3KDM - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HUMAN ANTI-STEROID FAB 5F2 IN COMPLEX W TESTOSTERONE
• Keywords: IMMUNE SYSTEM, ANTIBODY, IMMUNOGLOBULIN FAB FRAGMENT, ANTI-S
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3KDM	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	IMMUNOGLOBULIN LIGHT CHAIN	L	216	1627	0
2	Protein	IMMUNOGLOBULIN HEAVY CHAIN	H	223	1647	8
3	Protein	IMMUNOGLOBULIN LIGHT CHAIN	A	216	1627	0
4	Protein	IMMUNOGLOBULIN HEAVY CHAIN	B	223	1647	8
5	Ligand	IMMUNOGLOBULIN HEAVY CHAIN	H	1	0	21
6	Ligand	IMMUNOGLOBULIN HEAVY CHAIN	B	1	0	21
7	Water			919	0	919
total				1799	6548	977

Proteins

Unit 1	ALA 3 LEU 4 THR 5 GLN 6 PRO 7 ALA 8 SER 9 VAL 10 SER 11 GLY 12 SER 13 PRO 14 GLY 15 GLN 16 SER 17 ILE 18 THR 19 ILE 20 SER 21 CYS 22 THR 23 GLY 24 THR 25 SER 26 SER 27 ASP 28 VAL 29 GLY 30 GLY 31 TYR 32 ASN 33 TYR 34 VAL 35 SER 36 TRP 37 TYR 38 GLN 39 GLN 40 HIS 41 PRO 42 GLY 43 LYS 44 ALA 45 PRO 46 LYS 47 LEU 48 MET 49 ILE 50 TYR 51 GLY 52 VAL 53 THR 54 ASN 55 ARG 56 PRO 57 SER 58 GLY 59 VAL 60 SER 61 ASN 62 ARG 63 PHE 64 SER 65 GLY 66 SER 67 LYS 68 SER 69 GLY 70 ASN 71 THR 72 ALA 73 SER 74 LEU 75 THR 76 ILE 77 SER 78 GLY 79 LEU 80 GLN 81 ALA 82 GLY 83 ASP 84 GLU 85 ALA 86 ASP 87 TYR 88 TYR 89 CYS 90 SER 91 SER 92 TYR 93 THR 94 SER 95 THR 96 ARG 97 THR 98 PRO 99 TYR 100 VAL 101 PHE 102 GLY 103 THR 104 GLY 105 THR 106 LYS 107 VAL 108 GLU 109 ILE 110 LYS 111 ARG 112 THR 113 VAL 114 ALA 115 ALA 116 PRO 117 SER 118 VAL 119 PHE 120 ILE 121 PHE 122 PRO 123 PRO 124 SER 125 ASP 126 GLU 127 GLN 128 LEU 129 LYS 130 SER 131 GLY 132 THR 133 ALA 134 SER 135 VAL 136 VAL 137 CYS 138 LEU 139 LEU 140 ASN 141 ASN 142 PHE 143 TYR 144 PRO 145 ARG 146 GLU 147 ALA 148 LYS 149 VAL 150 GLN 151 TRP 152 LYS 153 VAL 154 ASP 155 ASN 156 ALA 157 LEU 158 GLN 159 SER 160 GLY 161 ASN 162 SER 163 GLN 164 GLU 165 SER 166 VAL 167 THR 168 GLU 169 GLN 170 ASP 171 SER 172 LYS 173 ASP 174 SER 175 THR 176 TYR 177 SER 178 LEU 179 SER 180 SER 181 THR 182 LEU 183 THR 184 LEU 185 SER 186 LYS 187 ALA 188 ASP 189 TYR 190 GLU 191 LYS 192 HIS 193 LYS 194 VAL 195 TYR 196 ALA 197 CYS 198 GLU 199 VAL 200 THR 201 HIS 202 GLN 203 GLY 204 LEU 205 SER 206 SER 207 PRO 208 VAL 209 THR 210 LYS 211 SER 212 PHE 213 ASN 214 ARG 215 GLY 216 GLU 217 CYS 218
Unit 2	PCA 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 ALA 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 ALA 50 ILE 51 SER 52 GLY 53 SER 54 GLY 55 GLY 56 SER 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 ASP 99 PRO 100 GLY 101 LEU 102 TRP 103 ASP 104 TYR 105 TYR 106 TYR 107 GLY 108 MET 109 ASP 110 VAL 111 TRP 112 GLY 113 GLN 114 GLY 115 THR 116 LEU 117 VAL 118 THR 119 VAL 120 SER 121 SER 122 ALA 123 SER 124 THR 125 LYS 126 GLY 127 PRO 128 SER 129 VAL 130 PHE 131 PRO 132 LEU 133 ALA 134 PRO 135 SER 136 SER 137 LYS 138 SER 139 THR 140 SER 141 GLY 142 GLY 143 THR 144 ALA 145 ALA 146 LEU 147 GLY 148 CYS 149 LEU 150 VAL 151 LYS 152 ASP 153 TYR 154 PHE 155 PRO 156 GLU 157 PRO 158 VAL 159 THR 160 VAL 161 SER 162 TRP 163 ASN 164 SER 165 GLY 166 ALA 167 LEU 168 THR 169 SER 170 SER 171 VAL 172 HIS 173 THR 174 PHE 175 PRO 176 ALA 177 VAL 178 LEU 179 GLN 180 SER 181 SER 182 GLY 183 LEU 184 TYR 185 SER 186 LEU 187 SER 188 SER 189 VAL 190 VAL 191 THR 192 VAL 193 PRO 194 SER 195 SER 196 SER 197 LEU 198 GLY 199 THR 200 GLN 201 THR 202 TYR 203 ILE 204 CYS 205 ASN 206 VAL 207 ASN 208 HIS 209 LYS 210 PRO 211 SER 212 ASN 213 THR 214 LYS 215 VAL 216 ASP 217 LYS 218 LYS 219 ALA 220 GLU 221 PRO 222 LYS 223
Unit 3	ALA 3 LEU 4 THR 5 GLN 6 PRO 7 ALA 8 SER 9 VAL 10 SER 11 GLY 12 SER 13 PRO 14 GLY 15 GLN 16 SER 17 ILE 18 THR 19 ILE 20 SER 21 CYS 22 THR 23 GLY 24 THR 25 SER 26 SER 27 ASP 28 VAL 29 GLY 30 GLY 31 TYR 32 ASN 33 TYR 34 VAL 35 SER 36 TRP 37 TYR 38 GLN 39 GLN 40 HIS 41 PRO 42 GLY 43 LYS 44 ALA 45 PRO 46 LYS 47 LEU 48 MET 49 ILE 50 TYR 51 GLY 52 VAL 53 THR 54 ASN 55 ARG 56 PRO 57 SER 58 GLY 59 VAL 60 SER 61 ASN 62 ARG 63 PHE 64 SER 65 GLY 66 SER 67 LYS 68 SER 69 GLY 70 ASN 71 THR 72 ALA 73 SER 74 LEU 75 THR 76 ILE 77 SER 78 GLY 79 LEU 80 GLN 81 ALA 82 GLY 83 ASP 84 GLU 85 ALA 86 ASP 87 TYR 88 TYR 89 CYS 90 SER 91 SER 92 TYR 93 THR 94 SER 95 THR 96 ARG 97 THR 98 PRO 99 TYR 100 VAL 101 PHE 102 GLY 103 THR 104 GLY 105 THR 106 LYS 107 VAL 108 GLU 109 ILE 110 LYS 111 ARG 112 THR 113 VAL 114 ALA 115 ALA 116 PRO 117 SER 118 VAL 119 PHE 120 ILE 121 PHE 122 PRO 123 PRO 124 SER 125 ASP 126 GLU 127 GLN 128 LEU 129 LYS 130 SER 131 GLY 132 THR 133 ALA 134 SER 135 VAL 136 VAL 137 CYS 138 LEU 139 LEU 140 ASN 141 ASN 142 PHE 143 TYR 144 PRO 145 ARG 146 GLU 147 ALA 148 LYS 149 VAL 150 GLN 151 TRP 152 LYS 153 VAL 154 ASP 155 ASN 156 ALA 157 LEU 158 GLN 159 SER 160 GLY 161 ASN 162 SER 163 GLN 164 GLU 165 SER 166 VAL 167 THR 168 GLU 169 GLN 170 ASP 171 SER 172 LYS 173 ASP 174 SER 175 THR 176 TYR 177 SER 178 LEU 179 SER 180 SER 181 THR 182 LEU 183 THR 184 LEU 185 SER 186 LYS 187 ALA 188 ASP 189 TYR 190 GLU 191 LYS 192 HIS 193 LYS 194 VAL 195 TYR 196 ALA 197 CYS 198 GLU 199 VAL 200 THR 201 HIS 202 GLN 203 GLY 204 LEU 205 SER 206 SER 207 PRO 208 VAL 209 THR 210 LYS 211 SER 212 PHE 213 ASN 214 ARG 215 GLY 216 GLU 217 CYS 218
Unit 4	PCA 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 ALA 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 VAL 48 SER 49 ALA 50 ILE 51 SER 52 GLY 53 SER 54 GLY 55 GLY 56 SER 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 SER 75 LYS 76 ASN 77 THR 78 LEU 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 ARG 87 ALA 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 ASP 99 PRO 100 GLY 101 LEU 102 TRP 103 ASP 104 TYR 105 TYR 106 TYR 107 GLY 108 MET 109 ASP 110 VAL 111 TRP 112 GLY 113 GLN 114 GLY 115 THR 116 LEU 117 VAL 118 THR 119 VAL 120 SER 121 SER 122 ALA 123 SER 124 THR 125 LYS 126 GLY 127 PRO 128 SER 129 VAL 130 PHE 131 PRO 132 LEU 133 ALA 134 PRO 135 SER 136 SER 137 LYS 138 SER 139 THR 140 SER 141 GLY 142 GLY 143 THR 144 ALA 145 ALA 146 LEU 147 GLY 148 CYS 149 LEU 150 VAL 151 LYS 152 ASP 153 TYR 154 PHE 155 PRO 156 GLU 157 PRO 158 VAL 159 THR 160 VAL 161 SER 162 TRP 163 ASN 164 SER 165 GLY 166 ALA 167 LEU 168 THR 169 SER 170 SER 171 VAL 172 HIS 173 THR 174 PHE 175 PRO 176 ALA 177 VAL 178 LEU 179 GLN 180 SER 181 SER 182 GLY 183 LEU 184 TYR 185 SER 186 LEU 187 SER 188 SER 189 VAL 190 VAL 191 THR 192 VAL 193 PRO 194 SER 195 SER 196 SER 197 LEU 198 GLY 199 THR 200 GLN 201 THR 202 TYR 203 ILE 204 CYS 205 ASN 206 VAL 207 ASN 208 HIS 209 LYS 210 PRO 211 SER 212 ASN 213 THR 214 LYS 215 VAL 216 ASP 217 LYS 218 LYS 219 ALA 220 GLU 221 PRO 222 LYS 223

Ligands

Unit 5	TES 226
Unit 6	TES 226