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Sequence, Chains, Asymmetric and Biological Units

Title CYSTAL STRUCTURE OF RHESUS MACAQUE MHC CLASS I:MAMU-A*02
Keywords ALPHA HELIX, BETA SHEET, BETA BARREL, IMMUNE RESPONSE, MHC I MEMBRANE, TRANSMEMBRANE, DISEASE MUTATION, DISULFIDE BOND, GLYCATION, GLYCOPROTEIN, IMMUNOGLOBULIN DOMAIN, PYRROLIDONE CARBOXYLIC ACID, SECRETED, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3JTT     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MHC CLASS I MAMU-A*02  A 276 2261 0
2  Protein   BETA-2-MICROGLOBULIN  B 100 830 0
3  Protein   PEPTIDE OF PROTEIN NEF  C 9 71 0
4  Protein   MHC CLASS I MAMU-A*02  D 276 2261 0
5  Protein   BETA-2-MICROGLOBULIN  E 100 830 0
6  Protein   PEPTIDE OF PROTEIN NEF  F 9 71 0
7  Protein   MHC CLASS I MAMU-A*02  G 276 2261 0
8  Protein   BETA-2-MICROGLOBULIN  H 100 830 0
9  Protein   PEPTIDE OF PROTEIN NEF  I 9 71 0
10 Water     270 0 270
total       1425 9486 270

Proteins
Unit 1 GLY1 SER2 HIS3 SER4 MET5 ARG6 TYR7 PHE8 TYR9 THR10 SER11 MET12 SER13 ARG14 PRO15 GLY16 ARG17 TRP18 GLU19 PRO20 ARG21 PHE22 ILE23 ALA24 VAL25 GLY26 TYR27 VAL28 ASP29 ASP30 THR31 GLN32 PHE33 VAL34 ARG35 PHE36 ASP37 SER38 ASP39 ALA40 ALA41 SER42 GLN43 ARG44 MET45 GLU46 PRO47 ARG48 ALA49 PRO50 TRP51 VAL52 GLU53 GLN54 GLU55 GLY56 PRO57 GLU58 TYR59 TRP60 ASP61 ARG62 GLU63 THR64 ARG65 ASN66 MET67 LYS68 ALA69 GLU70 THR71 GLN72 ASN73 ALA74 PRO75 VAL76 ASN77 LEU78 ARG79 ASN80 LEU81 ARG82 GLY83 TYR84 TYR85 ASN86 GLN87 SER88 GLU89 ALA90 GLY91 SER92 HIS93 THR94 ILE95 GLN96 ARG97 MET98 TYR99 GLY100 CYS101 ASP102 LEU103 GLY104 PRO105 ASP106 GLY107 ARG108 LEU109 LEU110 ARG111 GLY112 TYR113 HIS114 GLN115 SER116 ALA117 TYR118 ASP119 GLY120 LYS121 ASP122 TYR123 ILE124 ALA125 LEU126 ASN127 GLU128 ASP129 LEU130 ARG131 SER132 TRP133 THR134 ALA135 ALA136 ASP137 MET138 ALA139 ALA140 GLN141 ASN142 THR143 GLN144 ARG145 LYS146 TRP147 GLU148 ALA149 ALA150 GLY151 GLU152 ALA153 GLU154 GLN155 HIS156 ARG157 THR158 TYR159 LEU160 GLU161 GLY162 GLU163 CYS164 LEU165 GLU166 TRP167 LEU168 ARG169 ARG170 TYR171 LEU172 GLU173 ASN174 GLY175 LYS176 GLU177 THR178 LEU179 GLN180 ARG181 ALA182 ASP183 PRO184 PRO185 LYS186 THR187 HIS188 VAL189 THR190 HIS191 HIS192 PRO193 VAL194 SER195 ASP196 GLN197 GLU198 ALA199 THR200 LEU201 ARG202 CYS203 TRP204 ALA205 LEU206 GLY207 PHE208 TYR209 PRO210 ALA211 GLU212 ILE213 THR214 LEU215 THR216 TRP217 GLN218 ARG219 ASP220 GLY221 GLU222 ASP223 GLN224 THR225 GLN226 ASP227 THR228 GLU229 LEU230 VAL231 GLU232 THR233 ARG234 PRO235 ALA236 GLY237 ASP238 GLY239 THR240 PHE241 GLN242 LYS243 TRP244 ALA245 ALA246 VAL247 VAL248 VAL249 PRO250 SER251 GLY252 LYS253 GLU254 GLN255 ARG256 TYR257 THR258 CYS259 HIS260 VAL261 GLN262 HIS263 GLU264 GLY265 LEU266 ARG267 GLU268 PRO269 LEU270 THR271 LEU272 ARG273 TRP274 GLU275 PRO276
Unit 2 MET1 ILE2 GLN3 ARG4 THR5 PRO6 LYS7 ILE8 GLN9 VAL10 TYR11 SER12 ARG13 HIS14 PRO15 PRO16 GLU17 ASN18 GLY19 LYS20 PRO21 ASN22 PHE23 LEU24 ASN25 CYS26 TYR27 VAL28 SER29 GLY30 PHE31 HIS32 PRO33 SER34 ASP35 ILE36 GLU37 VAL38 ASP39 LEU40 LEU41 LYS42 ASN43 GLY44 GLU45 LYS46 MET47 GLY48 LYS49 VAL50 GLU51 HIS52 SER53 ASP54 LEU55 SER56 PHE57 SER58 LYS59 ASP60 TRP61 SER62 PHE63 TYR64 LEU65 LEU66 TYR67 TYR68 THR69 GLU70 PHE71 THR72 PRO73 ASN74 GLU75 LYS76 ASP77 GLU78 TYR79 ALA80 CYS81 ARG82 VAL83 ASN84 HIS85 VAL86 THR87 LEU88 SER89 GLY90 PRO91 ARG92 THR93 VAL94 LYS95 TRP96 ASP97 ARG98 ASP99 MET100
Unit 3 TYR1 THR2 SER3 GLY4 PRO5 GLY6 ILE7 ARG8 TYR9
Unit 4 GLY1 SER2 HIS3 SER4 MET5 ARG6 TYR7 PHE8 TYR9 THR10 SER11 MET12 SER13 ARG14 PRO15 GLY16 ARG17 TRP18 GLU19 PRO20 ARG21 PHE22 ILE23 ALA24 VAL25 GLY26 TYR27 VAL28 ASP29 ASP30 THR31 GLN32 PHE33 VAL34 ARG35 PHE36 ASP37 SER38 ASP39 ALA40 ALA41 SER42 GLN43 ARG44 MET45 GLU46 PRO47 ARG48 ALA49 PRO50 TRP51 VAL52 GLU53 GLN54 GLU55 GLY56 PRO57 GLU58 TYR59 TRP60 ASP61 ARG62 GLU63 THR64 ARG65 ASN66 MET67 LYS68 ALA69 GLU70 THR71 GLN72 ASN73 ALA74 PRO75 VAL76 ASN77 LEU78 ARG79 ASN80 LEU81 ARG82 GLY83 TYR84 TYR85 ASN86 GLN87 SER88 GLU89 ALA90 GLY91 SER92 HIS93 THR94 ILE95 GLN96 ARG97 MET98 TYR99 GLY100 CYS101 ASP102 LEU103 GLY104 PRO105 ASP106 GLY107 ARG108 LEU109 LEU110 ARG111 GLY112 TYR113 HIS114 GLN115 SER116 ALA117 TYR118 ASP119 GLY120 LYS121 ASP122 TYR123 ILE124 ALA125 LEU126 ASN127 GLU128 ASP129 LEU130 ARG131 SER132 TRP133 THR134 ALA135 ALA136 ASP137 MET138 ALA139 ALA140 GLN141 ASN142 THR143 GLN144 ARG145 LYS146 TRP147 GLU148 ALA149 ALA150 GLY151 GLU152 ALA153 GLU154 GLN155 HIS156 ARG157 THR158 TYR159 LEU160 GLU161 GLY162 GLU163 CYS164 LEU165 GLU166 TRP167 LEU168 ARG169 ARG170 TYR171 LEU172 GLU173 ASN174 GLY175 LYS176 GLU177 THR178 LEU179 GLN180 ARG181 ALA182 ASP183 PRO184 PRO185 LYS186 THR187 HIS188 VAL189 THR190 HIS191 HIS192 PRO193 VAL194 SER195 ASP196 GLN197 GLU198 ALA199 THR200 LEU201 ARG202 CYS203 TRP204 ALA205 LEU206 GLY207 PHE208 TYR209 PRO210 ALA211 GLU212 ILE213 THR214 LEU215 THR216 TRP217 GLN218 ARG219 ASP220 GLY221 GLU222 ASP223 GLN224 THR225 GLN226 ASP227 THR228 GLU229 LEU230 VAL231 GLU232 THR233 ARG234 PRO235 ALA236 GLY237 ASP238 GLY239 THR240 PHE241 GLN242 LYS243 TRP244 ALA245 ALA246 VAL247 VAL248 VAL249 PRO250 SER251 GLY252 LYS253 GLU254 GLN255 ARG256 TYR257 THR258 CYS259 HIS260 VAL261 GLN262 HIS263 GLU264 GLY265 LEU266 ARG267 GLU268 PRO269 LEU270 THR271 LEU272 ARG273 TRP274 GLU275 PRO276
Unit 5 MET1 ILE2 GLN3 ARG4 THR5 PRO6 LYS7 ILE8 GLN9 VAL10 TYR11 SER12 ARG13 HIS14 PRO15 PRO16 GLU17 ASN18 GLY19 LYS20 PRO21 ASN22 PHE23 LEU24 ASN25 CYS26 TYR27 VAL28 SER29 GLY30 PHE31 HIS32 PRO33 SER34 ASP35 ILE36 GLU37 VAL38 ASP39 LEU40 LEU41 LYS42 ASN43 GLY44 GLU45 LYS46 MET47 GLY48 LYS49 VAL50 GLU51 HIS52 SER53 ASP54 LEU55 SER56 PHE57 SER58 LYS59 ASP60 TRP61 SER62 PHE63 TYR64 LEU65 LEU66 TYR67 TYR68 THR69 GLU70 PHE71 THR72 PRO73 ASN74 GLU75 LYS76 ASP77 GLU78 TYR79 ALA80 CYS81 ARG82 VAL83 ASN84 HIS85 VAL86 THR87 LEU88 SER89 GLY90 PRO91 ARG92 THR93 VAL94 LYS95 TRP96 ASP97 ARG98 ASP99 MET100
Unit 6 TYR1 THR2 SER3 GLY4 PRO5 GLY6 ILE7 ARG8 TYR9
Unit 7 GLY1 SER2 HIS3 SER4 MET5 ARG6 TYR7 PHE8 TYR9 THR10 SER11 MET12 SER13 ARG14 PRO15 GLY16 ARG17 TRP18 GLU19 PRO20 ARG21 PHE22 ILE23 ALA24 VAL25 GLY26 TYR27 VAL28 ASP29 ASP30 THR31 GLN32 PHE33 VAL34 ARG35 PHE36 ASP37 SER38 ASP39 ALA40 ALA41 SER42 GLN43 ARG44 MET45 GLU46 PRO47 ARG48 ALA49 PRO50 TRP51 VAL52 GLU53 GLN54 GLU55 GLY56 PRO57 GLU58 TYR59 TRP60 ASP61 ARG62 GLU63 THR64 ARG65 ASN66 MET67 LYS68 ALA69 GLU70 THR71 GLN72 ASN73 ALA74 PRO75 VAL76 ASN77 LEU78 ARG79 ASN80 LEU81 ARG82 GLY83 TYR84 TYR85 ASN86 GLN87 SER88 GLU89 ALA90 GLY91 SER92 HIS93 THR94 ILE95 GLN96 ARG97 MET98 TYR99 GLY100 CYS101 ASP102 LEU103 GLY104 PRO105 ASP106 GLY107 ARG108 LEU109 LEU110 ARG111 GLY112 TYR113 HIS114 GLN115 SER116 ALA117 TYR118 ASP119 GLY120 LYS121 ASP122 TYR123 ILE124 ALA125 LEU126 ASN127 GLU128 ASP129 LEU130 ARG131 SER132 TRP133 THR134 ALA135 ALA136 ASP137 MET138 ALA139 ALA140 GLN141 ASN142 THR143 GLN144 ARG145 LYS146 TRP147 GLU148 ALA149 ALA150 GLY151 GLU152 ALA153 GLU154 GLN155 HIS156 ARG157 THR158 TYR159 LEU160 GLU161 GLY162 GLU163 CYS164 LEU165 GLU166 TRP167 LEU168 ARG169 ARG170 TYR171 LEU172 GLU173 ASN174 GLY175 LYS176 GLU177 THR178 LEU179 GLN180 ARG181 ALA182 ASP183 PRO184 PRO185 LYS186 THR187 HIS188 VAL189 THR190 HIS191 HIS192 PRO193 VAL194 SER195 ASP196 GLN197 GLU198 ALA199 THR200 LEU201 ARG202 CYS203 TRP204 ALA205 LEU206 GLY207 PHE208 TYR209 PRO210 ALA211 GLU212 ILE213 THR214 LEU215 THR216 TRP217 GLN218 ARG219 ASP220 GLY221 GLU222 ASP223 GLN224 THR225 GLN226 ASP227 THR228 GLU229 LEU230 VAL231 GLU232 THR233 ARG234 PRO235 ALA236 GLY237 ASP238 GLY239 THR240 PHE241 GLN242 LYS243 TRP244 ALA245 ALA246 VAL247 VAL248 VAL249 PRO250 SER251 GLY252 LYS253 GLU254 GLN255 ARG256 TYR257 THR258 CYS259 HIS260 VAL261 GLN262 HIS263 GLU264 GLY265 LEU266 ARG267 GLU268 PRO269 LEU270 THR271 LEU272 ARG273 TRP274 GLU275 PRO276
Unit 8 MET1 ILE2 GLN3 ARG4 THR5 PRO6 LYS7 ILE8 GLN9 VAL10 TYR11 SER12 ARG13 HIS14 PRO15 PRO16 GLU17 ASN18 GLY19 LYS20 PRO21 ASN22 PHE23 LEU24 ASN25 CYS26 TYR27 VAL28 SER29 GLY30 PHE31 HIS32 PRO33 SER34 ASP35 ILE36 GLU37 VAL38 ASP39 LEU40 LEU41 LYS42 ASN43 GLY44 GLU45 LYS46 MET47 GLY48 LYS49 VAL50 GLU51 HIS52 SER53 ASP54 LEU55 SER56 PHE57 SER58 LYS59 ASP60 TRP61 SER62 PHE63 TYR64 LEU65 LEU66 TYR67 TYR68 THR69 GLU70 PHE71 THR72 PRO73 ASN74 GLU75 LYS76 ASP77 GLU78 TYR79 ALA80 CYS81 ARG82 VAL83 ASN84 HIS85 VAL86 THR87 LEU88 SER89 GLY90 PRO91 ARG92 THR93 VAL94 LYS95 TRP96 ASP97 ARG98 ASP99 MET100
Unit 9 TYR1 THR2 SER3 GLY4 PRO5 GLY6 ILE7 ARG8 TYR9

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany