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Sequence, Chains, Asymmetric and Biological Units

Title POU PROTEIN:DNA COMPLEX
Keywords POU, TRANSCRIPTION FACTOR DNA COMPLEX, PORE, STEM CELLS, EMB TRANSCRIPTION-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3L1P     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   POU DOMAIN, CLASS 5, TRANSCRIPTION FACTOR 1  A 147 1054 0
2  Protein   POU DOMAIN, CLASS 5, TRANSCRIPTION FACTOR 1  B 145 1072 0
3  Other macromolecule   DNA (5'- D(*TP*CP*CP*AP*CP*AP*TP*TP*TP*GP*AP*AP*AP*GP*GP*CP*AP*AP*AP A)-3')  N 23 472 0
4  Other macromolecule   DNA (5'- D(*AP*TP*CP*CP*AP*TP*TP*TP*GP*CP*CP*TP*TP*TP*CP*AP*AP*AP*TP G)-3')  M 23 465 0
total       338 3063 0

Proteins
Unit 1 ASP1 MET2 LYS3 ALA4 LEU5 GLN6 LYS7 GLU8 LEU9 GLU10 GLN11 PHE12 ALA13 LYS14 LEU15 LEU16 LYS17 GLN18 LYS19 ARG20 ILE21 THR22 LEU23 GLY24 TYR25 THR26 GLN27 ALA28 ASP29 VAL30 GLY31 LEU32 THR33 LEU34 GLY35 VAL36 LEU37 PHE38 GLY39 LYS40 VAL41 PHE42 SER43 GLN44 THR45 THR46 ILE47 SER48 ARG49 PHE50 GLU51 ALA52 LEU53 GLN54 LEU55 SER56 LEU57 LYS58 ASN59 MET60 SER61 LYS62 LEU63 ARG64 PRO65 LEU66 LEU67 GLU68 LYS69 TRP70 VAL71 GLU72 GLU73 ALA74 ASP75 ASN76 ASN77 GLU78 ASN79 LEU80 GLN81 GLU82 ILE83 SER84 LYS85 SER86 VAL90 GLN91 ALA92 ARG93 LYS94 ARG95 LYS96 ARG97 THR98 SER99 ILE100 GLU101 ASN102 ARG103 VAL104 ARG105 TRP106 SER107 LEU108 GLU109 THR110 MET111 PHE112 LEU113 LYS114 SER115 PRO116 LYS117 PRO118 SER119 LEU120 GLN121 GLN122 ILE123 THR124 HIS125 ILE126 ALA127 ASN128 GLN129 LEU130 GLY131 LEU132 GLU133 LYS134 ASP135 VAL136 VAL137 ARG138 VAL139 TRP140 PHE141 SER142 ASN143 ARG144 ARG145 GLN146 LYS147 GLY148 LYS149 ARG150
Unit 2 LYS3 ALA4 LEU5 GLN6 LYS7 GLU8 LEU9 GLU10 GLN11 PHE12 ALA13 LYS14 LEU15 LEU16 LYS17 GLN18 LYS19 ARG20 ILE21 THR22 LEU23 GLY24 TYR25 THR26 GLN27 ALA28 ASP29 VAL30 GLY31 LEU32 THR33 LEU34 GLY35 VAL36 LEU37 PHE38 GLY39 LYS40 VAL41 PHE42 SER43 GLN44 THR45 THR46 ILE47 SER48 ARG49 PHE50 GLU51 ALA52 LEU53 GLN54 LEU55 SER56 LEU57 LYS58 ASN59 MET60 SER61 LYS62 LEU63 ARG64 PRO65 LEU66 LEU67 GLU68 LYS69 TRP70 VAL71 GLU72 GLU73 ALA74 ASP75 ASN76 ASN77 GLU78 ASN79 LEU80 GLN81 GLU82 ILE83 SER84 LYS85 SER86 GLN91 ALA92 ARG93 LYS94 ARG95 LYS96 ARG97 THR98 SER99 ILE100 GLU101 ASN102 ARG103 VAL104 ARG105 TRP106 SER107 LEU108 GLU109 THR110 MET111 PHE112 LEU113 LYS114 SER115 PRO116 LYS117 PRO118 SER119 LEU120 GLN121 GLN122 ILE123 THR124 HIS125 ILE126 ALA127 ASN128 GLN129 LEU130 GLY131 LEU132 GLU133 LYS134 ASP135 VAL136 VAL137 ARG138 VAL139 TRP140 PHE141 SER142 ASN143 ARG144 ARG145 GLN146 LYS147 GLY148 LYS149 ARG150 SER151

Other macromolecules
Unit 3 DT1 DC2 DC3 DA4 DC5 DA6 DT7 DT8 DT9 DG10 DA11 DA12 DA13 DG14 DG15 DC16 DA17 DA18 DA19 DT20 DG21 DG22 DA23
Unit 4 DA1 DT2 DC3 DC4 DA5 DT6 DT7 DT8 DG9 DC10 DC11 DT12 DT13 DT14 DC15 DA16 DA17 DA18 DT19 DG20 DT21 DG22 DG23

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany