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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF ADH-A FROM RHODOCOCCUS RUBER
Keywords DEHYDROGENASE, NUCLEOTIDE BINDING, ROSSMANN-FOLD, OXIDOREDUC
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3JV7     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ADH-A  A 345 2473 0
2  Protein   ADH-A  B 345 2473 0
3  Protein   ADH-A  C 345 2473 0
4  Protein   ADH-A  D 345 2473 0
5  Ligand   ADH-A  A 5 0 58
6  Ligand   ADH-A  B 5 0 58
7  Ligand   ADH-A  C 5 0 58
8  Ligand   ADH-A  D 5 0 58
9 Water     1184 0 1184
total       2584 9892 1416

Proteins
Unit 1 MET1 LYS2 ALA3 VAL4 GLN5 TYR6 THR7 GLU8 ILE9 GLY10 SER11 GLU12 PRO13 VAL14 VAL15 VAL16 ASP17 ILE18 PRO19 THR20 PRO21 THR22 PRO23 GLY24 PRO25 GLY26 GLU27 ILE28 LEU29 LEU30 LYS31 VAL32 THR33 ALA34 ALA35 GLY36 LEU37 CYS38 HIS39 SER40 ASP41 ILE42 PHE43 VAL44 MET45 ASP46 MET47 PRO48 ALA49 ALA50 GLN51 TYR52 ALA53 TYR54 GLY55 LEU56 PRO57 LEU58 THR59 LEU60 GLY61 HIS62 GLU63 GLY64 VAL65 GLY66 THR67 VAL68 ALA69 GLU70 LEU71 GLY72 GLU73 GLY74 VAL75 THR76 GLY77 PHE78 GLY79 VAL80 GLY81 ASP82 ALA83 VAL84 ALA85 VAL86 TYR87 GLY88 PRO89 TRP90 GLY91 CYS92 GLY93 ALA94 CYS95 HIS96 ALA97 CYS98 ALA99 ARG100 GLY101 ARG102 GLU103 ASN104 TYR105 CYS106 THR107 ARG108 ALA109 ALA110 ASP111 LEU112 GLY113 ILE114 THR115 PRO116 PRO117 GLY118 LEU119 GLY120 SER121 PRO122 GLY123 SER124 MET125 ALA126 GLU127 TYR128 MET129 ILE130 VAL131 ASP132 SER133 ALA134 ARG135 HIS136 LEU137 VAL138 PRO139 ILE140 GLY141 ASP142 LEU143 ASP144 PRO145 VAL146 ALA147 ALA148 ALA149 PRO150 LEU151 THR152 ASP153 ALA154 GLY155 LEU156 THR157 PRO158 TYR159 HIS160 ALA161 ILE162 SER163 ARG164 VAL165 LEU166 PRO167 LEU168 LEU169 GLY170 PRO171 GLY172 SER173 THR174 ALA175 VAL176 VAL177 ILE178 GLY179 VAL180 GLY181 GLY182 LEU183 GLY184 HIS185 VAL186 GLY187 ILE188 GLN189 ILE190 LEU191 ARG192 ALA193 VAL194 SER195 ALA196 ALA197 ARG198 VAL199 ILE200 ALA201 VAL202 ASP203 LEU204 ASP205 ASP206 ASP207 ARG208 LEU209 ALA210 LEU211 ALA212 ARG213 GLU214 VAL215 GLY216 ALA217 ASP218 ALA219 ALA220 VAL221 LYS222 SER223 GLY224 ALA225 GLY226 ALA227 ALA228 ASP229 ALA230 ILE231 ARG232 GLU233 LEU234 THR235 GLY236 GLY237 GLN238 GLY239 ALA240 THR241 ALA242 VAL243 PHE244 ASP245 PHE246 VAL247 GLY248 ALA249 GLN250 SER251 THR252 ILE253 ASP254 THR255 ALA256 GLN257 GLN258 VAL259 VAL260 ALA261 VAL262 ASP263 GLY264 HIS265 ILE266 SER267 VAL268 VAL269 GLY270 ILE271 HIS272 ALA273 GLY274 ALA275 HIS276 ALA277 LYS278 VAL279 GLY280 PHE281 PHE282 MET283 ILE284 PRO285 PHE286 GLY287 ALA288 SER289 VAL290 VAL291 THR292 PRO293 TYR294 TRP295 GLY296 THR297 ARG298 SER299 GLU300 LEU301 MET302 GLU303 VAL304 VAL305 ALA306 LEU307 ALA308 ARG309 ALA310 GLY311 ARG312 LEU313 ASP314 ILE315 HIS316 THR317 GLU318 THR319 PHE320 THR321 LEU322 ASP323 GLU324 GLY325 PRO326 ALA327 ALA328 TYR329 ARG330 ARG331 LEU332 ARG333 GLU334 GLY335 SER336 ILE337 ARG338 GLY339 ARG340 GLY341 VAL342 VAL343 VAL344 PRO345
Unit 2 MET1 LYS2 ALA3 VAL4 GLN5 TYR6 THR7 GLU8 ILE9 GLY10 SER11 GLU12 PRO13 VAL14 VAL15 VAL16 ASP17 ILE18 PRO19 THR20 PRO21 THR22 PRO23 GLY24 PRO25 GLY26 GLU27 ILE28 LEU29 LEU30 LYS31 VAL32 THR33 ALA34 ALA35 GLY36 LEU37 CYS38 HIS39 SER40 ASP41 ILE42 PHE43 VAL44 MET45 ASP46 MET47 PRO48 ALA49 ALA50 GLN51 TYR52 ALA53 TYR54 GLY55 LEU56 PRO57 LEU58 THR59 LEU60 GLY61 HIS62 GLU63 GLY64 VAL65 GLY66 THR67 VAL68 ALA69 GLU70 LEU71 GLY72 GLU73 GLY74 VAL75 THR76 GLY77 PHE78 GLY79 VAL80 GLY81 ASP82 ALA83 VAL84 ALA85 VAL86 TYR87 GLY88 PRO89 TRP90 GLY91 CYS92 GLY93 ALA94 CYS95 HIS96 ALA97 CYS98 ALA99 ARG100 GLY101 ARG102 GLU103 ASN104 TYR105 CYS106 THR107 ARG108 ALA109 ALA110 ASP111 LEU112 GLY113 ILE114 THR115 PRO116 PRO117 GLY118 LEU119 GLY120 SER121 PRO122 GLY123 SER124 MET125 ALA126 GLU127 TYR128 MET129 ILE130 VAL131 ASP132 SER133 ALA134 ARG135 HIS136 LEU137 VAL138 PRO139 ILE140 GLY141 ASP142 LEU143 ASP144 PRO145 VAL146 ALA147 ALA148 ALA149 PRO150 LEU151 THR152 ASP153 ALA154 GLY155 LEU156 THR157 PRO158 TYR159 HIS160 ALA161 ILE162 SER163 ARG164 VAL165 LEU166 PRO167 LEU168 LEU169 GLY170 PRO171 GLY172 SER173 THR174 ALA175 VAL176 VAL177 ILE178 GLY179 VAL180 GLY181 GLY182 LEU183 GLY184 HIS185 VAL186 GLY187 ILE188 GLN189 ILE190 LEU191 ARG192 ALA193 VAL194 SER195 ALA196 ALA197 ARG198 VAL199 ILE200 ALA201 VAL202 ASP203 LEU204 ASP205 ASP206 ASP207 ARG208 LEU209 ALA210 LEU211 ALA212 ARG213 GLU214 VAL215 GLY216 ALA217 ASP218 ALA219 ALA220 VAL221 LYS222 SER223 GLY224 ALA225 GLY226 ALA227 ALA228 ASP229 ALA230 ILE231 ARG232 GLU233 LEU234 THR235 GLY236 GLY237 GLN238 GLY239 ALA240 THR241 ALA242 VAL243 PHE244 ASP245 PHE246 VAL247 GLY248 ALA249 GLN250 SER251 THR252 ILE253 ASP254 THR255 ALA256 GLN257 GLN258 VAL259 VAL260 ALA261 VAL262 ASP263 GLY264 HIS265 ILE266 SER267 VAL268 VAL269 GLY270 ILE271 HIS272 ALA273 GLY274 ALA275 HIS276 ALA277 LYS278 VAL279 GLY280 PHE281 PHE282 MET283 ILE284 PRO285 PHE286 GLY287 ALA288 SER289 VAL290 VAL291 THR292 PRO293 TYR294 TRP295 GLY296 THR297 ARG298 SER299 GLU300 LEU301 MET302 GLU303 VAL304 VAL305 ALA306 LEU307 ALA308 ARG309 ALA310 GLY311 ARG312 LEU313 ASP314 ILE315 HIS316 THR317 GLU318 THR319 PHE320 THR321 LEU322 ASP323 GLU324 GLY325 PRO326 ALA327 ALA328 TYR329 ARG330 ARG331 LEU332 ARG333 GLU334 GLY335 SER336 ILE337 ARG338 GLY339 ARG340 GLY341 VAL342 VAL343 VAL344 PRO345
Unit 3 MET1 LYS2 ALA3 VAL4 GLN5 TYR6 THR7 GLU8 ILE9 GLY10 SER11 GLU12 PRO13 VAL14 VAL15 VAL16 ASP17 ILE18 PRO19 THR20 PRO21 THR22 PRO23 GLY24 PRO25 GLY26 GLU27 ILE28 LEU29 LEU30 LYS31 VAL32 THR33 ALA34 ALA35 GLY36 LEU37 CYS38 HIS39 SER40 ASP41 ILE42 PHE43 VAL44 MET45 ASP46 MET47 PRO48 ALA49 ALA50 GLN51 TYR52 ALA53 TYR54 GLY55 LEU56 PRO57 LEU58 THR59 LEU60 GLY61 HIS62 GLU63 GLY64 VAL65 GLY66 THR67 VAL68 ALA69 GLU70 LEU71 GLY72 GLU73 GLY74 VAL75 THR76 GLY77 PHE78 GLY79 VAL80 GLY81 ASP82 ALA83 VAL84 ALA85 VAL86 TYR87 GLY88 PRO89 TRP90 GLY91 CYS92 GLY93 ALA94 CYS95 HIS96 ALA97 CYS98 ALA99 ARG100 GLY101 ARG102 GLU103 ASN104 TYR105 CYS106 THR107 ARG108 ALA109 ALA110 ASP111 LEU112 GLY113 ILE114 THR115 PRO116 PRO117 GLY118 LEU119 GLY120 SER121 PRO122 GLY123 SER124 MET125 ALA126 GLU127 TYR128 MET129 ILE130 VAL131 ASP132 SER133 ALA134 ARG135 HIS136 LEU137 VAL138 PRO139 ILE140 GLY141 ASP142 LEU143 ASP144 PRO145 VAL146 ALA147 ALA148 ALA149 PRO150 LEU151 THR152 ASP153 ALA154 GLY155 LEU156 THR157 PRO158 TYR159 HIS160 ALA161 ILE162 SER163 ARG164 VAL165 LEU166 PRO167 LEU168 LEU169 GLY170 PRO171 GLY172 SER173 THR174 ALA175 VAL176 VAL177 ILE178 GLY179 VAL180 GLY181 GLY182 LEU183 GLY184 HIS185 VAL186 GLY187 ILE188 GLN189 ILE190 LEU191 ARG192 ALA193 VAL194 SER195 ALA196 ALA197 ARG198 VAL199 ILE200 ALA201 VAL202 ASP203 LEU204 ASP205 ASP206 ASP207 ARG208 LEU209 ALA210 LEU211 ALA212 ARG213 GLU214 VAL215 GLY216 ALA217 ASP218 ALA219 ALA220 VAL221 LYS222 SER223 GLY224 ALA225 GLY226 ALA227 ALA228 ASP229 ALA230 ILE231 ARG232 GLU233 LEU234 THR235 GLY236 GLY237 GLN238 GLY239 ALA240 THR241 ALA242 VAL243 PHE244 ASP245 PHE246 VAL247 GLY248 ALA249 GLN250 SER251 THR252 ILE253 ASP254 THR255 ALA256 GLN257 GLN258 VAL259 VAL260 ALA261 VAL262 ASP263 GLY264 HIS265 ILE266 SER267 VAL268 VAL269 GLY270 ILE271 HIS272 ALA273 GLY274 ALA275 HIS276 ALA277 LYS278 VAL279 GLY280 PHE281 PHE282 MET283 ILE284 PRO285 PHE286 GLY287 ALA288 SER289 VAL290 VAL291 THR292 PRO293 TYR294 TRP295 GLY296 THR297 ARG298 SER299 GLU300 LEU301 MET302 GLU303 VAL304 VAL305 ALA306 LEU307 ALA308 ARG309 ALA310 GLY311 ARG312 LEU313 ASP314 ILE315 HIS316 THR317 GLU318 THR319 PHE320 THR321 LEU322 ASP323 GLU324 GLY325 PRO326 ALA327 ALA328 TYR329 ARG330 ARG331 LEU332 ARG333 GLU334 GLY335 SER336 ILE337 ARG338 GLY339 ARG340 GLY341 VAL342 VAL343 VAL344 PRO345
Unit 4 MET1 LYS2 ALA3 VAL4 GLN5 TYR6 THR7 GLU8 ILE9 GLY10 SER11 GLU12 PRO13 VAL14 VAL15 VAL16 ASP17 ILE18 PRO19 THR20 PRO21 THR22 PRO23 GLY24 PRO25 GLY26 GLU27 ILE28 LEU29 LEU30 LYS31 VAL32 THR33 ALA34 ALA35 GLY36 LEU37 CYS38 HIS39 SER40 ASP41 ILE42 PHE43 VAL44 MET45 ASP46 MET47 PRO48 ALA49 ALA50 GLN51 TYR52 ALA53 TYR54 GLY55 LEU56 PRO57 LEU58 THR59 LEU60 GLY61 HIS62 GLU63 GLY64 VAL65 GLY66 THR67 VAL68 ALA69 GLU70 LEU71 GLY72 GLU73 GLY74 VAL75 THR76 GLY77 PHE78 GLY79 VAL80 GLY81 ASP82 ALA83 VAL84 ALA85 VAL86 TYR87 GLY88 PRO89 TRP90 GLY91 CYS92 GLY93 ALA94 CYS95 HIS96 ALA97 CYS98 ALA99 ARG100 GLY101 ARG102 GLU103 ASN104 TYR105 CYS106 THR107 ARG108 ALA109 ALA110 ASP111 LEU112 GLY113 ILE114 THR115 PRO116 PRO117 GLY118 LEU119 GLY120 SER121 PRO122 GLY123 SER124 MET125 ALA126 GLU127 TYR128 MET129 ILE130 VAL131 ASP132 SER133 ALA134 ARG135 HIS136 LEU137 VAL138 PRO139 ILE140 GLY141 ASP142 LEU143 ASP144 PRO145 VAL146 ALA147 ALA148 ALA149 PRO150 LEU151 THR152 ASP153 ALA154 GLY155 LEU156 THR157 PRO158 TYR159 HIS160 ALA161 ILE162 SER163 ARG164 VAL165 LEU166 PRO167 LEU168 LEU169 GLY170 PRO171 GLY172 SER173 THR174 ALA175 VAL176 VAL177 ILE178 GLY179 VAL180 GLY181 GLY182 LEU183 GLY184 HIS185 VAL186 GLY187 ILE188 GLN189 ILE190 LEU191 ARG192 ALA193 VAL194 SER195 ALA196 ALA197 ARG198 VAL199 ILE200 ALA201 VAL202 ASP203 LEU204 ASP205 ASP206 ASP207 ARG208 LEU209 ALA210 LEU211 ALA212 ARG213 GLU214 VAL215 GLY216 ALA217 ASP218 ALA219 ALA220 VAL221 LYS222 SER223 GLY224 ALA225 GLY226 ALA227 ALA228 ASP229 ALA230 ILE231 ARG232 GLU233 LEU234 THR235 GLY236 GLY237 GLN238 GLY239 ALA240 THR241 ALA242 VAL243 PHE244 ASP245 PHE246 VAL247 GLY248 ALA249 GLN250 SER251 THR252 ILE253 ASP254 THR255 ALA256 GLN257 GLN258 VAL259 VAL260 ALA261 VAL262 ASP263 GLY264 HIS265 ILE266 SER267 VAL268 VAL269 GLY270 ILE271 HIS272 ALA273 GLY274 ALA275 HIS276 ALA277 LYS278 VAL279 GLY280 PHE281 PHE282 MET283 ILE284 PRO285 PHE286 GLY287 ALA288 SER289 VAL290 VAL291 THR292 PRO293 TYR294 TRP295 GLY296 THR297 ARG298 SER299 GLU300 LEU301 MET302 GLU303 VAL304 VAL305 ALA306 LEU307 ALA308 ARG309 ALA310 GLY311 ARG312 LEU313 ASP314 ILE315 HIS316 THR317 GLU318 THR319 PHE320 THR321 LEU322 ASP323 GLU324 GLY325 PRO326 ALA327 ALA328 TYR329 ARG330 ARG331 LEU332 ARG333 GLU334 GLY335 SER336 ILE337 ARG338 GLY339 ARG340 GLY341 VAL342 VAL343 VAL344 PRO345

Ligands
Unit 5 ZN501 ZN502 NAD503 ACY504 MPD505
Unit 6 ZN501 ZN502 NAD503 ACY504 MPD505
Unit 7 ZN501 ZN502 NAD503 ACY504 MPD505
Unit 8 ZN501 ZN502 NAD503 ACY504 MPD505

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany