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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF TYPE I 3-DEHYDROQUINATE DEHYDRATASE (AR CLOSTRIDIUM DIFFICILE WITH COVALENT REACTION INTERMEDIATE
Keywords TYPE I 3-DEHYDROQUINATE DEHYDRATASE, AROD, COVALENT REACTION INTERMEDIATE, AMINO-ACID BIOSYNTHESIS, AROMATIC AMINO ACID BIOSYNTHESIS, LYASE, SCHIFF BASE, STRUCTURAL GENOMICS, CENT STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3JS3     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   3-DEHYDROQUINATE DEHYDRATASE  A 253 2008 0
2  Protein   3-DEHYDROQUINATE DEHYDRATASE  B 253 2008 0
3  Protein   3-DEHYDROQUINATE DEHYDRATASE  C 253 2008 0
4  Protein   3-DEHYDROQUINATE DEHYDRATASE  D 253 2008 0
5  Ligand   3-DEHYDROQUINATE DEHYDRATASE  A 1 0 11
6  Ligand   3-DEHYDROQUINATE DEHYDRATASE  B 1 0 11
7  Ligand   3-DEHYDROQUINATE DEHYDRATASE  C 1 0 11
8  Ligand   3-DEHYDROQUINATE DEHYDRATASE  D 1 0 11
9 Water     318 0 318
total       1334 8032 362

Proteins
Unit 1 MET1 LYS2 ARG3 LYS4 VAL5 GLN6 VAL7 LYS8 ASN9 ILE10 THR11 ILE12 GLY13 GLU14 GLY15 ARG16 PRO17 LYS18 ILE19 CYS20 VAL21 PRO22 ILE23 ILE24 GLY25 LYS26 ASN27 LYS28 LYS29 ASP30 ILE31 ILE32 LYS33 GLU34 ALA35 LYS36 GLU37 LEU38 LYS39 ASP40 ALA41 CYS42 LEU43 ASP44 ILE45 ILE46 GLU47 TRP48 ARG49 VAL50 ASP51 PHE52 PHE53 GLU54 ASN55 VAL56 GLU57 ASN58 ILE59 LYS60 GLU61 VAL62 LYS63 GLU64 VAL65 LEU66 TYR67 GLU68 LEU69 ARG70 SER71 TYR72 ILE73 HIS74 ASP75 ILE76 PRO77 LEU78 LEU79 PHE80 THR81 PHE82 ARG83 SER84 VAL85 VAL86 GLU87 GLY88 GLY89 GLU90 LYS91 LEU92 ILE93 SER94 ARG95 ASP96 TYR97 TYR98 THR99 THR100 LEU101 ASN102 LYS103 GLU104 ILE105 SER106 ASN107 THR108 GLY109 LEU110 VAL111 ASP112 LEU113 ILE114 ASP115 VAL116 GLU117 LEU118 PHE119 MET120 GLY121 ASP122 GLU123 VAL124 ILE125 ASP126 GLU127 VAL128 VAL129 ASN130 PHE131 ALA132 HIS133 LYS134 LYS135 GLU136 VAL137 LYS138 VAL139 ILE140 ILE141 SER142 ASN143 HIS144 ASP145 PHE146 ASN147 LYS148 THR149 PRO150 LYS151 LYS152 GLU153 GLU154 ILE155 VAL156 SER157 ARG158 LEU159 CYS160 ARG161 MET162 GLN163 GLU164 LEU165 GLY166 ALA167 ASP168 LEU169 PRO170 LYS171 ILE172 ALA173 VAL174 MET175 PRO176 GLN177 ASN178 GLU179 LYS180 ASP181 VAL182 LEU183 VAL184 LEU185 LEU186 GLU187 ALA188 THR189 ASN190 GLU191 MET192 PHE193 LYS194 ILE195 TYR196 ALA197 ASP198 ARG199 PRO200 ILE201 ILE202 THR203 MET204 SER205 MET206 SER207 GLY208 MET209 GLY210 VAL211 ILE212 SER213 ARG214 LEU215 CYS216 GLY217 GLU218 ILE219 PHE220 GLY221 SER222 ALA223 LEU224 THR225 PHE226 GLY227 ALA228 ALA229 LYS230 SER231 VAL232 SER233 ALA234 PRO235 GLY236 GLN237 ILE238 SER239 PHE240 LYS241 GLU242 LEU243 ASN244 SER245 VAL246 LEU247 ASN248 LEU249 LEU250 HIS251 LYS252 SER253
Unit 2 MET1 LYS2 ARG3 LYS4 VAL5 GLN6 VAL7 LYS8 ASN9 ILE10 THR11 ILE12 GLY13 GLU14 GLY15 ARG16 PRO17 LYS18 ILE19 CYS20 VAL21 PRO22 ILE23 ILE24 GLY25 LYS26 ASN27 LYS28 LYS29 ASP30 ILE31 ILE32 LYS33 GLU34 ALA35 LYS36 GLU37 LEU38 LYS39 ASP40 ALA41 CYS42 LEU43 ASP44 ILE45 ILE46 GLU47 TRP48 ARG49 VAL50 ASP51 PHE52 PHE53 GLU54 ASN55 VAL56 GLU57 ASN58 ILE59 LYS60 GLU61 VAL62 LYS63 GLU64 VAL65 LEU66 TYR67 GLU68 LEU69 ARG70 SER71 TYR72 ILE73 HIS74 ASP75 ILE76 PRO77 LEU78 LEU79 PHE80 THR81 PHE82 ARG83 SER84 VAL85 VAL86 GLU87 GLY88 GLY89 GLU90 LYS91 LEU92 ILE93 SER94 ARG95 ASP96 TYR97 TYR98 THR99 THR100 LEU101 ASN102 LYS103 GLU104 ILE105 SER106 ASN107 THR108 GLY109 LEU110 VAL111 ASP112 LEU113 ILE114 ASP115 VAL116 GLU117 LEU118 PHE119 MET120 GLY121 ASP122 GLU123 VAL124 ILE125 ASP126 GLU127 VAL128 VAL129 ASN130 PHE131 ALA132 HIS133 LYS134 LYS135 GLU136 VAL137 LYS138 VAL139 ILE140 ILE141 SER142 ASN143 HIS144 ASP145 PHE146 ASN147 LYS148 THR149 PRO150 LYS151 LYS152 GLU153 GLU154 ILE155 VAL156 SER157 ARG158 LEU159 CYS160 ARG161 MET162 GLN163 GLU164 LEU165 GLY166 ALA167 ASP168 LEU169 PRO170 LYS171 ILE172 ALA173 VAL174 MET175 PRO176 GLN177 ASN178 GLU179 LYS180 ASP181 VAL182 LEU183 VAL184 LEU185 LEU186 GLU187 ALA188 THR189 ASN190 GLU191 MET192 PHE193 LYS194 ILE195 TYR196 ALA197 ASP198 ARG199 PRO200 ILE201 ILE202 THR203 MET204 SER205 MET206 SER207 GLY208 MET209 GLY210 VAL211 ILE212 SER213 ARG214 LEU215 CYS216 GLY217 GLU218 ILE219 PHE220 GLY221 SER222 ALA223 LEU224 THR225 PHE226 GLY227 ALA228 ALA229 LYS230 SER231 VAL232 SER233 ALA234 PRO235 GLY236 GLN237 ILE238 SER239 PHE240 LYS241 GLU242 LEU243 ASN244 SER245 VAL246 LEU247 ASN248 LEU249 LEU250 HIS251 LYS252 SER253
Unit 3 MET1 LYS2 ARG3 LYS4 VAL5 GLN6 VAL7 LYS8 ASN9 ILE10 THR11 ILE12 GLY13 GLU14 GLY15 ARG16 PRO17 LYS18 ILE19 CYS20 VAL21 PRO22 ILE23 ILE24 GLY25 LYS26 ASN27 LYS28 LYS29 ASP30 ILE31 ILE32 LYS33 GLU34 ALA35 LYS36 GLU37 LEU38 LYS39 ASP40 ALA41 CYS42 LEU43 ASP44 ILE45 ILE46 GLU47 TRP48 ARG49 VAL50 ASP51 PHE52 PHE53 GLU54 ASN55 VAL56 GLU57 ASN58 ILE59 LYS60 GLU61 VAL62 LYS63 GLU64 VAL65 LEU66 TYR67 GLU68 LEU69 ARG70 SER71 TYR72 ILE73 HIS74 ASP75 ILE76 PRO77 LEU78 LEU79 PHE80 THR81 PHE82 ARG83 SER84 VAL85 VAL86 GLU87 GLY88 GLY89 GLU90 LYS91 LEU92 ILE93 SER94 ARG95 ASP96 TYR97 TYR98 THR99 THR100 LEU101 ASN102 LYS103 GLU104 ILE105 SER106 ASN107 THR108 GLY109 LEU110 VAL111 ASP112 LEU113 ILE114 ASP115 VAL116 GLU117 LEU118 PHE119 MET120 GLY121 ASP122 GLU123 VAL124 ILE125 ASP126 GLU127 VAL128 VAL129 ASN130 PHE131 ALA132 HIS133 LYS134 LYS135 GLU136 VAL137 LYS138 VAL139 ILE140 ILE141 SER142 ASN143 HIS144 ASP145 PHE146 ASN147 LYS148 THR149 PRO150 LYS151 LYS152 GLU153 GLU154 ILE155 VAL156 SER157 ARG158 LEU159 CYS160 ARG161 MET162 GLN163 GLU164 LEU165 GLY166 ALA167 ASP168 LEU169 PRO170 LYS171 ILE172 ALA173 VAL174 MET175 PRO176 GLN177 ASN178 GLU179 LYS180 ASP181 VAL182 LEU183 VAL184 LEU185 LEU186 GLU187 ALA188 THR189 ASN190 GLU191 MET192 PHE193 LYS194 ILE195 TYR196 ALA197 ASP198 ARG199 PRO200 ILE201 ILE202 THR203 MET204 SER205 MET206 SER207 GLY208 MET209 GLY210 VAL211 ILE212 SER213 ARG214 LEU215 CYS216 GLY217 GLU218 ILE219 PHE220 GLY221 SER222 ALA223 LEU224 THR225 PHE226 GLY227 ALA228 ALA229 LYS230 SER231 VAL232 SER233 ALA234 PRO235 GLY236 GLN237 ILE238 SER239 PHE240 LYS241 GLU242 LEU243 ASN244 SER245 VAL246 LEU247 ASN248 LEU249 LEU250 HIS251 LYS252 SER253
Unit 4 MET1 LYS2 ARG3 LYS4 VAL5 GLN6 VAL7 LYS8 ASN9 ILE10 THR11 ILE12 GLY13 GLU14 GLY15 ARG16 PRO17 LYS18 ILE19 CYS20 VAL21 PRO22 ILE23 ILE24 GLY25 LYS26 ASN27 LYS28 LYS29 ASP30 ILE31 ILE32 LYS33 GLU34 ALA35 LYS36 GLU37 LEU38 LYS39 ASP40 ALA41 CYS42 LEU43 ASP44 ILE45 ILE46 GLU47 TRP48 ARG49 VAL50 ASP51 PHE52 PHE53 GLU54 ASN55 VAL56 GLU57 ASN58 ILE59 LYS60 GLU61 VAL62 LYS63 GLU64 VAL65 LEU66 TYR67 GLU68 LEU69 ARG70 SER71 TYR72 ILE73 HIS74 ASP75 ILE76 PRO77 LEU78 LEU79 PHE80 THR81 PHE82 ARG83 SER84 VAL85 VAL86 GLU87 GLY88 GLY89 GLU90 LYS91 LEU92 ILE93 SER94 ARG95 ASP96 TYR97 TYR98 THR99 THR100 LEU101 ASN102 LYS103 GLU104 ILE105 SER106 ASN107 THR108 GLY109 LEU110 VAL111 ASP112 LEU113 ILE114 ASP115 VAL116 GLU117 LEU118 PHE119 MET120 GLY121 ASP122 GLU123 VAL124 ILE125 ASP126 GLU127 VAL128 VAL129 ASN130 PHE131 ALA132 HIS133 LYS134 LYS135 GLU136 VAL137 LYS138 VAL139 ILE140 ILE141 SER142 ASN143 HIS144 ASP145 PHE146 ASN147 LYS148 THR149 PRO150 LYS151 LYS152 GLU153 GLU154 ILE155 VAL156 SER157 ARG158 LEU159 CYS160 ARG161 MET162 GLN163 GLU164 LEU165 GLY166 ALA167 ASP168 LEU169 PRO170 LYS171 ILE172 ALA173 VAL174 MET175 PRO176 GLN177 ASN178 GLU179 LYS180 ASP181 VAL182 LEU183 VAL184 LEU185 LEU186 GLU187 ALA188 THR189 ASN190 GLU191 MET192 PHE193 LYS194 ILE195 TYR196 ALA197 ASP198 ARG199 PRO200 ILE201 ILE202 THR203 MET204 SER205 MET206 SER207 GLY208 MET209 GLY210 VAL211 ILE212 SER213 ARG214 LEU215 CYS216 GLY217 GLU218 ILE219 PHE220 GLY221 SER222 ALA223 LEU224 THR225 PHE226 GLY227 ALA228 ALA229 LYS230 SER231 VAL232 SER233 ALA234 PRO235 GLY236 GLN237 ILE238 SER239 PHE240 LYS241 GLU242 LEU243 ASN244 SER245 VAL246 LEU247 ASN248 LEU249 LEU250 HIS251 LYS252 SER253

Ligands
Unit 5 DHS301
Unit 6 DHS301
Unit 7 DHS301
Unit 8 DHS301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany