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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE MASTER TRANSCRIPTIONAL REGULATOR, S VIBRIO VULNIFICUS PROVIDES INSIGHT INTO ITS DNA RECOGNITION
Keywords VIBRIO VULNIFICUS, SMCR, TRANSCRIPTIONAL REGULATOR, QUORUM S DNA-BINDING, TRANSCRIPTION REGULATION, TRANSCRIPTION REGULA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3KZ9     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SMCR  A 201 1608 32
2  Protein   SMCR  B 203 1606 40
3  Protein   SMCR  C 203 1622 32
4  Protein   SMCR  D 199 1588 32
5  Ligand   SMCR  A 1 0 5
6  Ligand   SMCR  B 1 0 5
7  Ligand   SMCR  C 2 0 10
8  Ligand   SMCR  D 2 0 10
9 Water     453 0 453
total       1265 6424 619

Proteins
Unit 1 ALA5 LYS6 ARG7 PRO8 ARG9 THR10 ARG11 LEU12 SER13 PRO14 LEU15 LYS16 ARG17 LYS18 GLN19 GLN20 LEU21 MSE22 GLU23 ILE24 ALA25 LEU26 GLU27 VAL28 PHE29 ALA30 ARG31 ARG32 GLY33 ILE34 GLY35 ARG36 GLY37 GLY38 HIS39 ALA40 ASP41 ILE42 ALA43 GLU44 ILE45 ALA46 GLN47 VAL48 SER49 VAL50 ALA51 THR52 VAL53 PHE54 ASN55 TYR56 PHE57 PRO58 THR59 ARG60 GLU61 ASP62 LEU63 VAL64 ASP65 GLU66 VAL67 LEU68 ASN69 HIS70 VAL71 VAL72 ARG73 GLN74 PHE75 SER76 ASN77 PHE78 LEU79 SER80 ASP81 ASN82 ILE83 ASP84 LEU85 ASP86 LEU87 HIS88 ALA89 LYS90 GLU91 ASN92 ILE93 ALA94 ASN95 ILE96 THR97 ASN98 ALA99 MSE100 ILE101 GLU102 LEU103 VAL104 VAL105 GLN106 ASP107 ASN108 HIS109 TRP110 LEU111 LYS112 VAL113 TRP114 PHE115 GLU116 TRP117 SER118 ALA119 SER120 THR121 ARG122 ASP123 GLU124 VAL125 TRP126 PRO127 LEU128 PHE129 VAL130 THR131 THR132 ASN133 ARG134 THR135 ASN136 GLN137 LEU138 LEU139 VAL140 GLN141 ASN142 MSE143 PHE144 ILE145 LYS146 ALA147 ILE148 GLU149 ARG150 GLY151 GLU152 VAL153 CYS154 ASP155 GLN156 HIS157 ASN158 PRO159 GLU160 ASP161 LEU162 ALA163 ASN164 LEU165 PHE166 HIS167 GLY168 ILE169 CYS170 TYR171 SER172 LEU173 PHE174 VAL175 GLN176 ALA177 ASN178 ARG179 THR180 ASN181 ASN182 THR183 ALA184 GLU185 LEU186 SER187 LYS188 LEU189 VAL190 SER191 SER192 TYR193 LEU194 ASP195 MSE196 LEU197 CYS198 ILE199 TYR200 LYS201 ARG202 GLU203 HIS204 GLU205
Unit 2 ALA0 MSE1 ASP2 SER3 ILE4 ALA5 LYS6 ARG7 PRO8 ARG9 THR10 ARG11 LEU12 SER13 PRO14 LEU15 LYS16 ARG17 LYS18 GLN19 GLN20 LEU21 MSE22 GLU23 ILE24 ALA25 LEU26 GLU27 VAL28 PHE29 ALA30 ARG31 ARG32 GLY33 ILE34 GLY35 ARG36 GLY37 GLY38 HIS39 ALA40 ASP41 ILE42 ALA43 GLU44 ILE45 ALA46 GLN47 VAL48 SER49 VAL50 ALA51 THR52 VAL53 PHE54 ASN55 TYR56 PHE57 PRO58 THR59 ARG60 GLU61 ASP62 LEU63 VAL64 ASP65 GLU66 VAL67 LEU68 ASN69 HIS70 VAL71 VAL72 ARG73 GLN74 PHE75 SER76 ASN77 PHE78 LEU79 SER80 ASP81 ASN82 ILE83 ASP84 LEU85 ASP86 LEU87 HIS88 ALA89 LYS90 GLU91 ASN92 ILE93 ALA94 ASN95 ILE96 THR97 ASN98 ALA99 MSE100 ILE101 GLU102 LEU103 VAL104 VAL105 GLN106 ASP107 ASN108 HIS109 TRP110 LEU111 LYS112 VAL113 TRP114 PHE115 GLU116 TRP117 SER118 ALA119 SER120 THR121 ARG122 ASP123 GLU124 VAL125 TRP126 PRO127 LEU128 PHE129 VAL130 THR131 THR132 ASN133 ARG134 THR135 ASN136 GLN137 LEU138 LEU139 VAL140 GLN141 ASN142 MSE143 PHE144 ILE145 LYS146 ALA147 ILE148 GLU149 ARG150 GLY151 GLU152 VAL153 CYS154 ASP155 GLN156 HIS157 ASN158 PRO159 GLU160 ASP161 LEU162 ALA163 ASN164 LEU165 PHE166 HIS167 GLY168 ILE169 CYS170 TYR171 SER172 LEU173 PHE174 VAL175 GLN176 ALA177 ASN178 ARG179 THR180 ASN181 ASN182 THR183 ALA184 GLU185 LEU186 SER187 LYS188 LEU189 VAL190 SER191 SER192 TYR193 LEU194 ASP195 MSE196 LEU197 CYS198 ILE199 TYR200 LYS201 ARG202
Unit 3 SER3 ILE4 ALA5 LYS6 ARG7 PRO8 ARG9 THR10 ARG11 LEU12 SER13 PRO14 LEU15 LYS16 ARG17 LYS18 GLN19 GLN20 LEU21 MSE22 GLU23 ILE24 ALA25 LEU26 GLU27 VAL28 PHE29 ALA30 ARG31 ARG32 GLY33 ILE34 GLY35 ARG36 GLY37 GLY38 HIS39 ALA40 ASP41 ILE42 ALA43 GLU44 ILE45 ALA46 GLN47 VAL48 SER49 VAL50 ALA51 THR52 VAL53 PHE54 ASN55 TYR56 PHE57 PRO58 THR59 ARG60 GLU61 ASP62 LEU63 VAL64 ASP65 GLU66 VAL67 LEU68 ASN69 HIS70 VAL71 VAL72 ARG73 GLN74 PHE75 SER76 ASN77 PHE78 LEU79 SER80 ASP81 ASN82 ILE83 ASP84 LEU85 ASP86 LEU87 HIS88 ALA89 LYS90 GLU91 ASN92 ILE93 ALA94 ASN95 ILE96 THR97 ASN98 ALA99 MSE100 ILE101 GLU102 LEU103 VAL104 VAL105 GLN106 ASP107 ASN108 HIS109 TRP110 LEU111 LYS112 VAL113 TRP114 PHE115 GLU116 TRP117 SER118 ALA119 SER120 THR121 ARG122 ASP123 GLU124 VAL125 TRP126 PRO127 LEU128 PHE129 VAL130 THR131 THR132 ASN133 ARG134 THR135 ASN136 GLN137 LEU138 LEU139 VAL140 GLN141 ASN142 MSE143 PHE144 ILE145 LYS146 ALA147 ILE148 GLU149 ARG150 GLY151 GLU152 VAL153 CYS154 ASP155 GLN156 HIS157 ASN158 PRO159 GLU160 ASP161 LEU162 ALA163 ASN164 LEU165 PHE166 HIS167 GLY168 ILE169 CYS170 TYR171 SER172 LEU173 PHE174 VAL175 GLN176 ALA177 ASN178 ARG179 THR180 ASN181 ASN182 THR183 ALA184 GLU185 LEU186 SER187 LYS188 LEU189 VAL190 SER191 SER192 TYR193 LEU194 ASP195 MSE196 LEU197 CYS198 ILE199 TYR200 LYS201 ARG202 GLU203 HIS204 GLU205
Unit 4 ALA5 LYS6 ARG7 PRO8 ARG9 THR10 ARG11 LEU12 SER13 PRO14 LEU15 LYS16 ARG17 LYS18 GLN19 GLN20 LEU21 MSE22 GLU23 ILE24 ALA25 LEU26 GLU27 VAL28 PHE29 ALA30 ARG31 ARG32 GLY33 ILE34 GLY35 ARG36 GLY37 GLY38 HIS39 ALA40 ASP41 ILE42 ALA43 GLU44 ILE45 ALA46 GLN47 VAL48 SER49 VAL50 ALA51 THR52 VAL53 PHE54 ASN55 TYR56 PHE57 PRO58 THR59 ARG60 GLU61 ASP62 LEU63 VAL64 ASP65 GLU66 VAL67 LEU68 ASN69 HIS70 VAL71 VAL72 ARG73 GLN74 PHE75 SER76 ASN77 PHE78 LEU79 SER80 ASP81 ASN82 ILE83 ASP84 LEU85 ASP86 LEU87 HIS88 ALA89 LYS90 GLU91 ASN92 ILE93 ALA94 ASN95 ILE96 THR97 ASN98 ALA99 MSE100 ILE101 GLU102 LEU103 VAL104 VAL105 GLN106 ASP107 ASN108 HIS109 TRP110 LEU111 LYS112 VAL113 TRP114 PHE115 GLU116 TRP117 SER118 ALA119 SER120 THR121 ARG122 ASP123 GLU124 VAL125 TRP126 PRO127 LEU128 PHE129 VAL130 THR131 THR132 ASN133 ARG134 THR135 ASN136 GLN137 LEU138 LEU139 VAL140 GLN141 ASN142 MSE143 PHE144 ILE145 LYS146 ALA147 ILE148 GLU149 ARG150 GLY151 GLU152 VAL153 CYS154 ASP155 GLN156 HIS157 ASN158 PRO159 GLU160 ASP161 LEU162 ALA163 ASN164 LEU165 PHE166 HIS167 GLY168 ILE169 CYS170 TYR171 SER172 LEU173 PHE174 VAL175 GLN176 ALA177 ASN178 ARG179 THR180 ASN181 ASN182 THR183 ALA184 GLU185 LEU186 SER187 LYS188 LEU189 VAL190 SER191 SER192 TYR193 LEU194 ASP195 MSE196 LEU197 CYS198 ILE199 TYR200 LYS201 ARG202 GLU203

Ligands
Unit 5 SO4206
Unit 6 SO4206
Unit 7 SO4206 SO4207
Unit 8 SO4206 SO4207

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany