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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF PROBABLE ALDEHYDE DEHYDROGENASE FROM LI MONOCYTOGENES EGD-E
Keywords STRUCTURAL GENOMICS, PSI-2, ALDEHYDE DEHYDROGENASE, PROTEIN INITIATIVE, NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GEN NYSGXRC, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3K9D     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALDEHYDE DEHYDROGENASE  A 454 3401 0
2  Protein   ALDEHYDE DEHYDROGENASE  B 454 3401 0
3  Protein   ALDEHYDE DEHYDROGENASE  C 454 3402 0
4  Protein   ALDEHYDE DEHYDROGENASE  D 453 3393 0
5  Ligand   ALDEHYDE DEHYDROGENASE  A 1 0 1
6  Ligand   ALDEHYDE DEHYDROGENASE  B 1 0 1
7  Ligand   ALDEHYDE DEHYDROGENASE  C 2 0 7
8 Water     476 0 476
total       2295 13597 485
Proteins
Unit 1 LEU3 GLU4 ASP5 LYS6 ASP7 LEU8 ARG9 SER10 ILE11 GLN12 GLU13 VAL14 ARG15 ASN16 LEU17 ILE18 GLU19 SER20 ALA21 ASN22 LYS23 ALA24 GLN25 LYS26 GLU27 LEU28 ALA29 ALA30 MET31 SER32 GLN33 GLN34 GLN35 ILE36 ASP37 THR38 ILE39 VAL40 LYS41 ALA42 ILE43 ALA44 ASP45 ALA46 GLY47 TYR48 GLY49 ALA50 ARG51 GLU52 LYS53 LEU54 ALA55 LYS56 MET57 ALA58 HIS59 GLU60 GLU61 THR62 GLY63 PHE64 GLY65 ILE66 TRP67 GLN68 ASP69 LYS70 VAL71 ILE72 LYS73 ASN74 VAL75 PHE76 ALA77 SER78 LYS79 HIS80 VAL81 TYR82 ASN83 TYR84 ILE85 LYS86 ASP87 MET88 LYS89 THR90 ILE91 GLY92 MET93 LEU94 LYS95 GLU96 ASP97 ASN98 GLU99 LYS100 LYS101 VAL102 MET103 GLU104 VAL105 ALA106 VAL107 PRO108 LEU109 GLY110 VAL111 VAL112 ALA113 GLY114 LEU115 ILE116 PRO117 SER118 THR119 ASN120 PRO121 THR122 SER123 THR124 VAL125 ILE126 TYR127 LYS128 THR129 LEU130 ILE131 SER132 ILE133 LYS134 ALA135 GLY136 ASN137 SER138 ILE139 VAL140 PHE141 SER142 PRO143 HIS144 PRO145 ASN146 ALA147 LEU148 LYS149 ALA150 ILE151 LEU152 GLU153 THR154 VAL155 ARG156 ILE157 ILE158 SER159 GLU160 ALA161 ALA162 GLU163 LYS164 ALA165 GLY166 CYS167 PRO168 LYS169 GLY170 ALA171 ILE172 SER173 CYS174 MET175 THR176 VAL177 PRO178 THR179 ILE180 GLN181 GLY182 THR183 ASP184 GLN185 LEU186 MET187 LYS188 HIS189 LYS190 ASP191 THR192 ALA193 VAL194 ILE195 LEU196 ALA197 THR198 GLY199 GLY200 SER201 ALA202 MET203 VAL204 LYS205 ALA206 ALA207 TYR208 SER209 SER210 GLY211 THR212 PRO213 ALA214 ILE215 GLY216 VAL217 GLY218 PRO219 GLY220 ASN221 GLY222 PRO223 ALA224 PHE225 ILE226 GLU227 ARG228 SER229 ALA230 ASN231 ILE232 PRO233 ARG234 ALA235 VAL236 LYS237 HIS238 ILE239 LEU240 ASP241 SER242 LYS243 THR244 PHE245 ASP246 ASN247 GLY248 THR249 ILE250 CYS251 ALA252 SER253 GLU254 GLN255 SER256 VAL257 VAL258 VAL259 GLU260 ARG261 VAL262 ASN263 LYS264 GLU265 ALA266 VAL267 ILE268 ALA269 GLU270 PHE271 ARG272 LYS273 GLN274 GLY275 ALA276 HIS277 PHE278 LEU279 SER280 ASP281 ALA282 GLU283 ALA284 VAL285 GLN286 LEU287 GLY288 LYS289 PHE290 ILE291 LEU292 ARG293 PRO294 ASN295 GLY296 SER297 MET298 ASN299 PRO300 ALA301 ILE302 VAL303 GLY304 LYS305 SER306 VAL307 GLN308 HIS309 ILE310 ALA311 ASN312 LEU313 ALA314 GLY315 LEU316 THR317 VAL318 PRO319 ALA320 ASP321 ALA322 ARG323 VAL324 LEU325 ILE326 ALA327 GLU328 GLU329 THR330 LYS331 VAL332 GLY333 ALA334 LYS335 ILE336 PRO337 TYR338 SER339 ARG340 GLU341 LYS342 LEU343 ALA344 PRO345 ILE346 LEU347 ALA348 PHE349 TYR350 THR351 ALA352 GLU353 THR354 TRP355 GLN356 GLU357 ALA358 CYS359 GLU360 LEU361 SER362 MET363 ASP364 ILE365 LEU366 TYR367 HIS368 GLU369 GLY370 ALA371 GLY372 HIS373 THR374 LEU375 ILE376 ILE377 HIS378 SER379 GLU380 ASP381 LYS382 GLU383 ILE384 ILE385 ARG386 GLU387 PHE388 ALA389 LEU390 LYS391 LYS392 PRO393 VAL394 SER395 ARG396 LEU397 LEU398 VAL399 ASN400 THR401 PRO402 GLY403 ALA404 LEU405 GLY406 GLY407 ILE408 GLY409 ALA410 THR411 THR412 ASN413 LEU414 VAL415 PRO416 ALA417 LEU418 THR419 LEU420 GLY421 CYS422 GLY423 ALA424 VAL425 GLY426 GLY427 SER428 SER429 SER430 SER431 ASP432 ASN433 ILE434 GLY435 PRO436 GLU437 ASN438 LEU439 PHE440 ASN441 ILE442 ARG443 ARG444 ILE445 ALA446 THR447 GLY448 VAL449 LEU450 GLU451 LEU452 GLU453 ASP454 ILE455 ARG456
Unit 2 LEU3 GLU4 ASP5 LYS6 ASP7 LEU8 ARG9 SER10 ILE11 GLN12 GLU13 VAL14 ARG15 ASN16 LEU17 ILE18 GLU19 SER20 ALA21 ASN22 LYS23 ALA24 GLN25 LYS26 GLU27 LEU28 ALA29 ALA30 MET31 SER32 GLN33 GLN34 GLN35 ILE36 ASP37 THR38 ILE39 VAL40 LYS41 ALA42 ILE43 ALA44 ASP45 ALA46 GLY47 TYR48 GLY49 ALA50 ARG51 GLU52 LYS53 LEU54 ALA55 LYS56 MET57 ALA58 HIS59 GLU60 GLU61 THR62 GLY63 PHE64 GLY65 ILE66 TRP67 GLN68 ASP69 LYS70 VAL71 ILE72 LYS73 ASN74 VAL75 PHE76 ALA77 SER78 LYS79 HIS80 VAL81 TYR82 ASN83 TYR84 ILE85 LYS86 ASP87 MET88 LYS89 THR90 ILE91 GLY92 MET93 LEU94 LYS95 GLU96 ASP97 ASN98 GLU99 LYS100 LYS101 VAL102 MET103 GLU104 VAL105 ALA106 VAL107 PRO108 LEU109 GLY110 VAL111 VAL112 ALA113 GLY114 LEU115 ILE116 PRO117 SER118 THR119 ASN120 PRO121 THR122 SER123 THR124 VAL125 ILE126 TYR127 LYS128 THR129 LEU130 ILE131 SER132 ILE133 LYS134 ALA135 GLY136 ASN137 SER138 ILE139 VAL140 PHE141 SER142 PRO143 HIS144 PRO145 ASN146 ALA147 LEU148 LYS149 ALA150 ILE151 LEU152 GLU153 THR154 VAL155 ARG156 ILE157 ILE158 SER159 GLU160 ALA161 ALA162 GLU163 LYS164 ALA165 GLY166 CYS167 PRO168 LYS169 GLY170 ALA171 ILE172 SER173 CYS174 MET175 THR176 VAL177 PRO178 THR179 ILE180 GLN181 GLY182 THR183 ASP184 GLN185 LEU186 MET187 LYS188 HIS189 LYS190 ASP191 THR192 ALA193 VAL194 ILE195 LEU196 ALA197 THR198 GLY199 GLY200 SER201 ALA202 MET203 VAL204 LYS205 ALA206 ALA207 TYR208 SER209 SER210 GLY211 THR212 PRO213 ALA214 ILE215 GLY216 VAL217 GLY218 PRO219 GLY220 ASN221 GLY222 PRO223 ALA224 PHE225 ILE226 GLU227 ARG228 SER229 ALA230 ASN231 ILE232 PRO233 ARG234 ALA235 VAL236 LYS237 HIS238 ILE239 LEU240 ASP241 SER242 LYS243 THR244 PHE245 ASP246 ASN247 GLY248 THR249 ILE250 CYS251 ALA252 SER253 GLU254 GLN255 SER256 VAL257 VAL258 VAL259 GLU260 ARG261 VAL262 ASN263 LYS264 GLU265 ALA266 VAL267 ILE268 ALA269 GLU270 PHE271 ARG272 LYS273 GLN274 GLY275 ALA276 HIS277 PHE278 LEU279 SER280 ASP281 ALA282 GLU283 ALA284 VAL285 GLN286 LEU287 GLY288 LYS289 PHE290 ILE291 LEU292 ARG293 PRO294 ASN295 GLY296 SER297 MET298 ASN299 PRO300 ALA301 ILE302 VAL303 GLY304 LYS305 SER306 VAL307 GLN308 HIS309 ILE310 ALA311 ASN312 LEU313 ALA314 GLY315 LEU316 THR317 VAL318 PRO319 ALA320 ASP321 ALA322 ARG323 VAL324 LEU325 ILE326 ALA327 GLU328 GLU329 THR330 LYS331 VAL332 GLY333 ALA334 LYS335 ILE336 PRO337 TYR338 SER339 ARG340 GLU341 LYS342 LEU343 ALA344 PRO345 ILE346 LEU347 ALA348 PHE349 TYR350 THR351 ALA352 GLU353 THR354 TRP355 GLN356 GLU357 ALA358 CYS359 GLU360 LEU361 SER362 MET363 ASP364 ILE365 LEU366 TYR367 HIS368 GLU369 GLY370 ALA371 GLY372 HIS373 THR374 LEU375 ILE376 ILE377 HIS378 SER379 GLU380 ASP381 LYS382 GLU383 ILE384 ILE385 ARG386 GLU387 PHE388 ALA389 LEU390 LYS391 LYS392 PRO393 VAL394 SER395 ARG396 LEU397 LEU398 VAL399 ASN400 THR401 PRO402 GLY403 ALA404 LEU405 GLY406 GLY407 ILE408 GLY409 ALA410 THR411 THR412 ASN413 LEU414 VAL415 PRO416 ALA417 LEU418 THR419 LEU420 GLY421 CYS422 GLY423 ALA424 VAL425 GLY426 GLY427 SER428 SER429 SER430 SER431 ASP432 ASN433 ILE434 GLY435 PRO436 GLU437 ASN438 LEU439 PHE440 ASN441 ILE442 ARG443 ARG444 ILE445 ALA446 THR447 GLY448 VAL449 LEU450 GLU451 LEU452 GLU453 ASP454 ILE455 ARG456
Unit 3 GLU4 ASP5 LYS6 ASP7 LEU8 ARG9 SER10 ILE11 GLN12 GLU13 VAL14 ARG15 ASN16 LEU17 ILE18 GLU19 SER20 ALA21 ASN22 LYS23 ALA24 GLN25 LYS26 GLU27 LEU28 ALA29 ALA30 MET31 SER32 GLN33 GLN34 GLN35 ILE36 ASP37 THR38 ILE39 VAL40 LYS41 ALA42 ILE43 ALA44 ASP45 ALA46 GLY47 TYR48 GLY49 ALA50 ARG51 GLU52 LYS53 LEU54 ALA55 LYS56 MET57 ALA58 HIS59 GLU60 GLU61 THR62 GLY63 PHE64 GLY65 ILE66 TRP67 GLN68 ASP69 LYS70 VAL71 ILE72 LYS73 ASN74 VAL75 PHE76 ALA77 SER78 LYS79 HIS80 VAL81 TYR82 ASN83 TYR84 ILE85 LYS86 ASP87 MET88 LYS89 THR90 ILE91 GLY92 MET93 LEU94 LYS95 GLU96 ASP97 ASN98 GLU99 LYS100 LYS101 VAL102 MET103 GLU104 VAL105 ALA106 VAL107 PRO108 LEU109 GLY110 VAL111 VAL112 ALA113 GLY114 LEU115 ILE116 PRO117 SER118 THR119 ASN120 PRO121 THR122 SER123 THR124 VAL125 ILE126 TYR127 LYS128 THR129 LEU130 ILE131 SER132 ILE133 LYS134 ALA135 GLY136 ASN137 SER138 ILE139 VAL140 PHE141 SER142 PRO143 HIS144 PRO145 ASN146 ALA147 LEU148 LYS149 ALA150 ILE151 LEU152 GLU153 THR154 VAL155 ARG156 ILE157 ILE158 SER159 GLU160 ALA161 ALA162 GLU163 LYS164 ALA165 GLY166 CYS167 PRO168 LYS169 GLY170 ALA171 ILE172 SER173 CYS174 MET175 THR176 VAL177 PRO178 THR179 ILE180 GLN181 GLY182 THR183 ASP184 GLN185 LEU186 MET187 LYS188 HIS189 LYS190 ASP191 THR192 ALA193 VAL194 ILE195 LEU196 ALA197 THR198 GLY199 GLY200 SER201 ALA202 MET203 VAL204 LYS205 ALA206 ALA207 TYR208 SER209 SER210 GLY211 THR212 PRO213 ALA214 ILE215 GLY216 VAL217 GLY218 PRO219 GLY220 ASN221 GLY222 PRO223 ALA224 PHE225 ILE226 GLU227 ARG228 SER229 ALA230 ASN231 ILE232 PRO233 ARG234 ALA235 VAL236 LYS237 HIS238 ILE239 LEU240 ASP241 SER242 LYS243 THR244 PHE245 ASP246 ASN247 GLY248 THR249 ILE250 CYS251 ALA252 SER253 GLU254 GLN255 SER256 VAL257 VAL258 VAL259 GLU260 ARG261 VAL262 ASN263 LYS264 GLU265 ALA266 VAL267 ILE268 ALA269 GLU270 PHE271 ARG272 LYS273 GLN274 GLY275 ALA276 HIS277 PHE278 LEU279 SER280 ASP281 ALA282 GLU283 ALA284 VAL285 GLN286 LEU287 GLY288 LYS289 PHE290 ILE291 LEU292 ARG293 PRO294 ASN295 GLY296 SER297 MET298 ASN299 PRO300 ALA301 ILE302 VAL303 GLY304 LYS305 SER306 VAL307 GLN308 HIS309 ILE310 ALA311 ASN312 LEU313 ALA314 GLY315 LEU316 THR317 VAL318 PRO319 ALA320 ASP321 ALA322 ARG323 VAL324 LEU325 ILE326 ALA327 GLU328 GLU329 THR330 LYS331 VAL332 GLY333 ALA334 LYS335 ILE336 PRO337 TYR338 SER339 ARG340 GLU341 LYS342 LEU343 ALA344 PRO345 ILE346 LEU347 ALA348 PHE349 TYR350 THR351 ALA352 GLU353 THR354 TRP355 GLN356 GLU357 ALA358 CYS359 GLU360 LEU361 SER362 MET363 ASP364 ILE365 LEU366 TYR367 HIS368 GLU369 GLY370 ALA371 GLY372 HIS373 THR374 LEU375 ILE376 ILE377 HIS378 SER379 GLU380 ASP381 LYS382 GLU383 ILE384 ILE385 ARG386 GLU387 PHE388 ALA389 LEU390 LYS391 LYS392 PRO393 VAL394 SER395 ARG396 LEU397 LEU398 VAL399 ASN400 THR401 PRO402 GLY403 ALA404 LEU405 GLY406 GLY407 ILE408 GLY409 ALA410 THR411 THR412 ASN413 LEU414 VAL415 PRO416 ALA417 LEU418 THR419 LEU420 GLY421 CYS422 GLY423 ALA424 VAL425 GLY426 GLY427 SER428 SER429 SER430 SER431 ASP432 ASN433 ILE434 GLY435 PRO436 GLU437 ASN438 LEU439 PHE440 ASN441 ILE442 ARG443 ARG444 ILE445 ALA446 THR447 GLY448 VAL449 LEU450 GLU451 LEU452 GLU453 ASP454 ILE455 ARG456 GLU457
Unit 4 GLU4 ASP5 LYS6 ASP7 LEU8 ARG9 SER10 ILE11 GLN12 GLU13 VAL14 ARG15 ASN16 LEU17 ILE18 GLU19 SER20 ALA21 ASN22 LYS23 ALA24 GLN25 LYS26 GLU27 LEU28 ALA29 ALA30 MET31 SER32 GLN33 GLN34 GLN35 ILE36 ASP37 THR38 ILE39 VAL40 LYS41 ALA42 ILE43 ALA44 ASP45 ALA46 GLY47 TYR48 GLY49 ALA50 ARG51 GLU52 LYS53 LEU54 ALA55 LYS56 MET57 ALA58 HIS59 GLU60 GLU61 THR62 GLY63 PHE64 GLY65 ILE66 TRP67 GLN68 ASP69 LYS70 VAL71 ILE72 LYS73 ASN74 VAL75 PHE76 ALA77 SER78 LYS79 HIS80 VAL81 TYR82 ASN83 TYR84 ILE85 LYS86 ASP87 MET88 LYS89 THR90 ILE91 GLY92 MET93 LEU94 LYS95 GLU96 ASP97 ASN98 GLU99 LYS100 LYS101 VAL102 MET103 GLU104 VAL105 ALA106 VAL107 PRO108 LEU109 GLY110 VAL111 VAL112 ALA113 GLY114 LEU115 ILE116 PRO117 SER118 THR119 ASN120 PRO121 THR122 SER123 THR124 VAL125 ILE126 TYR127 LYS128 THR129 LEU130 ILE131 SER132 ILE133 LYS134 ALA135 GLY136 ASN137 SER138 ILE139 VAL140 PHE141 SER142 PRO143 HIS144 PRO145 ASN146 ALA147 LEU148 LYS149 ALA150 ILE151 LEU152 GLU153 THR154 VAL155 ARG156 ILE157 ILE158 SER159 GLU160 ALA161 ALA162 GLU163 LYS164 ALA165 GLY166 CYS167 PRO168 LYS169 GLY170 ALA171 ILE172 SER173 CYS174 MET175 THR176 VAL177 PRO178 THR179 ILE180 GLN181 GLY182 THR183 ASP184 GLN185 LEU186 MET187 LYS188 HIS189 LYS190 ASP191 THR192 ALA193 VAL194 ILE195 LEU196 ALA197 THR198 GLY199 GLY200 SER201 ALA202 MET203 VAL204 LYS205 ALA206 ALA207 TYR208 SER209 SER210 GLY211 THR212 PRO213 ALA214 ILE215 GLY216 VAL217 GLY218 PRO219 GLY220 ASN221 GLY222 PRO223 ALA224 PHE225 ILE226 GLU227 ARG228 SER229 ALA230 ASN231 ILE232 PRO233 ARG234 ALA235 VAL236 LYS237 HIS238 ILE239 LEU240 ASP241 SER242 LYS243 THR244 PHE245 ASP246 ASN247 GLY248 THR249 ILE250 CYS251 ALA252 SER253 GLU254 GLN255 SER256 VAL257 VAL258 VAL259 GLU260 ARG261 VAL262 ASN263 LYS264 GLU265 ALA266 VAL267 ILE268 ALA269 GLU270 PHE271 ARG272 LYS273 GLN274 GLY275 ALA276 HIS277 PHE278 LEU279 SER280 ASP281 ALA282 GLU283 ALA284 VAL285 GLN286 LEU287 GLY288 LYS289 PHE290 ILE291 LEU292 ARG293 PRO294 ASN295 GLY296 SER297 MET298 ASN299 PRO300 ALA301 ILE302 VAL303 GLY304 LYS305 SER306 VAL307 GLN308 HIS309 ILE310 ALA311 ASN312 LEU313 ALA314 GLY315 LEU316 THR317 VAL318 PRO319 ALA320 ASP321 ALA322 ARG323 VAL324 LEU325 ILE326 ALA327 GLU328 GLU329 THR330 LYS331 VAL332 GLY333 ALA334 LYS335 ILE336 PRO337 TYR338 SER339 ARG340 GLU341 LYS342 LEU343 ALA344 PRO345 ILE346 LEU347 ALA348 PHE349 TYR350 THR351 ALA352 GLU353 THR354 TRP355 GLN356 GLU357 ALA358 CYS359 GLU360 LEU361 SER362 MET363 ASP364 ILE365 LEU366 TYR367 HIS368 GLU369 GLY370 ALA371 GLY372 HIS373 THR374 LEU375 ILE376 ILE377 HIS378 SER379 GLU380 ASP381 LYS382 GLU383 ILE384 ILE385 ARG386 GLU387 PHE388 ALA389 LEU390 LYS391 LYS392 PRO393 VAL394 SER395 ARG396 LEU397 LEU398 VAL399 ASN400 THR401 PRO402 GLY403 ALA404 LEU405 GLY406 GLY407 ILE408 GLY409 ALA410 THR411 THR412 ASN413 LEU414 VAL415 PRO416 ALA417 LEU418 THR419 LEU420 GLY421 CYS422 GLY423 ALA424 VAL425 GLY426 GLY427 SER428 SER429 SER430 SER431 ASP432 ASN433 ILE434 GLY435 PRO436 GLU437 ASN438 LEU439 PHE440 ASN441 ILE442 ARG443 ARG444 ILE445 ALA446 THR447 GLY448 VAL449 LEU450 GLU451 LEU452 GLU453 ASP454 ILE455 ARG456
Ligands
Unit 5 CL465
Unit 6 CL465
Unit 7 CL465 GOL466
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany