ALA 247 ASN 248 PHE 249 ASN 250 GLY 251 TYR 252 ALA 253 ALA 254 ASP 255 ILE 256 THR 257 ARG 258 THR 259 TYR 260 ASP 261 PHE 262 THR 263 GLY 264 GLU 265 GLY 266 GLU 267 PHE 268 ALA 269 GLU 270 LEU 271 VAL 272 ALA 273 THR 274 MET 275 LYS 276 GLN 277 HIS 278 GLN 279 ILE 280 ALA 281 LEU 282 MET 283 ASN 284 GLN 285 LEU 286 ALA 287 PRO 288 GLY 289 LYS 290 LEU 291 TYR 292 GLY 293 GLU 294 LEU 295 HIS 296 LEU 297 ASP 298 CYS 299 HIS 300 GLN 301 ARG 302 VAL 303 ALA 304 GLN 305 THR 306 LEU 307 SER 308 ASP 309 PHE 310 ASN 311 ILE 312 VAL 313 ASP 314 LEU 315 SER 316 ALA 317 ASP 318 GLU 319 ILE 320 VAL 321 ALA 322 LYS 323 GLY 324 ILE 325 THR 326 SER 327 THR 328 PHE 329 PHE 330 PRO 331 HIS 332 GLY 333 LEU 334 GLY 335 HIS 336 HIS 337 ILE 338 GLY 339 LEU 340 GLN 341 VAL 342 HIS 343 ASP 344 VAL 345 GLY 346 GLY 347 PHE 348 MET 349 ALA 350 LEU 366 ARG 367 CYS 368 THR 369 ARG 370 LYS 371 ILE 372 GLU 373 ALA 374 ASN 375 GLN 376 VAL 377 PHE 378 THR 379 ILE 380 GLU 381 PRO 382 GLY 383 LEU 384 TYR 385 PHE 386 ILE 387 ASP 388 SER 389 LEU 390 LEU 391 GLY 392 ASP 393 LEU 394 ALA 395 ALA 396 THR 397 ASP 398 ASN 399 ASN 400 GLN 401 HIS 402 ILE 403 ASN 404 TRP 405 ASP 406 LYS 407 VAL 408 ALA 409 GLU 410 LEU 411 LYS 412 PRO 413 PHE 414 GLY 415 GLY 416 ILE 417 ARG 418 ILE 419 GLU 420 ASP 421 ASN 422 ILE 423 ILE 424 VAL 425 HIS 426 GLU 427 ASP 428 SER 429 LEU 430 GLU 431 ASN 432 MET 433 THR 434 ARG 435 GLU 436 LEU 437 ARG 438 LEU 439 ARG 440
Unit 2	MET 1 ASN 2 LYS 3 LEU 4 ALA 5 VAL 6 LEU 7 TYR 8 ALA 9 GLU 10 HIS 11 ILE 12 ALA 13 THR 14 LEU 15 GLN 16 LYS 17 ARG 18 THR 19 ARG 20 GLU 21 ILE 22 ILE 23 GLU 24 ARG 25 GLU 26 ASN 27 LEU 28 ASP 29 GLY 30 VAL 31 VAL 32 PHE 33 HIS 34 SER 35 GLY 36 GLN 37 ALA 38 LYS 39 ARG 40 GLN 41 PHE 42 LEU 43 ASP 44 ASP 45 MET 46 TYR 47 TYR 48 PRO 49 PHE 50 LYS 51 VAL 52 ASN 53 PRO 54 GLN 55 PHE 56 LYS 57 ALA 58 TRP 59 LEU 60 PRO 61 VAL 62 ILE 63 ASP 64 ASN 65 PRO 66 HIS 67 CYS 68 TRP 69 ILE 70 VAL 71 ALA 72 ASN 73 GLY 74 THR 75 ASP 76 LYS 77 PRO 78 LYS 79 LEU 80 ILE 81 PHE 82 TYR 83 ARG 84 PRO 85 VAL 86 ASP 87 PHE 88 TRP 89 HIS 90 LYS 91 VAL 92 PRO 93 ASP 94 GLU 95 PRO 96 ASN 97 GLU 98 TYR 99 TRP 100 ALA 101 ASP 102 TYR 103 PHE 104 ASP 105 ILE 106 GLU 107 LEU 108 LEU 109 VAL 110 LYS 111 PRO 112 ASP 113 GLN 114 VAL 115 GLU 116 LYS 117 LEU 118 LEU 119 PRO 120 TYR 121 ASP 122 LYS 123 ALA 124 ARG 125 PHE 126 ALA 127 TYR 128 ILE 129 GLY 130 GLU 131 TYR 132 LEU 133 GLU 134 VAL 135 ALA 136 GLN 137 ALA 138 LEU 139 GLY 140 PHE 141 GLU 142 LEU 143 MET 144 ASN 145 PRO 146 GLU 147 PRO 148 VAL 149 MET 150 ASN 151 PHE 152 TYR 153 HIS 154 TYR 155 HIS 156 ARG 157 ALA 158 TYR 159 LYS 160 THR 161 GLN 162 TYR 163 GLU 164 LEU 165 ALA 166 CYS 167 MET 168 ARG 169 GLU 170 ALA 171 ASN 172 LYS 173 ILE 174 ALA 175 VAL 176 GLN 177 GLY 178 HIS 179 LYS 180 ALA 181 ALA 182 ARG 183 ASP 184 ALA 185 PHE 186 PHE 187 GLN 188 GLY 189 LYS 190 SER 191 GLU 192 PHE 193 GLU 194 ILE 195 GLN 196 GLN 197 ALA 198 TYR 199 LEU 200 LEU 201 ALA 202 THR 203 GLN 204 HIS 205 SER 206 GLU 207 ASN 208 ASP 209 ASN 210 PRO 211 TYR 212 GLY 213 ASN 214 ILE 215 VAL 216 ALA 217 LEU 218 ASN 219 GLU 220 ASN 221 CYS 222 ALA 223 ILE 224 LEU 225 HIS 226 TYR 227 THR 228 HIS 229 PHE 230 ASP 231 ARG 232 VAL 233 ALA 234 PRO 235 ALA 236 THR 237 HIS 238 ARG 239 SER 240 PHE 241 LEU 242 ILE 243 ASP 244 ALA 245 GLY 246 ALA 247 ASN 248 PHE 249 ASN 250 GLY 251 TYR 252 ALA 253 ALA 254 ASP 255 ILE 256 THR 257 ARG 258 THR 259 TYR 260 ASP 261 PHE 262 THR 263 GLY 264 GLU 265 GLY 266 GLU 267 PHE 268 ALA 269 GLU 270 LEU 271 VAL 272 ALA 273 THR 274 MET 275 LYS 276 GLN 277 HIS 278 GLN 279 ILE 280 ALA 281 LEU 282 MET 283 ASN 284 GLN 285 LEU 286 ALA 287 PRO 288 GLY 289 LYS 290 LEU 291 TYR 292 GLY 293 GLU 294 LEU 295 HIS 296 LEU 297 ASP 298 CYS 299 HIS 300 GLN 301 ARG 302 VAL 303 ALA 304 GLN 305 THR 306 LEU 307 SER 308 ASP 309 PHE 310 ASN 311 ILE 312 VAL 313 ASP 314 LEU 315 SER 316 ALA 317 ASP 318 GLU 319 ILE 320 VAL 321 ALA 322 LYS 323 GLY 324 ILE 325 THR 326 SER 327 THR 328 PHE 329 PHE 330 PRO 331 HIS 332 GLY 333 LEU 334 GLY 335 HIS 336 HIS 337 ILE 338 GLY 339 LEU 340 GLN 341 VAL 342 HIS 343 ASP 344 VAL 345 THR 369 ARG 370 LYS 371 ILE 372 GLU 373 ALA 374 ASN 375 GLN 376 VAL 377 PHE 378 THR 379 ILE 380 GLU 381 PRO 382 GLY 383 LEU 384 TYR 385 PHE 386 ILE 387 ASP 388 SER 389 LEU 390 LEU 391 GLY 392 ASP 393 LEU 394 ALA 395 ALA 396 THR 397 ASP 398 ASN 399 ASN 400 GLN 401 HIS 402 ILE 403 ASN 404 TRP 405 ASP 406 LYS 407 VAL 408 ALA 409 GLU 410 LEU 411 LYS 412 PRO 413 PHE 414 GLY 415 GLY 416 ILE 417 ARG 418 ILE 419 GLU 420 ASP 421 ASN 422 ILE 423 ILE 424 VAL 425 HIS 426 GLU 427 ASP 428 SER 429 LEU 430 GLU 431 ASN 432 MET 433 THR 434 ARG 435 GLU 436 LEU 437 ARG 438 LEU 439 ARG 440
Unit 3	MET 1 ASN 2 LYS 3 LEU 4 ALA 5 VAL 6 LEU 7 TYR 8 ALA 9 GLU 10 HIS 11 ILE 12 ALA 13 THR 14 LEU 15 GLN 16 LYS 17 ARG 18 THR 19 ARG 20 GLU 21 ILE 22 ILE 23 GLU 24 ARG 25 GLU 26 ASN 27 LEU 28 ASP 29 GLY 30 VAL 31 VAL 32 PHE 33 HIS 34 SER 35 GLY 36 GLN 37 ALA 38 LYS 39 ARG 40 GLN 41 PHE 42 LEU 43 ASP 44 ASP 45 MET 46 TYR 47 TYR 48 PRO 49 PHE 50 LYS 51 VAL 52 ASN 53 PRO 54 GLN 55 PHE 56 LYS 57 ALA 58 TRP 59 LEU 60 PRO 61 VAL 62 ILE 63 ASP 64 ASN 65 PRO 66 HIS 67 CYS 68 TRP 69 ILE 70 VAL 71 ALA 72 ASN 73 GLY 74 THR 75 ASP 76 LYS 77 PRO 78 LYS 79 LEU 80 ILE 81 PHE 82 TYR 83 ARG 84 PRO 85 VAL 86 ASP 87 PHE 88 TRP 89 HIS 90 LYS 91 VAL 92 PRO 93 ASP 94 GLU 95 PRO 96 ASN 97 GLU 98 TYR 99 TRP 100 ALA 101 ASP 102 TYR 103 PHE 104 ASP 105 ILE 106 GLU 107 LEU 108 LEU 109 VAL 110 LYS 111 PRO 112 ASP 113 GLN 114 VAL 115 GLU 116 LYS 117 LEU 118 LEU 119 PRO 120 TYR 121 ASP 122 LYS 123 ALA 124 ARG 125 PHE 126 ALA 127 TYR 128 ILE 129 GLY 130 GLU 131 TYR 132 LEU 133 GLU 134 VAL 135 ALA 136 GLN 137 ALA 138 LEU 139 GLY 140 PHE 141 GLU 142 LEU 143 MET 144 ASN 145 PRO 146 GLU 147 PRO 148 VAL 149 MET 150 ASN 151 PHE 152 TYR 153 HIS 154 TYR 155 HIS 156 ARG 157 ALA 158 TYR 159 LYS 160 THR 161 GLN 162 TYR 163 GLU 164 LEU 165 ALA 166 CYS 167 MET 168 ARG 169 GLU 170 ALA 171 ASN 172 LYS 173 ILE 174 ALA 175 VAL 176 GLN 177 GLY 178 HIS 179 LYS 180 ALA 181 ALA 182 ARG 183 ASP 184 ALA 185 PHE 186 PHE 187 GLN 188 GLY 189 LYS 190 SER 191 GLU 192 PHE 193 GLU 194 ILE 195 GLN 196 GLN 197 ALA 198 TYR 199 LEU 200 LEU 201 ALA 202 THR 203 GLN 204 HIS 205 SER 206 GLU 207 ASN 208 ASP 209 ASN 210 PRO 211 TYR 212 GLY 213 ASN 214 ILE 215 VAL 216 ALA 217 LEU 218 ASN 219 GLU 220 ASN 221 CYS 222 ALA 223 ILE 224 LEU 225 HIS 226 TYR 227 THR 228 HIS 229 PHE 230 ASP 231 ARG 232 VAL 233 ALA 234 PRO 235 ALA 236 THR 237 HIS 238 ARG 239 SER 240 PHE 241 LEU 242 ILE 243 ASP 244 ALA 245 GLY 246 ALA 247 ASN 248 PHE 249 ASN 250 GLY 251 TYR 252 ALA 253 ALA 254 ASP 255 ILE 256 THR 257 ARG 258 THR 259 TYR 260 ASP 261 PHE 262 THR 263 GLY 264 GLU 265 GLY 266 GLU 267 PHE 268 ALA 269 GLU 270 LEU 271 VAL 272 ALA 273 THR 274 MET 275 LYS 276 GLN 277 HIS 278 GLN 279 ILE 280 ALA 281 LEU 282 MET 283 ASN 284 GLN 285 LEU 286 ALA 287 PRO 288 GLY 289 LYS 290 LEU 291 TYR 292 GLY 293 GLU 294 LEU 295 HIS 296 LEU 297 ASP 298 CYS 299 HIS 300 GLN 301 ARG 302 VAL 303 ALA 304 GLN 305 THR 306 LEU 307 SER 308 ASP 309 PHE 310 ASN 311 ILE 312 VAL 313 ASP 314 LEU 315 SER 316 ALA 317 ASP 318 GLU 319 ILE 320 VAL 321 ALA 322 LYS 323 GLY 324 ILE 325 THR 326 SER 327 THR 328 PHE 329 PHE 330 PRO 331 HIS 332 GLY 333 LEU 334 GLY 335 HIS 336 HIS 337 ILE 338 GLY 339 LEU 340 GLN 341 VAL 342 HIS 343 ASP 344 VAL 345 THR 369 ARG 370 LYS 371 ILE 372 GLU 373 ALA 374 ASN 375 GLN 376 VAL 377 PHE 378 THR 379 ILE 380 GLU 381 PRO 382 GLY 383 LEU 384 TYR 385 PHE 386 ILE 387 ASP 388 SER 389 LEU 390 LEU 391 GLY 392 ASP 393 LEU 394 ALA 395 ALA 396 THR 397 ASP 398 ASN 399 ASN 400 GLN 401 HIS 402 ILE 403 ASN 404 TRP 405 ASP 406 LYS 407 VAL 408 ALA 409 GLU 410 LEU 411 LYS 412 PRO 413 PHE 414 GLY 415 GLY 416 ILE 417 ARG 418 ILE 419 GLU 420 ASP 421 ASN 422 ILE 423 ILE 424 VAL 425 HIS 426 GLU 427 ASP 428 SER 429 LEU 430 GLU 431 ASN 432 MET 433 THR 434 ARG 435 GLU 436 LEU 437 ARG 438 LEU 439 ARG 440

Ligands

Unit 4	MN 518 MN 519 MN 520 GOA 521
Unit 5	MN 518 MN 519 MN 520 MN 521 GOA 522
Unit 6	MN 518 MN 519 MN 520 GOA 521