Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title COMPLEX STRUCTURE OF SIDM/DRRA WITH THE WILD TYPE RAB1
Keywords GEF-GDF-RAB COMPLEX, GTP-BINDING, GUANINE-NUCLEOTIDE EXCHANG GDI-DISPLACEMENT FACTOR, TYPE IV EFFECTOR PROTEIN FROM LEGI PROTEIN BINDING-PROTEIN TRANSPORT COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3L0I     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DRRA  A 316 2347 112
2  Protein   RAS-RELATED PROTEIN RAB-1A  B 162 1225 32
3  Protein   DRRA  C 322 2439 112
4  Protein   RAS-RELATED PROTEIN RAB-1A  D 174 1359 32
5  Ligand   DRRA  A 1 0 5
6  Ligand   RAS-RELATED PROTEIN RAB-1A  B 1 0 5
7  Ligand   DRRA  C 3 0 7
8  Ligand   RAS-RELATED PROTEIN RAB-1A  D 1 0 5
9 Water     24 0 24
total       1004 7370 334
Proteins
Unit 1 SER210 PHE211 SER212 ASN213 MSE214 VAL215 SER216 ALA217 LYS218 LYS219 PHE220 TYR221 ASN222 LYS223 ALA224 ILE225 PHE228 THR229 ALA230 PRO231 LYS232 ALA235 GLU236 VAL238 SER239 VAL240 LYS241 THR242 HIS243 ILE244 MSE245 ARG246 PRO247 ILE248 ASP249 PHE250 MSE251 LEU252 MSE253 GLY254 LEU255 ARG256 GLU257 GLU258 PHE259 ASN260 LEU261 TYR262 SER263 GLU264 ASP265 HIS268 LEU269 SER270 ALA271 PRO272 GLY273 THR274 ILE275 ARG276 LEU277 LEU278 ARG279 GLU280 LYS281 ASN282 LEU283 LEU284 PRO285 GLU286 GLU287 GLN288 ILE289 ALA290 ARG291 ILE292 GLU293 SER294 VAL295 TYR296 ASN297 GLN298 ALA299 MSE300 SER301 LYS302 ARG303 PHE304 GLU305 LEU306 HIS307 ALA308 GLU309 HIS310 GLU313 HIS314 ASP315 GLU316 MSE317 PRO318 TYR319 SER320 ASP321 ALA322 LYS323 ALA324 MSE325 LEU326 ASP327 GLU328 VAL329 ALA330 LYS331 ILE332 ARG333 GLU334 LEU335 GLY336 VAL337 GLN338 ARG339 VAL340 THR341 ARG342 ILE343 GLU344 ASN345 LEU346 GLU347 ASN348 ALA349 LYS350 LYS351 LEU352 TRP353 ASP354 ASN355 ALA356 ASN357 SER358 MSE359 LEU360 GLU361 LYS362 GLY363 ASN364 ILE365 SER366 GLY367 TYR368 LEU369 LYS370 ALA371 ALA372 ASN373 GLU374 LEU375 HIS376 LYS377 PHE378 MSE379 LYS380 GLU381 LYS382 ASN383 LEU384 LYS385 GLU386 ASP387 ASP388 LEU389 ARG390 PRO391 GLU392 LEU393 SER394 ASP395 LYS396 THR397 ILE398 SER399 PRO400 LYS401 GLY402 TYR403 ALA404 ILE405 LEU406 GLN407 SER408 LEU409 TRP410 GLY411 ALA412 ALA413 SER414 ASP415 TYR416 SER417 ARG418 ALA419 ALA420 ALA421 THR422 LEU423 THR424 GLU425 SER426 THR427 VAL428 GLU429 PRO430 GLY431 LEU432 VAL433 SER434 ALA435 VAL436 ASN437 LYS438 MSE439 SER440 ALA441 PHE442 PHE443 MSE444 ASP445 CYS446 LYS447 LEU448 SER449 PRO450 ASN451 GLU452 ARG453 ALA454 THR455 PRO456 ASP457 PRO458 ASP459 PHE460 LYS461 VAL462 GLY463 LYS464 SER465 LYS466 ILE467 LEU468 VAL469 GLY470 ILE471 MSE472 GLN473 PHE474 ILE475 LYS476 ASP477 VAL478 ALA479 ASP480 PRO481 THR482 SER483 LYS484 ILE485 TRP486 MSE487 HIS488 ASN489 THR490 LYS491 ALA492 LEU493 MSE494 ASN495 HIS496 LYS497 ILE498 ALA499 ALA500 ILE501 GLN502 LYS503 LEU504 GLU505 ARG506 SER507 ASN508 ASN509 VAL510 ASN511 ASP512 GLU513 THR514 LEU515 GLU516 SER517 VAL518 LEU519 SER520 SER521 LYS522 GLY523 GLU524 ASN525 LEU526 SER527 GLU528 TYR529 LEU530 SER531 TYR532 LYS533 TYR534
Unit 2 SER3 MSE4 PRO6 GLU7 TYR8 ASP9 TYR10 LEU11 PHE12 LYS13 LEU14 LEU15 LEU16 ILE17 GLY18 ASP19 SER20 GLY21 VAL22 GLY23 LYS24 SER25 CYS26 LEU27 LEU28 LEU29 ARG30 PHE31 ALA32 ASP33 ASP34 THR35 TYR36 THR37 GLU38 SER39 TYR40 ILE41 SER42 THR43 ILE44 GLY45 VAL46 ASP47 PHE48 LYS49 ILE50 ARG51 THR52 ILE53 GLU54 LEU55 ASP56 GLY57 LYS58 THR59 ILE60 LYS61 LEU62 GLN63 ILE64 TRP65 ASP66 THR67 ALA68 GLY69 GLN70 GLU71 ARG72 PHE73 ARG74 THR75 ILE76 THR77 SER78 SER79 ARG82 GLY83 ALA84 HIS85 GLY86 ILE87 ILE88 VAL89 VAL90 TYR91 VAL93 THR94 ASP95 GLN96 GLU97 SER98 PHE99 ASN100 ASN101 VAL102 LYS103 GLN104 TRP105 LEU106 GLN107 GLU108 ILE109 ASP110 ARG111 TYR112 ALA113 GLU115 ASN116 VAL117 ASN118 LYS119 LEU120 LEU121 VAL122 ASN124 LYS125 CYS126 ASP127 LEU128 THR129 LYS132 VAL133 VAL134 ASP135 TYR136 THR137 THR138 LYS140 GLU141 PHE142 ALA143 ASP144 SER145 LEU146 GLY147 ILE148 PRO149 PHE150 LEU151 GLU152 THR153 SER154 ALA158 THR159 ASN160 VAL161 GLU162 GLN163 SER164 PHE165 MSE166 THR167 MSE168 ALA169 ALA170 GLU171 ILE172 LYS173 LYS174 ARG175 MSE176
Unit 3 PRO209 SER210 PHE211 SER212 ASN213 MSE214 VAL215 SER216 ALA217 LYS218 LYS219 PHE220 TYR221 ASN222 LYS223 ALA224 ILE225 LYS226 ASP227 PHE228 THR229 ALA230 PRO231 LYS232 GLU233 GLY234 ALA235 GLU236 VAL237 VAL238 SER239 VAL240 LYS241 THR242 HIS243 ILE244 MSE245 ARG246 PRO247 ILE248 ASP249 PHE250 MSE251 LEU252 MSE253 GLY254 LEU255 ARG256 GLU257 GLU258 PHE259 ASN260 LEU261 TYR262 SER263 GLU264 ASP265 HIS268 LEU269 SER270 ALA271 PRO272 GLY273 THR274 ILE275 ARG276 LEU277 LEU278 ARG279 GLU280 LYS281 ASN282 LEU283 LEU284 PRO285 GLU286 GLU287 GLN288 ILE289 ALA290 ARG291 ILE292 GLU293 SER294 VAL295 TYR296 ASN297 GLN298 ALA299 MSE300 SER301 LYS302 ARG303 PHE304 GLU305 LEU306 HIS307 ALA308 GLU309 HIS310 LYS311 LYS312 GLU313 HIS314 ASP315 GLU316 MSE317 PRO318 TYR319 SER320 ASP321 ALA322 LYS323 ALA324 MSE325 LEU326 ASP327 GLU328 VAL329 ALA330 LYS331 ILE332 ARG333 GLU334 LEU335 GLY336 VAL337 GLN338 ARG339 VAL340 THR341 ARG342 ILE343 GLU344 ASN345 LEU346 GLU347 ASN348 ALA349 LYS350 LYS351 LEU352 TRP353 ASP354 ASN355 ALA356 ASN357 SER358 MSE359 LEU360 GLU361 LYS362 GLY363 ASN364 ILE365 SER366 GLY367 TYR368 LEU369 LYS370 ALA371 ALA372 ASN373 GLU374 LEU375 HIS376 LYS377 PHE378 MSE379 LYS380 GLU381 LYS382 ASN383 LEU384 LYS385 GLU386 ASP387 ASP388 LEU389 ARG390 PRO391 GLU392 LEU393 SER394 ASP395 LYS396 THR397 ILE398 SER399 PRO400 LYS401 GLY402 TYR403 ALA404 ILE405 LEU406 GLN407 SER408 LEU409 TRP410 GLY411 ALA412 ALA413 SER414 ASP415 TYR416 SER417 ARG418 ALA419 ALA420 ALA421 THR422 LEU423 THR424 GLU425 SER426 THR427 VAL428 GLU429 PRO430 GLY431 LEU432 VAL433 SER434 ALA435 VAL436 ASN437 LYS438 MSE439 SER440 ALA441 PHE442 PHE443 MSE444 ASP445 CYS446 LYS447 LEU448 SER449 PRO450 ASN451 GLU452 ARG453 ALA454 THR455 PRO456 ASP457 PRO458 ASP459 PHE460 LYS461 VAL462 GLY463 LYS464 SER465 LYS466 ILE467 LEU468 VAL469 GLY470 ILE471 MSE472 GLN473 PHE474 ILE475 LYS476 ASP477 VAL478 ALA479 ASP480 PRO481 THR482 SER483 LYS484 ILE485 TRP486 MSE487 HIS488 ASN489 THR490 LYS491 ALA492 LEU493 MSE494 ASN495 HIS496 LYS497 ILE498 ALA499 ALA500 ILE501 GLN502 LYS503 LEU504 GLU505 ARG506 SER507 ASN508 ASN509 VAL510 ASN511 ASP512 GLU513 THR514 LEU515 GLU516 SER517 VAL518 LEU519 SER520 SER521 LYS522 GLY523 GLU524 ASN525 LEU526 SER527 GLU528 TYR529 LEU530 SER531 TYR532
Unit 4 SER3 MSE4 ASN5 PRO6 GLU7 TYR8 ASP9 TYR10 LEU11 PHE12 LYS13 LEU14 LEU15 LEU16 ILE17 GLY18 ASP19 SER20 GLY21 VAL22 GLY23 LYS24 SER25 CYS26 LEU27 LEU28 LEU29 ARG30 PHE31 ALA32 ASP33 ASP34 THR35 TYR36 THR37 GLU38 SER39 TYR40 ILE41 SER42 THR43 ILE44 GLY45 VAL46 ASP47 PHE48 LYS49 ILE50 ARG51 THR52 ILE53 GLU54 LEU55 ASP56 GLY57 LYS58 THR59 ILE60 LYS61 LEU62 GLN63 ILE64 TRP65 ASP66 THR67 ALA68 GLY69 GLN70 GLU71 ARG72 PHE73 ARG74 THR75 ILE76 THR77 SER78 SER79 TYR80 TYR81 ARG82 GLY83 ALA84 HIS85 GLY86 ILE87 ILE88 VAL89 VAL90 TYR91 ASP92 VAL93 THR94 ASP95 GLN96 GLU97 SER98 PHE99 ASN100 ASN101 VAL102 LYS103 GLN104 TRP105 LEU106 GLN107 GLU108 ILE109 ASP110 ARG111 TYR112 ALA113 SER114 GLU115 ASN116 VAL117 ASN118 LYS119 LEU120 LEU121 VAL122 GLY123 ASN124 LYS125 CYS126 ASP127 LEU128 THR129 THR130 LYS131 LYS132 VAL133 VAL134 ASP135 TYR136 THR137 THR138 ALA139 LYS140 GLU141 PHE142 ALA143 ASP144 SER145 LEU146 GLY147 ILE148 PRO149 PHE150 LEU151 GLU152 THR153 SER154 ALA155 LYS156 ASN157 ALA158 THR159 ASN160 VAL161 GLU162 GLN163 SER164 PHE165 MSE166 THR167 MSE168 ALA169 ALA170 GLU171 ILE172 LYS173 LYS174 ARG175 MSE176
Ligands
Unit 5 SO43
Unit 6 SO4178
Unit 7 SO41 CL2 CL551
Unit 8 SO4178
Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany