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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF S. CEREVISIAE TRYPTOPHANYL-TRNA SYNTHET COMPLEX WITH TRP
Keywords TRYPTOPHANYL-TRNA SYNTHETASE, S. CEREVISIAE, SULFATE ION, AM ACTIVATION, CATALYTIC MECHANISM, AMINOACYL-TRNA SYNTHETASE, BINDING, CYTOPLASM, LIGASE, NUCLEOTIDE-BINDING, PROTEIN BIO
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3KT6     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC  A 409 3295 0
2  Protein   TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC  B 404 3257 0
3  Protein   TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC  C 404 3257 0
4  Protein   TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC  D 409 3295 0
5  Protein   TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC  A 5 0 35
6  Protein   TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC  B 3 0 25
7  Protein   TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC  C 4 0 30
8  Protein   TRYPTOPHANYL-TRNA SYNTHETASE, CYTOPLASMIC  D 3 0 25
9 Water     73 0 73
total       1714 13104 188

Proteins
Unit 1 LEU17 LYS18 SER19 THR20 ASP21 VAL22 LYS23 GLU24 GLN25 VAL26 VAL27 THR28 PRO29 TRP30 ASP31 VAL32 GLU33 GLY34 GLY35 VAL36 ASP37 GLU38 GLN39 GLY40 ARG41 ALA42 GLN43 ASN44 ILE45 ASP46 TYR47 ASP48 LYS49 LEU50 ILE51 LYS52 GLN53 PHE54 GLY55 THR56 LYS57 PRO58 VAL59 ASN60 GLU61 GLU62 THR63 LEU64 LYS65 ARG66 PHE67 LYS68 GLN69 VAL70 THR71 GLY72 ARG73 GLU74 PRO75 HIS76 HIS77 PHE78 LEU79 ARG80 LYS81 GLY82 LEU83 PHE84 PHE85 SER86 GLU87 ARG88 ASP89 PHE90 THR91 LYS92 ILE93 LEU94 ASP95 LEU96 TYR97 GLU98 GLN99 GLY100 LYS101 PRO102 PHE103 PHE104 LEU105 TYR106 THR107 GLY108 ARG109 GLY110 PRO111 SER112 SER113 ASP114 SER115 MET116 HIS117 LEU118 GLY119 HIS120 MET121 ILE122 PRO123 PHE124 VAL125 PHE126 THR127 LYS128 TRP129 LEU130 GLN131 GLU132 VAL133 PHE134 ASP135 VAL136 PRO137 LEU138 VAL139 ILE140 GLU141 LEU142 THR143 ASP144 ASP145 GLU146 LYS147 PHE148 LEU149 PHE150 LYS151 HIS152 LYS153 LEU154 THR155 ILE156 ASN157 ASP158 VAL159 LYS160 ASN161 PHE162 ALA163 ARG164 GLU165 ASN166 ALA167 LYS168 ASP169 ILE170 ILE171 ALA172 VAL173 GLY174 PHE175 ASP176 PRO177 LYS178 ASN179 THR180 PHE181 ILE182 PHE183 SER184 ASP185 LEU186 GLN187 TYR188 MET189 GLY190 GLY191 ALA192 PHE193 TYR194 GLU195 THR196 VAL197 VAL198 ARG199 VAL200 SER201 ARG202 GLN203 ILE204 THR205 GLY206 SER207 THR208 ALA209 LYS210 ALA211 VAL212 PHE213 GLY214 PHE215 ASN216 ASP217 SER218 ASP219 CYS220 ILE221 GLY222 LYS223 PHE224 HIS225 PHE226 ALA227 SER228 ILE229 GLN230 ILE231 ALA232 THR233 ALA234 PHE235 PRO236 SER237 SER238 PHE239 PRO240 ASN241 VAL242 LEU243 GLY244 LEU245 PRO246 ASP247 LYS248 THR249 PRO250 CYS251 LEU252 ILE253 PRO254 CYS255 ALA256 ILE257 ASP258 GLN259 ASP260 PRO261 TYR262 PHE263 ARG264 VAL265 CYS266 ARG267 ASP268 VAL269 ALA270 ASP271 LYS272 LEU273 LYS274 TYR275 SER276 LYS277 PRO278 ALA279 LEU280 LEU281 HIS282 SER283 ARG284 PHE285 PHE286 PRO287 ALA288 LEU289 GLN290 GLY291 SER292 THR293 THR294 LYS295 MET296 SER297 ALA298 SER299 ASP300 ASP301 THR302 THR303 ALA304 ILE305 PHE306 MET307 THR308 ASP309 THR310 PRO311 LYS312 GLN313 ILE314 GLN315 LYS316 LYS317 ILE318 ASN319 LYS320 TYR321 ALA322 PHE323 SER324 GLY325 GLY326 GLN327 VAL328 SER329 ALA330 ASP331 LEU332 HIS333 ARG334 GLU335 LEU336 GLY337 GLY338 ASN339 PRO340 ASP341 VAL342 ASP343 VAL344 ALA345 TYR346 GLN347 TYR348 LEU349 SER350 PHE351 PHE352 LYS353 ASP354 ASP355 ASP356 VAL357 PHE358 LEU359 LYS360 GLU361 CYS362 TYR363 ASP364 LYS365 TYR366 LYS367 SER368 GLY369 GLU370 LEU371 LEU372 SER373 GLY374 GLU375 MET376 LYS377 LYS378 LEU379 CYS380 ILE381 GLU382 THR383 LEU384 GLN385 GLU386 PHE387 VAL388 LYS389 ALA390 PHE391 GLN392 GLU393 ARG394 ARG395 ALA396 GLN397 VAL398 ASP399 GLU400 GLU401 THR402 LEU403 ASP404 LYS405 PHE406 MET407 VAL408 PRO409 HIS410 LYS411 LEU412 VAL413 TRP414 GLY415 GLU416 LYS417 GLU418 ARG419 LEU420 VAL421 ALA422 PRO423 LYS424 PRO425
Unit 2 VAL22 LYS23 GLU24 GLN25 VAL26 VAL27 THR28 PRO29 TRP30 ASP31 VAL32 GLU33 GLY34 GLY35 VAL36 ASP37 GLU38 GLN39 GLY40 ARG41 ALA42 GLN43 ASN44 ILE45 ASP46 TYR47 ASP48 LYS49 LEU50 ILE51 LYS52 GLN53 PHE54 GLY55 THR56 LYS57 PRO58 VAL59 ASN60 GLU61 GLU62 THR63 LEU64 LYS65 ARG66 PHE67 LYS68 GLN69 VAL70 THR71 GLY72 ARG73 GLU74 PRO75 HIS76 HIS77 PHE78 LEU79 ARG80 LYS81 GLY82 LEU83 PHE84 PHE85 SER86 GLU87 ARG88 ASP89 PHE90 THR91 LYS92 ILE93 LEU94 ASP95 LEU96 TYR97 GLU98 GLN99 GLY100 LYS101 PRO102 PHE103 PHE104 LEU105 TYR106 THR107 GLY108 ARG109 GLY110 PRO111 SER112 SER113 ASP114 SER115 MET116 HIS117 LEU118 GLY119 HIS120 MET121 ILE122 PRO123 PHE124 VAL125 PHE126 THR127 LYS128 TRP129 LEU130 GLN131 GLU132 VAL133 PHE134 ASP135 VAL136 PRO137 LEU138 VAL139 ILE140 GLU141 LEU142 THR143 ASP144 ASP145 GLU146 LYS147 PHE148 LEU149 PHE150 LYS151 HIS152 LYS153 LEU154 THR155 ILE156 ASN157 ASP158 VAL159 LYS160 ASN161 PHE162 ALA163 ARG164 GLU165 ASN166 ALA167 LYS168 ASP169 ILE170 ILE171 ALA172 VAL173 GLY174 PHE175 ASP176 PRO177 LYS178 ASN179 THR180 PHE181 ILE182 PHE183 SER184 ASP185 LEU186 GLN187 TYR188 MET189 GLY190 GLY191 ALA192 PHE193 TYR194 GLU195 THR196 VAL197 VAL198 ARG199 VAL200 SER201 ARG202 GLN203 ILE204 THR205 GLY206 SER207 THR208 ALA209 LYS210 ALA211 VAL212 PHE213 GLY214 PHE215 ASN216 ASP217 SER218 ASP219 CYS220 ILE221 GLY222 LYS223 PHE224 HIS225 PHE226 ALA227 SER228 ILE229 GLN230 ILE231 ALA232 THR233 ALA234 PHE235 PRO236 SER237 SER238 PHE239 PRO240 ASN241 VAL242 LEU243 GLY244 LEU245 PRO246 ASP247 LYS248 THR249 PRO250 CYS251 LEU252 ILE253 PRO254 CYS255 ALA256 ILE257 ASP258 GLN259 ASP260 PRO261 TYR262 PHE263 ARG264 VAL265 CYS266 ARG267 ASP268 VAL269 ALA270 ASP271 LYS272 LEU273 LYS274 TYR275 SER276 LYS277 PRO278 ALA279 LEU280 LEU281 HIS282 SER283 ARG284 PHE285 PHE286 PRO287 ALA288 LEU289 GLN290 GLY291 SER292 THR293 THR294 LYS295 MET296 SER297 ALA298 SER299 ASP300 ASP301 THR302 THR303 ALA304 ILE305 PHE306 MET307 THR308 ASP309 THR310 PRO311 LYS312 GLN313 ILE314 GLN315 LYS316 LYS317 ILE318 ASN319 LYS320 TYR321 ALA322 PHE323 SER324 GLY325 GLY326 GLN327 VAL328 SER329 ALA330 ASP331 LEU332 HIS333 ARG334 GLU335 LEU336 GLY337 GLY338 ASN339 PRO340 ASP341 VAL342 ASP343 VAL344 ALA345 TYR346 GLN347 TYR348 LEU349 SER350 PHE351 PHE352 LYS353 ASP354 ASP355 ASP356 VAL357 PHE358 LEU359 LYS360 GLU361 CYS362 TYR363 ASP364 LYS365 TYR366 LYS367 SER368 GLY369 GLU370 LEU371 LEU372 SER373 GLY374 GLU375 MET376 LYS377 LYS378 LEU379 CYS380 ILE381 GLU382 THR383 LEU384 GLN385 GLU386 PHE387 VAL388 LYS389 ALA390 PHE391 GLN392 GLU393 ARG394 ARG395 ALA396 GLN397 VAL398 ASP399 GLU400 GLU401 THR402 LEU403 ASP404 LYS405 PHE406 MET407 VAL408 PRO409 HIS410 LYS411 LEU412 VAL413 TRP414 GLY415 GLU416 LYS417 GLU418 ARG419 LEU420 VAL421 ALA422 PRO423 LYS424 PRO425
Unit 3 VAL22 LYS23 GLU24 GLN25 VAL26 VAL27 THR28 PRO29 TRP30 ASP31 VAL32 GLU33 GLY34 GLY35 VAL36 ASP37 GLU38 GLN39 GLY40 ARG41 ALA42 GLN43 ASN44 ILE45 ASP46 TYR47 ASP48 LYS49 LEU50 ILE51 LYS52 GLN53 PHE54 GLY55 THR56 LYS57 PRO58 VAL59 ASN60 GLU61 GLU62 THR63 LEU64 LYS65 ARG66 PHE67 LYS68 GLN69 VAL70 THR71 GLY72 ARG73 GLU74 PRO75 HIS76 HIS77 PHE78 LEU79 ARG80 LYS81 GLY82 LEU83 PHE84 PHE85 SER86 GLU87 ARG88 ASP89 PHE90 THR91 LYS92 ILE93 LEU94 ASP95 LEU96 TYR97 GLU98 GLN99 GLY100 LYS101 PRO102 PHE103 PHE104 LEU105 TYR106 THR107 GLY108 ARG109 GLY110 PRO111 SER112 SER113 ASP114 SER115 MET116 HIS117 LEU118 GLY119 HIS120 MET121 ILE122 PRO123 PHE124 VAL125 PHE126 THR127 LYS128 TRP129 LEU130 GLN131 GLU132 VAL133 PHE134 ASP135 VAL136 PRO137 LEU138 VAL139 ILE140 GLU141 LEU142 THR143 ASP144 ASP145 GLU146 LYS147 PHE148 LEU149 PHE150 LYS151 HIS152 LYS153 LEU154 THR155 ILE156 ASN157 ASP158 VAL159 LYS160 ASN161 PHE162 ALA163 ARG164 GLU165 ASN166 ALA167 LYS168 ASP169 ILE170 ILE171 ALA172 VAL173 GLY174 PHE175 ASP176 PRO177 LYS178 ASN179 THR180 PHE181 ILE182 PHE183 SER184 ASP185 LEU186 GLN187 TYR188 MET189 GLY190 GLY191 ALA192 PHE193 TYR194 GLU195 THR196 VAL197 VAL198 ARG199 VAL200 SER201 ARG202 GLN203 ILE204 THR205 GLY206 SER207 THR208 ALA209 LYS210 ALA211 VAL212 PHE213 GLY214 PHE215 ASN216 ASP217 SER218 ASP219 CYS220 ILE221 GLY222 LYS223 PHE224 HIS225 PHE226 ALA227 SER228 ILE229 GLN230 ILE231 ALA232 THR233 ALA234 PHE235 PRO236 SER237 SER238 PHE239 PRO240 ASN241 VAL242 LEU243 GLY244 LEU245 PRO246 ASP247 LYS248 THR249 PRO250 CYS251 LEU252 ILE253 PRO254 CYS255 ALA256 ILE257 ASP258 GLN259 ASP260 PRO261 TYR262 PHE263 ARG264 VAL265 CYS266 ARG267 ASP268 VAL269 ALA270 ASP271 LYS272 LEU273 LYS274 TYR275 SER276 LYS277 PRO278 ALA279 LEU280 LEU281 HIS282 SER283 ARG284 PHE285 PHE286 PRO287 ALA288 LEU289 GLN290 GLY291 SER292 THR293 THR294 LYS295 MET296 SER297 ALA298 SER299 ASP300 ASP301 THR302 THR303 ALA304 ILE305 PHE306 MET307 THR308 ASP309 THR310 PRO311 LYS312 GLN313 ILE314 GLN315 LYS316 LYS317 ILE318 ASN319 LYS320 TYR321 ALA322 PHE323 SER324 GLY325 GLY326 GLN327 VAL328 SER329 ALA330 ASP331 LEU332 HIS333 ARG334 GLU335 LEU336 GLY337 GLY338 ASN339 PRO340 ASP341 VAL342 ASP343 VAL344 ALA345 TYR346 GLN347 TYR348 LEU349 SER350 PHE351 PHE352 LYS353 ASP354 ASP355 ASP356 VAL357 PHE358 LEU359 LYS360 GLU361 CYS362 TYR363 ASP364 LYS365 TYR366 LYS367 SER368 GLY369 GLU370 LEU371 LEU372 SER373 GLY374 GLU375 MET376 LYS377 LYS378 LEU379 CYS380 ILE381 GLU382 THR383 LEU384 GLN385 GLU386 PHE387 VAL388 LYS389 ALA390 PHE391 GLN392 GLU393 ARG394 ARG395 ALA396 GLN397 VAL398 ASP399 GLU400 GLU401 THR402 LEU403 ASP404 LYS405 PHE406 MET407 VAL408 PRO409 HIS410 LYS411 LEU412 VAL413 TRP414 GLY415 GLU416 LYS417 GLU418 ARG419 LEU420 VAL421 ALA422 PRO423 LYS424 PRO425
Unit 4 LEU17 LYS18 SER19 THR20 ASP21 VAL22 LYS23 GLU24 GLN25 VAL26 VAL27 THR28 PRO29 TRP30 ASP31 VAL32 GLU33 GLY34 GLY35 VAL36 ASP37 GLU38 GLN39 GLY40 ARG41 ALA42 GLN43 ASN44 ILE45 ASP46 TYR47 ASP48 LYS49 LEU50 ILE51 LYS52 GLN53 PHE54 GLY55 THR56 LYS57 PRO58 VAL59 ASN60 GLU61 GLU62 THR63 LEU64 LYS65 ARG66 PHE67 LYS68 GLN69 VAL70 THR71 GLY72 ARG73 GLU74 PRO75 HIS76 HIS77 PHE78 LEU79 ARG80 LYS81 GLY82 LEU83 PHE84 PHE85 SER86 GLU87 ARG88 ASP89 PHE90 THR91 LYS92 ILE93 LEU94 ASP95 LEU96 TYR97 GLU98 GLN99 GLY100 LYS101 PRO102 PHE103 PHE104 LEU105 TYR106 THR107 GLY108 ARG109 GLY110 PRO111 SER112 SER113 ASP114 SER115 MET116 HIS117 LEU118 GLY119 HIS120 MET121 ILE122 PRO123 PHE124 VAL125 PHE126 THR127 LYS128 TRP129 LEU130 GLN131 GLU132 VAL133 PHE134 ASP135 VAL136 PRO137 LEU138 VAL139 ILE140 GLU141 LEU142 THR143 ASP144 ASP145 GLU146 LYS147 PHE148 LEU149 PHE150 LYS151 HIS152 LYS153 LEU154 THR155 ILE156 ASN157 ASP158 VAL159 LYS160 ASN161 PHE162 ALA163 ARG164 GLU165 ASN166 ALA167 LYS168 ASP169 ILE170 ILE171 ALA172 VAL173 GLY174 PHE175 ASP176 PRO177 LYS178 ASN179 THR180 PHE181 ILE182 PHE183 SER184 ASP185 LEU186 GLN187 TYR188 MET189 GLY190 GLY191 ALA192 PHE193 TYR194 GLU195 THR196 VAL197 VAL198 ARG199 VAL200 SER201 ARG202 GLN203 ILE204 THR205 GLY206 SER207 THR208 ALA209 LYS210 ALA211 VAL212 PHE213 GLY214 PHE215 ASN216 ASP217 SER218 ASP219 CYS220 ILE221 GLY222 LYS223 PHE224 HIS225 PHE226 ALA227 SER228 ILE229 GLN230 ILE231 ALA232 THR233 ALA234 PHE235 PRO236 SER237 SER238 PHE239 PRO240 ASN241 VAL242 LEU243 GLY244 LEU245 PRO246 ASP247 LYS248 THR249 PRO250 CYS251 LEU252 ILE253 PRO254 CYS255 ALA256 ILE257 ASP258 GLN259 ASP260 PRO261 TYR262 PHE263 ARG264 VAL265 CYS266 ARG267 ASP268 VAL269 ALA270 ASP271 LYS272 LEU273 LYS274 TYR275 SER276 LYS277 PRO278 ALA279 LEU280 LEU281 HIS282 SER283 ARG284 PHE285 PHE286 PRO287 ALA288 LEU289 GLN290 GLY291 SER292 THR293 THR294 LYS295 MET296 SER297 ALA298 SER299 ASP300 ASP301 THR302 THR303 ALA304 ILE305 PHE306 MET307 THR308 ASP309 THR310 PRO311 LYS312 GLN313 ILE314 GLN315 LYS316 LYS317 ILE318 ASN319 LYS320 TYR321 ALA322 PHE323 SER324 GLY325 GLY326 GLN327 VAL328 SER329 ALA330 ASP331 LEU332 HIS333 ARG334 GLU335 LEU336 GLY337 GLY338 ASN339 PRO340 ASP341 VAL342 ASP343 VAL344 ALA345 TYR346 GLN347 TYR348 LEU349 SER350 PHE351 PHE352 LYS353 ASP354 ASP355 ASP356 VAL357 PHE358 LEU359 LYS360 GLU361 CYS362 TYR363 ASP364 LYS365 TYR366 LYS367 SER368 GLY369 GLU370 LEU371 LEU372 SER373 GLY374 GLU375 MET376 LYS377 LYS378 LEU379 CYS380 ILE381 GLU382 THR383 LEU384 GLN385 GLU386 PHE387 VAL388 LYS389 ALA390 PHE391 GLN392 GLU393 ARG394 ARG395 ALA396 GLN397 VAL398 ASP399 GLU400 GLU401 THR402 LEU403 ASP404 LYS405 PHE406 MET407 VAL408 PRO409 HIS410 LYS411 LEU412 VAL413 TRP414 GLY415 GLU416 LYS417 GLU418 ARG419 LEU420 VAL421 ALA422 PRO423 LYS424 PRO425
Unit 5 TRP500 SO4501 SO4502 SO4503 SO4703
Unit 6 TRP700 SO4701 SO4702
Unit 7 TRP600 SO4601 SO4602 SO4603
Unit 8 TRP800 SO4801 SO4802

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany