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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL BASIS FOR VESICLE TETHERING BY THE DSL1 COMPLEX
Keywords INTRACELLULAR TRAFFICKING, DSL1 COMPLEX, MULTISUBUNIT TETHERING COMPLEX, SNARE PROTEINS, ENDOPLASMIC RETICULUM, ER-GOLGI TRANSPORT, MEMBRANE, PROTEIN TRANSPORT, TRANSPORT
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3K8P     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DSL1  C 295 2416 48
2  Protein   PROTEIN TRANSPORT PROTEIN SEC39  D 594 4797 112
3 Water     3 0 3
total       892 7213 163
Proteins
Unit 1 ASN333 ILE334 TYR335 THR336 THR337 LEU338 LYS339 PHE340 GLU341 SER342 MSE343 MSE344 GLN345 GLN346 ARG347 VAL348 ILE349 GLN350 ILE351 ARG352 SER353 ILE354 PRO355 GLU356 GLU357 GLU358 TYR359 HIS360 GLU361 LEU362 VAL363 SER364 VAL365 GLN366 PRO424 ILE425 GLN426 VAL427 SER428 VAL429 PHE430 VAL431 GLN432 SER433 ALA434 ALA435 LYS436 VAL437 PHE438 THR439 GLU440 PHE441 GLU442 GLN443 GLY444 CYS445 ASP446 THR447 ILE448 GLY449 ARG450 SER451 LYS452 VAL453 GLU454 SER455 ILE456 TYR457 LEU458 TYR459 LYS460 PHE461 ASN462 LEU463 LEU464 GLN465 THR466 ALA467 PHE468 PHE469 ALA470 MSE471 VAL472 SER473 GLU474 LYS475 VAL476 ASN477 ASP478 TRP479 THR480 GLN481 LEU482 TYR483 LYS484 ASP485 VAL486 ARG487 TYR488 LEU489 TYR490 THR491 GLU492 ASN493 PRO494 LYS495 LEU496 LEU497 GLN498 LEU499 MSE500 GLU501 LEU502 ASN503 SER504 ARG505 ARG506 LEU507 ASP508 LEU509 ASN510 LEU511 ASN512 LEU513 ILE514 LYS515 LYS516 THR517 ILE518 TYR519 LYS520 LEU521 VAL522 ASN523 ASP524 GLN525 LEU526 GLN527 GLU528 LEU529 LYS530 ASP531 ASN532 GLU533 ARG534 THR535 PRO536 ASP537 TRP538 ASP539 ILE540 THR541 ILE542 SER543 SER544 LEU545 LEU546 PRO547 TYR548 LEU549 LYS550 LYS551 THR552 ALA553 LEU554 PRO555 THR556 LEU557 TYR558 LYS559 LEU560 GLU561 ASP562 ASN563 THR564 ILE565 LEU566 VAL567 ALA568 LEU569 ILE570 ARG571 TYR572 ILE573 VAL574 HIS575 ASP576 LEU577 VAL578 ILE579 ASP580 ASN581 ILE582 LEU583 HIS584 TRP585 ARG586 VAL587 ILE588 SER589 GLU590 LYS591 SER592 SER593 GLU594 ASN595 LEU596 SER597 GLU598 PHE599 ILE600 MSE601 LEU602 LEU603 LEU604 SER605 GLY606 LEU607 GLU608 ILE609 PRO610 ARG611 LEU612 ASN613 LEU614 ILE615 GLU616 THR617 TYR618 ARG619 HIS620 SER621 ARG622 GLU623 LYS624 LEU625 GLY626 ILE627 LEU628 SER629 LYS630 ILE631 LEU632 THR633 ALA634 HIS635 LEU636 LYS637 ASP638 ILE639 LEU640 GLU641 MSE642 PHE643 TYR644 GLU645 GLY646 GLU647 PHE648 PHE649 LEU650 PHE651 GLU652 THR653 ASP654 GLU655 ILE656 VAL657 GLN658 TRP659 ILE660 ILE661 LEU662 LEU663 PHE664 ALA665 ASP666 THR667 PRO668 THR669 ARG670 ARG671 ASP672 CYS673 ILE674 ASP675 GLU676 ILE677 ARG678 ARG679 VAL680 ARG681 GLU682 GLU683 ALA684
Unit 2 GLY30 SER31 GLN32 SER33 LYS34 TYR35 LEU36 GLU37 ILE38 LEU39 CYS40 VAL41 LEU42 TRP43 PRO44 GLU45 LEU46 ASP47 ASP48 PRO49 LYS50 ASN51 LEU52 LEU53 PHE54 LEU55 ARG56 GLU57 LEU58 GLU59 GLU60 GLU61 VAL62 TYR101 HIS102 GLU103 LEU104 GLN105 GLU106 PHE107 ILE108 SER109 LYS110 LYS111 LEU112 ASN113 ASN114 LYS115 THR116 LEU117 GLU118 ASN119 PHE120 GLU121 GLU122 TRP123 LEU124 ARG125 GLU126 ARG127 ILE128 LEU129 ILE130 CYS131 ASN132 GLU133 MSE134 ILE135 PRO136 GLU137 THR138 PRO139 LEU140 LEU141 TYR142 SER143 VAL144 LEU145 TRP146 GLU147 THR148 ALA149 LYS150 SER151 LYS152 VAL153 LEU154 SER155 THR156 LYS157 PHE158 ILE159 GLY160 TRP161 VAL162 GLU163 GLY164 VAL165 LEU166 LYS167 PRO168 LEU169 ASP170 HIS171 LEU172 ASN173 LYS174 ARG175 LEU176 HIS177 LEU178 ILE179 PHE180 LYS181 ILE182 ASN183 GLU184 TRP185 GLU186 LYS187 MSE188 PRO189 ASP190 SER191 GLU192 LEU193 PHE194 LYS195 ILE196 ILE197 PHE198 ASP199 ALA211 ASP212 VAL213 ILE214 GLU215 ASP216 GLU217 LEU218 ALA219 PRO220 THR221 LEU222 SER223 TYR224 GLY225 LYS226 LYS227 TRP228 GLU229 THR230 PHE231 ILE232 THR233 GLU234 PHE235 PHE236 ASN237 LYS238 GLN239 GLN240 PHE241 SER242 LEU243 LYS244 SER245 ASP246 THR247 ASN248 TYR249 GLN250 LEU251 PHE252 ILE253 LYS254 LEU255 TYR256 TYR257 SER258 LEU259 GLU260 LYS261 GLY262 VAL263 LYS264 GLU268 ALA269 SER270 ARG271 LYS272 LEU273 GLN274 SER275 ASN276 VAL277 VAL278 ASP279 ILE280 LEU281 PHE282 HIS283 ASN284 SER285 GLU286 ASN287 LEU288 PHE289 ASN290 LEU291 SER292 SER293 LEU294 THR295 HIS296 LYS297 LEU298 ASP299 GLU300 LEU301 TRP302 SER303 ILE304 LEU305 SER306 GLY307 PHE308 PRO309 ASP310 GLU311 ILE312 THR313 ILE314 GLU315 GLU316 GLN317 LYS318 THR319 ILE320 THR321 ALA322 LEU323 GLU324 MSE325 LYS326 GLN327 PHE328 MSE329 GLU330 PHE331 PHE332 ILE333 LYS334 CYS335 SER336 THR337 LYS338 PHE339 SER340 PHE341 LYS342 GLU343 ILE344 PHE345 ALA346 ILE347 THR348 GLN349 GLU350 GLU351 GLU352 SER353 ALA354 GLN355 LEU356 ALA357 HIS358 PHE359 SER360 SER361 LEU362 CYS363 HIS364 GLU365 GLU366 PHE367 ASN368 LYS369 ALA370 ASN371 GLU372 ILE373 SER374 SER375 PHE376 LEU377 GLN378 ALA379 MSE380 TYR381 GLU382 THR383 VAL384 LEU385 ASP386 ILE387 SER388 LYS389 ASP390 ASP391 LYS392 ILE393 PHE394 THR395 ARG396 ILE397 SER398 MSE399 ASP400 GLU401 LYS402 LEU403 TYR404 SER405 ILE406 LEU407 GLU408 ILE409 LEU410 LEU411 GLN412 MSE413 ASN414 GLU415 PHE416 ALA417 TYR418 ILE419 GLU420 ALA421 ILE422 ILE423 GLU424 ARG425 PHE426 ASP427 TYR428 SER429 ASN430 ASN431 THR432 GLN433 ILE434 TYR435 GLU436 LEU437 LEU438 VAL439 LYS440 PHE441 PHE442 TRP443 HIS444 PHE445 PHE446 ASN447 ASN448 ALA449 SER450 ASN451 GLY452 LEU453 ARG454 LYS455 GLU456 PRO457 GLU458 MSE459 LYS460 LYS461 ALA462 SER463 GLN464 THR465 LEU466 GLN467 ILE468 ILE469 GLN470 LYS471 HIS472 MSE473 SER474 GLN475 ARG476 ALA477 GLY478 THR479 ASN480 LEU481 THR482 LYS483 LEU484 GLU485 VAL486 LEU487 LEU488 GLU489 ILE490 SER491 ASP492 LYS493 LEU494 SER495 HIS496 TYR497 SER498 ILE499 ASN500 LEU501 ASN502 ALA512 PHE513 LYS514 PRO515 SER516 ASN517 ILE518 LEU519 GLU520 TYR521 ARG522 ASP523 CYS524 PRO525 LEU526 ASP527 ILE528 ILE529 SER530 ASN531 LEU532 LEU533 GLU534 LEU535 ASN536 PRO537 ARG538 LEU539 TYR540 LYS541 ASP542 LEU543 PRO544 THR545 THR546 LYS547 SER548 LEU549 LEU550 PHE551 GLY552 ILE553 TYR554 ASP555 SER556 LEU557 SER558 ILE559 ASN560 ARG561 GLU562 GLY563 GLN564 THR565 GLY566 LYS567 VAL568 GLU569 VAL570 ASP571 LEU572 MSE573 VAL574 LEU575 HIS576 ILE577 ASP578 TYR579 ALA580 LEU581 VAL582 ASN583 LEU584 ASP585 PHE586 GLY587 THR588 ALA589 TYR590 GLU591 LEU592 GLY593 LYS594 GLN595 VAL596 PHE597 GLU598 ILE599 CYS600 GLN601 GLU602 ALA603 GLY604 GLN605 HIS606 MSE607 MSE608 LYS609 ALA610 LEU611 GLY612 ASP613 GLU614 HIS615 TRP616 LEU617 THR618 PHE619 TYR620 GLN621 MSE622 GLY623 LYS624 PHE625 VAL626 ASP627 PRO628 ASN629 TRP630 VAL631 ASP632 ASN633 GLU634 ILE635 PRO636 THR637 GLU638 ILE639 ILE640 VAL641 LEU642 GLN643 MSE644 SER645 ILE646 LEU647 GLY648 ARG649 LEU650 LEU651 GLU652 VAL653 CYS654 PRO655 LEU656 GLU657 GLU658 VAL659 GLU660 ILE661 VAL662 THR663 SER664 GLN665 TRP666 SER667 THR668 LEU669 GLU670 LEU671 GLU672 LEU673 SER674 ALA675 ARG676 ASP677 LEU678 VAL679 LYS680 ASP681 LYS682 TYR683 ALA684
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany