3KD6 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF NUCLEOSIDE KINASE FROM CHLOROBIUM TEPID COMPLEX WITH AMP
• Keywords: KINASE, PFKB, NUCLEOSIDE KINASE, AMP, PSI-II, NYSGXRC, STRUC GENOMICS, PROTEIN STRUCTURE INITIATIVE, NEW YORK SGX RESEAR FOR STRUCTURAL GENOMICS, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3KD6	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CARBOHYDRATE KINASE, PFKB FAMILY	A	300	2311	48
2	Protein	CARBOHYDRATE KINASE, PFKB FAMILY	B	298	2297	48
3	Ligand	CARBOHYDRATE KINASE, PFKB FAMILY	A	2	0	29
4	Ligand	CARBOHYDRATE KINASE, PFKB FAMILY	B	2	0	29
5	Water			266	0	266
total				868	4608	420

Proteins

Unit 1

LEU 1 SER 2 LEU 3 LEU 4 VAL 5 ILE 6 GLY 7 SER 8 LEU 9 ALA 10 PHE 11 ASP 12 ASP 13 ILE 14 GLU 15 THR 16 PRO 17 PHE 18 GLY 19 ARG 20 SER 21 ASP 22 ASN 23 THR 24 LEU 25 GLY 26 GLY 27 SER 28 SER 29 THR 30 TYR 31 ILE 32 ALA 33 LEU 34 SER 35 ALA 36 SER 37 TYR 38 PHE 39 THR 40 ASP 41 GLU 42 PRO 43 ILE 44 ARG 45 MSE 46 VAL 47 GLY 48 VAL 49 VAL 50 GLY 51 SER 52 ASP 53 PHE 54 GLY 55 LYS 56 GLU 57 HIS 58 PHE 59 ASP 60 LEU 61 LEU 62 HIS 63 ALA 64 LYS 65 ASN 66 ILE 67 ASP 68 THR 69 ARG 70 GLY 71 ILE 72 GLN 73 VAL 74 ILE 75 GLU 76 ASP 77 GLY 78 LYS 79 THR 80 PHE 81 ARG 82 TRP 83 ALA 84 GLY 85 ARG 86 TYR 87 HIS 88 TYR 89 ASP 90 MSE 91 ASN 92 THR 93 ARG 94 ASP 95 THR 96 LEU 97 ASP 98 THR 99 GLN 100 LEU 101 ASN 102 VAL 103 PHE 104 ALA 105 GLU 106 PHE 107 ASP 108 PRO 109 HIS 110 VAL 111 PRO 112 GLN 113 TYR 114 TYR 115 ARG 116 ASP 117 SER 118 LYS 119 PHE 120 VAL 121 CYS 122 LEU 123 GLY 124 ASN 125 ILE 126 ASP 127 PRO 128 GLU 129 LEU 130 GLN 131 LEU 132 LYS 133 VAL 134 LEU 135 ASP 136 GLN 137 ILE 138 ASP 139 ASP 140 PRO 141 LYS 142 LEU 143 VAL 144 VAL 145 CYS 146 ASP 147 THR 148 MSE 149 ASN 150 PHE 151 TRP 152 ILE 153 GLU 154 GLY 155 LYS 156 PRO 157 GLU 158 GLU 159 LEU 160 LYS 161 LYS 162 VAL 163 LEU 164 ALA 165 ARG 166 VAL 167 ASP 168 VAL 169 PHE 170 ILE 171 VAL 172 ASN 173 ASP 174 SER 175 GLU 176 ALA 177 ARG 178 LEU 179 LEU 180 SER 181 GLY 182 ASP 183 PRO 184 ASN 185 LEU 186 VAL 187 LYS 188 THR 189 ALA 190 ARG 191 ILE 192 ILE 193 ARG 194 GLU 195 MSE 196 GLY 197 PRO 198 LYS 199 THR 200 LEU 201 ILE 202 ILE 203 LYS 204 LYS 205 GLY 206 GLU 207 HIS 208 GLY 209 ALA 210 LEU 211 LEU 212 PHE 213 THR 214 ASP 215 ASN 216 GLY 217 ILE 218 PHE 219 ALA 220 ALA 221 PRO 222 ALA 223 PHE 224 PRO 225 LEU 226 GLU 227 SER 228 ILE 229 TYR 230 ASP 231 PRO 232 THR 233 GLY 234 ALA 235 GLY 236 ASP 237 THR 238 PHE 239 ALA 240 GLY 241 GLY 242 PHE 243 ILE 244 GLY 245 HIS 246 LEU 247 ALA 248 ARG 249 CYS 250 GLY 251 ASN 252 THR 253 SER 254 GLU 255 ALA 256 GLU 257 MSE 258 ARG 259 LYS 260 ALA 261 VAL 262 LEU 263 TYR 264 GLY 265 SER 266 ALA 267 MSE 268 ALA 269 SER 270 PHE 271 CYS 272 VAL 273 GLU 274 GLN 275 PHE 276 GLY 277 PRO 278 TYR 279 ARG 280 TYR 281 ASN 282 ASP 283 LEU 284 ASP 285 LEU 286 LEU 287 GLU 288 VAL 289 ASP 290 ASP 291 ARG 292 TYR 293 GLN 294 SER 295 PHE 296 LEU 297 GLU 298 LEU 299 SER 300

Unit 2

SER 2 LEU 3 LEU 4 VAL 5 ILE 6 GLY 7 SER 8 LEU 9 ALA 10 PHE 11 ASP 12 ASP 13 ILE 14 GLU 15 THR 16 PRO 17 PHE 18 GLY 19 ARG 20 SER 21 ASP 22 ASN 23 THR 24 LEU 25 GLY 26 GLY 27 SER 28 SER 29 THR 30 TYR 31 ILE 32 ALA 33 LEU 34 SER 35 ALA 36 SER 37 TYR 38 PHE 39 THR 40 ASP 41 GLU 42 PRO 43 ILE 44 ARG 45 MSE 46 VAL 47 GLY 48 VAL 49 VAL 50 GLY 51 SER 52 ASP 53 PHE 54 GLY 55 LYS 56 GLU 57 HIS 58 PHE 59 ASP 60 LEU 61 LEU 62 HIS 63 ALA 64 LYS 65 ASN 66 ILE 67 ASP 68 THR 69 ARG 70 GLY 71 ILE 72 GLN 73 VAL 74 ILE 75 GLU 76 ASP 77 GLY 78 LYS 79 THR 80 PHE 81 ARG 82 TRP 83 ALA 84 GLY 85 ARG 86 TYR 87 HIS 88 TYR 89 ASP 90 MSE 91 ASN 92 THR 93 ARG 94 ASP 95 THR 96 LEU 97 ASP 98 THR 99 GLN 100 LEU 101 ASN 102 VAL 103 PHE 104 ALA 105 GLU 106 PHE 107 ASP 108 PRO 109 HIS 110 VAL 111 PRO 112 GLN 113 TYR 114 TYR 115 ARG 116 ASP 117 SER 118 LYS 119 PHE 120 VAL 121 CYS 122 LEU 123 GLY 124 ASN 125 ILE 126 ASP 127 PRO 128 GLU 129 LEU 130 GLN 131 LEU 132 LYS 133 VAL 134 LEU 135 ASP 136 GLN 137 ILE 138 ASP 139 ASP 140 PRO 141 LYS 142 LEU 143 VAL 144 VAL 145 CYS 146 ASP 147 THR 148 MSE 149 ASN 150 PHE 151 TRP 152 ILE 153 GLU 154 GLY 155 LYS 156 PRO 157 GLU 158 GLU 159 LEU 160 LYS 161 LYS 162 VAL 163 LEU 164 ALA 165 ARG 166 VAL 167 ASP 168 VAL 169 PHE 170 ILE 171 VAL 172 ASN 173 ASP 174 SER 175 GLU 176 ALA 177 ARG 178 LEU 179 LEU 180 SER 181 GLY 182 ASP 183 PRO 184 ASN 185 LEU 186 VAL 187 LYS 188 THR 189 ALA 190 ARG 191 ILE 192 ILE 193 ARG 194 GLU 195 MSE 196 GLY 197 PRO 198 LYS 199 THR 200 LEU 201 ILE 202 ILE 203 LYS 204 LYS 205 GLY 206 GLU 207 HIS 208 GLY 209 ALA 210 LEU 211 LEU 212 PHE 213 THR 214 ASP 215 ASN 216 GLY 217 ILE 218 PHE 219 ALA 220 ALA 221 PRO 222 ALA 223 PHE 224 PRO 225 LEU 226 GLU 227 SER 228 ILE 229 TYR 230 ASP 231 PRO 232 THR 233 GLY 234 ALA 235 GLY 236 ASP 237 THR 238 PHE 239 ALA 240 GLY 241 GLY 242 PHE 243 ILE 244 GLY 245 HIS 246 LEU 247 ALA 248 ARG 249 CYS 250 GLY 251 ASN 252 THR 253 SER 254 GLU 255 ALA 256 GLU 257 MSE 258 ARG 259 LYS 260 ALA 261 VAL 262 LEU 263 TYR 264 GLY 265 SER 266 ALA 267 MSE 268 ALA 269 SER 270 PHE 271 CYS 272 VAL 273 GLU 274 GLN 275 PHE 276 GLY 277 PRO 278 TYR 279 ARG 280 TYR 281 ASN 282 ASP 283 LEU 284 ASP 285 LEU 286 LEU 287 GLU 288 VAL 289 ASP 290 ASP 291 ARG 292 TYR 293 GLN 294 SER 295 PHE 296 LEU 297 GLU 298 LEU 299

Ligands

Unit 3	GOL 501 AMP 509
Unit 4	GOL 501 AMP 509