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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE PTERIN-BINDING DOMAIN METR OF 5- METHYLTETRAHYDROFOLATE-HOMOCYSTEINE METHYLTRANSFERASE FROM BACTEROIDES THETAIOTAOMICRON
Keywords 5-METHYLTETRAHYDROFOLATE, METHYLTRANSFERASE, TIM BARREL, STR GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, MIDWEST CENT STRUCTURAL GENOMICS, MCSG, TRANSFERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3K13     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 286 2168 64
2  Protein    B 286 2157 64
3  Protein    C 287 2165 64
4  Ligand    A 7 0 54
5  Ligand    B 7 0 59
6  Ligand    C 6 0 53
7 Water     684 0 684
total       1563 6490 1042
Proteins
Unit 1 GLU350 ILE351 ASN352 PHE353 VAL354 ASN355 ILE356 GLY357 GLU358 ARG359 CYS360 ASN361 VAL362 ALA363 GLY364 SER365 ARG366 LYS367 PHE368 LEU369 ARG370 LEU371 VAL372 ASN373 GLU374 LYS375 LYS376 TYR377 ASP378 GLU379 ALA380 LEU381 SER382 ILE383 ALA384 ARG385 GLN386 GLN387 VAL388 GLU389 ASP390 GLY391 ALA392 LEU393 VAL394 ILE395 ASP396 VAL397 ASN398 MSE399 ASP400 ASP401 GLY402 LEU403 LEU404 ASP405 ALA406 ARG407 THR408 GLU409 MSE410 THR411 THR412 PHE413 LEU414 ASN415 LEU416 ILE417 MSE418 SER419 GLU420 PRO421 GLU422 ILE423 ALA424 ARG425 VAL426 PRO427 VAL428 MSE429 ILE430 ASP431 SER432 SER433 LYS434 TRP435 GLU436 VAL437 ILE438 GLU439 ALA440 GLY441 LEU442 LYS443 CYS444 LEU445 GLN446 GLY447 LYS448 SER449 ILE450 VAL451 ASN452 SER453 ILE454 SER455 LEU456 LYS457 GLU458 GLY459 GLU460 GLU461 VAL462 PHE463 LEU464 GLU465 HIS466 ALA467 ARG468 ILE469 ILE470 LYS471 GLN472 TYR473 GLY474 ALA475 ALA476 THR477 VAL478 VAL479 MSE480 ALA481 PHE482 ASP483 GLU484 LYS485 GLY486 GLN487 ALA488 ASP489 THR490 ALA491 ALA492 ARG493 LYS494 ILE495 GLU496 VAL497 CYS498 GLU499 ARG500 ALA501 TYR502 ARG503 LEU504 LEU505 VAL506 ASP507 LYS508 VAL509 GLY510 PHE511 ASN512 PRO513 HIS514 ASP515 ILE516 ILE517 PHE518 ASP519 PRO520 ASN521 VAL522 LEU523 ALA524 VAL525 ALA526 THR527 GLY528 ILE529 GLU530 GLU531 HIS532 ASN533 ASN534 TYR535 ALA536 VAL537 ASP538 PHE539 ILE540 GLU541 ALA542 THR543 GLY544 TRP545 ILE546 ARG547 LYS548 ASN549 LEU550 PRO551 GLY552 ALA553 HIS554 VAL555 SER556 GLY557 GLY558 VAL559 SER560 ASN561 LEU562 SER563 PHE564 SER565 PHE566 ARG567 GLY568 ASN569 ASN570 TYR571 ILE572 ARG573 GLU574 ALA575 MSE576 HIS577 ALA578 VAL579 PHE580 LEU581 TYR582 HIS583 ALA584 ILE585 GLN586 GLN587 GLY588 MSE589 ASP590 MSE591 GLY592 ILE593 VAL594 ASN595 PRO596 GLY597 SER599 VAL600 LEU601 TYR602 SER603 ASP604 ILE605 PRO606 ALA607 ASP608 THR609 LEU610 GLU611 LYS612 ILE613 GLU614 ASP615 VAL616 VAL617 LEU618 ASN619 ARG620 ARG621 PRO622 ASP623 ALA624 ALA625 GLU626 ARG627 LEU628 ILE629 GLU630 LEU631 ALA632 GLU633 ALA634 LEU635 LYS636
Unit 2 GLU350 ILE351 ASN352 PHE353 VAL354 ASN355 ILE356 GLY357 GLU358 ARG359 CYS360 ASN361 VAL362 ALA363 GLY364 SER365 ARG366 LYS367 PHE368 LEU369 ARG370 LEU371 VAL372 ASN373 GLU374 LYS375 LYS376 TYR377 ASP378 GLU379 ALA380 LEU381 SER382 ILE383 ALA384 ARG385 GLN386 GLN387 VAL388 GLU389 ASP390 GLY391 ALA392 LEU393 VAL394 ILE395 ASP396 VAL397 ASN398 MSE399 ASP400 ASP401 GLY402 LEU403 LEU404 ASP405 ALA406 ARG407 THR408 GLU409 MSE410 THR411 THR412 PHE413 LEU414 ASN415 LEU416 ILE417 MSE418 SER419 GLU420 PRO421 GLU422 ILE423 ALA424 ARG425 VAL426 PRO427 VAL428 MSE429 ILE430 ASP431 SER432 SER433 LYS434 TRP435 GLU436 VAL437 ILE438 GLU439 ALA440 GLY441 LEU442 LYS443 CYS444 LEU445 GLN446 GLY447 LYS448 SER449 ILE450 VAL451 ASN452 SER453 ILE454 SER455 LEU456 LYS457 GLU458 GLY459 GLU460 GLU461 VAL462 PHE463 LEU464 GLU465 HIS466 ALA467 ARG468 ILE469 ILE470 LYS471 GLN472 TYR473 GLY474 ALA475 ALA476 THR477 VAL478 VAL479 MSE480 ALA481 PHE482 ASP483 GLU484 LYS485 GLY486 GLN487 ALA488 ASP489 THR490 ALA491 ALA492 ARG493 LYS494 ILE495 GLU496 VAL497 CYS498 GLU499 ARG500 ALA501 TYR502 ARG503 LEU504 LEU505 VAL506 ASP507 LYS508 VAL509 GLY510 PHE511 ASN512 PRO513 HIS514 ASP515 ILE516 ILE517 PHE518 ASP519 PRO520 ASN521 VAL522 LEU523 ALA524 VAL525 ALA526 THR527 GLY528 ILE529 GLU530 GLU531 HIS532 ASN533 ASN534 TYR535 ALA536 VAL537 ASP538 PHE539 ILE540 GLU541 ALA542 THR543 GLY544 TRP545 ILE546 ARG547 LYS548 ASN549 LEU550 PRO551 GLY552 ALA553 HIS554 VAL555 SER556 GLY557 GLY558 VAL559 SER560 ASN561 LEU562 SER563 PHE564 SER565 PHE566 ARG567 GLY568 ASN569 ASN570 TYR571 ILE572 ARG573 GLU574 ALA575 MSE576 HIS577 ALA578 VAL579 PHE580 LEU581 TYR582 HIS583 ALA584 ILE585 GLN586 GLN587 GLY588 MSE589 ASP590 MSE591 GLY592 ILE593 VAL594 ASN595 PRO596 GLY597 SER599 VAL600 LEU601 TYR602 SER603 ASP604 ILE605 PRO606 ALA607 ASP608 THR609 LEU610 GLU611 LYS612 ILE613 GLU614 ASP615 VAL616 VAL617 LEU618 ASN619 ARG620 ARG621 PRO622 ASP623 ALA624 ALA625 GLU626 ARG627 LEU628 ILE629 GLU630 LEU631 ALA632 GLU633 ALA634 LEU635 LYS636
Unit 3 GLU350 ILE351 ASN352 PHE353 VAL354 ASN355 ILE356 GLY357 GLU358 ARG359 CYS360 ASN361 VAL362 ALA363 GLY364 SER365 ARG366 LYS367 PHE368 LEU369 ARG370 LEU371 VAL372 ASN373 GLU374 LYS375 LYS376 TYR377 ASP378 GLU379 ALA380 LEU381 SER382 ILE383 ALA384 ARG385 GLN386 GLN387 VAL388 GLU389 ASP390 GLY391 ALA392 LEU393 VAL394 ILE395 ASP396 VAL397 ASN398 MSE399 ASP400 ASP401 GLY402 LEU403 LEU404 ASP405 ALA406 ARG407 THR408 GLU409 MSE410 THR411 THR412 PHE413 LEU414 ASN415 LEU416 ILE417 MSE418 SER419 GLU420 PRO421 GLU422 ILE423 ALA424 ARG425 VAL426 PRO427 VAL428 MSE429 ILE430 ASP431 SER432 SER433 LYS434 TRP435 GLU436 VAL437 ILE438 GLU439 ALA440 GLY441 LEU442 LYS443 CYS444 LEU445 GLN446 GLY447 LYS448 SER449 ILE450 VAL451 ASN452 SER453 ILE454 SER455 LEU456 LYS457 GLU458 GLY459 GLU460 GLU461 VAL462 PHE463 LEU464 GLU465 HIS466 ALA467 ARG468 ILE469 ILE470 LYS471 GLN472 TYR473 GLY474 ALA475 ALA476 THR477 VAL478 VAL479 MSE480 ALA481 PHE482 ASP483 GLU484 LYS485 GLY486 GLN487 ALA488 ASP489 THR490 ALA491 ALA492 ARG493 LYS494 ILE495 GLU496 VAL497 CYS498 GLU499 ARG500 ALA501 TYR502 ARG503 LEU504 LEU505 VAL506 ASP507 LYS508 VAL509 GLY510 PHE511 ASN512 PRO513 HIS514 ASP515 ILE516 ILE517 PHE518 ASP519 PRO520 ASN521 VAL522 LEU523 ALA524 VAL525 ALA526 THR527 GLY528 ILE529 GLU530 GLU531 HIS532 ASN533 ASN534 TYR535 ALA536 VAL537 ASP538 PHE539 ILE540 GLU541 ALA542 THR543 GLY544 TRP545 ILE546 ARG547 LYS548 ASN549 LEU550 PRO551 GLY552 ALA553 HIS554 VAL555 SER556 GLY557 GLY558 VAL559 SER560 ASN561 LEU562 SER563 PHE564 SER565 PHE566 ARG567 GLY568 ASN569 ASN570 TYR571 ILE572 ARG573 GLU574 ALA575 MSE576 HIS577 ALA578 VAL579 PHE580 LEU581 TYR582 HIS583 ALA584 ILE585 GLN586 GLN587 GLY588 MSE589 ASP590 MSE591 GLY592 ILE593 VAL594 ASN595 PRO596 GLY597 SER599 VAL600 LEU601 TYR602 SER603 ASP604 ILE605 PRO606 ALA607 ASP608 THR609 LEU610 GLU611 LYS612 ILE613 GLU614 ASP615 VAL616 VAL617 LEU618 ASN619 ARG620 ARG621 PRO622 ASP623 ALA624 ALA625 GLU626 ARG627 LEU628 ILE629 GLU630 LEU631 ALA632 GLU633 ALA634 LEU635 LYS636 GLU637
Ligands
Unit 4 GOL1 THH642 GOL643 K644 K645 GOL646 NA647
Unit 5 GOL1 GOL642 THH643 NA644 GOL645 GOL646 NA647
Unit 6 GOL1 GOL642 THH643 NA644 GOL645 NA646
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany