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Sequence, Chains, Asymmetric and Biological Units

Title NUP84-NUP145C-SEC13 EDGE ELEMENT OF THE NPC LATTICE
Keywords PROTEIN COMPLEX, CYTOPLASMIC VESICLE, ENDOPLASMIC RETICULUM, TRANSPORT, MEMBRANE, MRNA TRANSPORT, NUCLEAR PORE COMPLEX, PROTEIN TRANSPORT, TRANSLOCATION, TRANSPORT, WD REPEAT, AUTOCATALYTIC CLEAVAGE, HYDROLASE, PHOSPHOPROTEIN, TRANSPOR PROTEIN, STRUCTURAL PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3JRO     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FUSION PROTEIN OF PROTEIN TRANSPORT PROTEIN SEC13 NUCLEOPORIN NUP145  A 701 5583 40
2  Protein   NUCLEOPORIN NUP84  C 379 2992 56
total       1080 8575 96
Proteins
Unit 1 HIS8 ASN9 GLU10 LEU11 ILE12 HIS13 ASP14 ALA15 VAL16 LEU17 ASP18 TYR19 TYR20 GLY21 LYS22 ARG23 LEU24 ALA25 THR26 CYS27 SER28 SER29 ASP30 LYS31 THR32 ILE33 LYS34 ILE35 PHE36 GLU37 VAL38 GLU39 GLY40 GLU41 THR42 HIS43 LYS44 LEU45 ILE46 ASP47 THR48 LEU49 THR50 GLY51 HIS52 GLU53 GLY54 PRO55 VAL56 TRP57 ARG58 VAL59 ASP60 TRP61 ALA62 HIS63 PRO64 LYS65 PHE66 GLY67 THR68 ILE69 LEU70 ALA71 SER72 CYS73 SER74 TYR75 ASP76 GLY77 LYS78 VAL79 LEU80 ILE81 TRP82 LYS83 GLU84 GLU85 ASN86 GLY87 ARG88 TRP89 SER90 GLN91 ILE92 ALA93 VAL94 HIS95 ALA96 VAL97 HIS98 SER99 ALA100 SER101 VAL102 ASN103 SER104 VAL105 GLN106 TRP107 ALA108 PRO109 HIS110 GLU111 TYR112 GLY113 PRO114 LEU115 LEU116 LEU117 VAL118 ALA119 SER120 SER121 ASP122 GLY123 LYS124 VAL125 SER126 VAL127 VAL128 GLU129 PHE130 LYS131 GLU132 ASN133 GLY134 THR135 THR136 SER137 PRO138 ILE139 ILE140 ILE141 ASP142 ALA143 HIS144 ALA145 ILE146 GLY147 VAL148 ASN149 SER150 ALA151 SER152 TRP153 ALA154 PRO155 ALA156 THR157 THR167 LYS168 GLU169 SER170 ARG171 LYS172 PHE173 VAL174 THR175 GLY176 GLY177 ALA178 ASP179 ASN180 LEU181 VAL182 LYS183 ILE184 TRP185 LYS186 TYR187 ASN188 SER189 ASP190 ALA191 GLN192 THR193 TYR194 VAL195 LEU196 GLU197 SER198 THR199 LEU200 GLU201 GLY202 HIS203 SER204 ASP205 TRP206 VAL207 ARG208 ASP209 VAL210 ALA211 TRP212 SER213 PRO214 THR215 VAL216 LEU217 LEU218 ARG219 SER220 TYR221 LEU222 ALA223 SER224 VAL225 SER226 GLN227 ASP228 ARG229 THR230 CYS231 ILE232 ILE233 TRP234 THR235 GLN236 ASP237 ASN238 GLU239 GLN240 GLY241 PRO242 TRP243 LYS244 LYS245 THR246 LEU247 LEU248 LYS249 GLU250 GLU251 LYS252 PHE253 PRO254 ASP255 VAL256 LEU257 TRP258 ARG259 ALA260 SER261 TRP262 SER263 LEU264 SER265 GLY266 ASN267 VAL268 LEU269 ALA270 LEU271 SER272 GLY273 GLY274 ASP275 ASN276 LYS277 VAL278 THR279 LEU280 TRP281 LYS282 GLU283 ASN284 LEU285 GLU286 GLY287 LYS288 TRP289 GLU290 PRO291 ALA292 GLY293 GLU294 VAL295 HIS296 ILE1133 ASP1134 ASN1135 ALA1136 LYS1137 LEU1138 ILE1139 MSE1140 LYS1141 GLU1142 ARG1143 ARG1144 PHE1145 THR1146 ALA1147 SER1148 TYR1149 THR1150 PHE1151 ALA1152 LYS1153 PHE1154 SER1155 THR1156 GLY1157 SER1158 MSE1159 LEU1160 LEU1161 THR1162 LYS1163 ASP1164 ILE1165 VAL1166 GLY1167 LYS1168 SER1169 GLY1170 VAL1171 SER1172 ILE1173 LYS1174 ARG1175 LEU1176 PRO1177 THR1178 GLU1179 LEU1180 GLN1181 ARG1182 LYS1183 PHE1184 LEU1185 PHE1186 ASP1187 ASP1188 VAL1189 TYR1190 LEU1191 ASP1192 LYS1193 GLU1194 ILE1195 GLU1196 LYS1197 VAL1198 THR1199 ILE1200 GLU1201 ALA1202 ARG1203 LYS1204 SER1205 ASN1206 PRO1207 TYR1208 PRO1209 GLN1210 ILE1211 SER1212 GLU1213 SER1214 SER1215 LEU1216 LEU1217 PHE1218 LYS1219 ASP1220 ALA1221 LEU1222 ASP1223 TYR1224 MSE1225 GLU1226 LYS1227 THR1228 SER1229 SER1230 ASP1231 TYR1232 ASN1233 LEU1234 TRP1235 LYS1236 LEU1237 SER1238 SER1239 ILE1240 LEU1241 PHE1242 ASP1243 PRO1244 VAL1245 SER1246 TYR1247 PRO1248 TYR1249 LYS1250 THR1251 ASP1252 ASN1253 ASP1254 GLN1255 VAL1256 LYS1257 MSE1258 ALA1259 LEU1260 LEU1261 LYS1262 LYS1263 GLU1264 ARG1265 HIS1266 CYS1267 ARG1268 LEU1269 THR1270 SER1271 TRP1272 ILE1273 VAL1274 SER1275 GLN1276 ILE1277 GLY1278 PRO1279 GLU1280 ILE1281 GLU1282 GLU1283 LYS1284 ILE1285 ARG1286 ASN1287 SER1288 SER1289 ASN1290 GLU1291 ILE1292 GLU1293 GLN1294 ILE1295 PHE1296 LEU1297 TYR1298 LEU1299 LEU1300 LEU1301 ASN1302 ASP1303 VAL1304 VAL1305 ARG1306 ALA1307 SER1308 LYS1309 LEU1310 ALA1311 ILE1312 GLU1313 SER1314 LYS1315 ASN1316 GLY1317 HIS1318 LEU1319 SER1320 VAL1321 LEU1322 ILE1323 SER1324 TYR1325 LEU1326 GLY1327 SER1328 ASN1329 ASP1330 PRO1331 ARG1332 ILE1333 ARG1334 ASP1335 LEU1336 ALA1337 GLU1338 LEU1339 GLN1340 LEU1341 GLN1342 LYS1343 TRP1344 SER1345 THR1346 GLY1347 GLY1348 CYS1349 SER1350 ILE1351 ASP1352 LYS1353 ASN1354 ILE1355 SER1356 LYS1357 ILE1358 TYR1359 LYS1360 LEU1361 LEU1362 SER1363 GLY1364 SER1365 PRO1366 PHE1367 GLU1368 GLY1369 LEU1370 PHE1371 SER1372 LEU1373 LYS1374 GLU1375 LEU1376 GLU1377 SER1378 GLU1379 PHE1380 SER1381 TRP1382 LEU1383 CYS1384 LEU1385 LEU1386 ASN1387 LEU1388 THR1389 LEU1390 CYS1391 TYR1392 GLY1393 GLN1394 ILE1395 ASP1396 GLU1397 TYR1398 SER1399 LEU1400 GLU1401 SER1402 LEU1403 VAL1404 GLN1405 SER1406 HIS1407 LEU1408 ASP1409 LYS1410 PHE1411 SER1412 LEU1413 PRO1414 TYR1415 ASP1416 ASP1417 PRO1418 ILE1419 GLY1420 VAL1421 ILE1422 PHE1423 GLN1424 LEU1425 TYR1426 ALA1427 ALA1428 ASN1429 GLU1430 ASN1431 THR1432 GLU1433 LYS1434 LEU1435 TYR1436 LYS1437 GLU1438 VAL1439 ARG1440 GLN1441 ARG1442 THR1443 ASN1444 ALA1445 LEU1446 ASP1447 VAL1448 GLN1449 PHE1450 CYS1451 TRP1452 TYR1453 LEU1454 ILE1455 GLN1456 THR1457 LEU1458 ARG1459 PHE1460 ASN1461 GLY1462 THR1463 ARG1464 VAL1465 PHE1466 SER1467 LYS1468 GLU1469 THR1470 SER1471 ASP1472 GLU1473 ALA1474 THR1475 PHE1476 ALA1477 PHE1478 ALA1479 ALA1480 GLN1481 LEU1482 GLU1483 PHE1484 ALA1485 GLN1486 LEU1487 HIS1488 GLY1489 HIS1490 SER1491 LEU1492 PHE1493 VAL1494 SER1495 CYS1496 PHE1497 LEU1498 ASN1499 ASP1500 ASP1501 LYS1502 ALA1503 ALA1504 GLU1505 ASP1506 THR1507 ILE1508 LYS1509 ARG1510 LEU1511 VAL1512 MSE1513 ARG1514 GLU1515 ILE1516 THR1517 LEU1518 LEU1519 ARG1520 ALA1521 SER1522 THR1523 ASN1524 ASP1525 HIS1526 ILE1527 LEU1528 ASN1529 ARG1530 LEU1531 LYS1532 ILE1533 PRO1534 SER1535 GLN1536 LEU1537 ILE1538 PHE1539 ASN1540 ALA1541 GLN1542 ALA1543 LEU1544 LYS1545 ASP1546 ARG1547 TYR1548 GLU1549 GLY1550 ASN1551 TYR1552 LEU1553
Unit 2 ILE33 ASP34 PRO35 PHE36 ASN37 ILE38 ILE39 ARG40 GLU41 PHE42 ARG43 SER44 ALA45 ALA46 GLY47 GLN48 LEU49 ALA50 LEU51 ASP52 LEU53 ALA54 ASN55 SER56 GLY57 ASP58 GLU59 SER60 ASN61 VAL62 ILE63 SER64 SER65 LYS66 ASP67 TRP68 GLU69 LEU70 GLU71 ALA72 ARG73 PHE74 TRP75 HIS76 LEU77 VAL78 GLU79 LEU80 LEU81 LEU82 VAL83 PHE84 ARG85 ASN86 ALA87 ASP88 LEU89 ASP90 LEU91 ASP92 GLU93 MSE94 GLU95 LEU96 HIS97 PRO98 TYR99 ASN100 SER101 ARG102 GLY103 LEU104 PHE105 GLU106 LYS107 LYS108 LEU109 MSE110 GLN111 ASP112 ASN113 LYS114 GLN115 LEU116 TYR117 GLN118 ILE119 TRP120 ILE121 VAL122 MSE123 VAL124 TRP125 LEU126 LYS127 GLU128 ASN129 THR130 TYR131 VAL132 MSE133 GLU134 ARG135 PRO136 PRO140 THR141 SER142 LYS143 TRP144 LEU145 ASN146 SER147 ILE148 THR149 SER150 GLY151 GLY152 LEU153 LYS154 SER155 CYS156 ASP157 LEU158 ASP159 PHE160 PRO161 LEU162 ARG163 GLU164 ASN165 THR166 ASN167 VAL168 LEU169 ASP170 VAL171 LYS172 ASP173 LYS174 GLU175 GLU176 ASP177 HIS178 ILE179 PHE180 PHE181 LYS182 TYR183 ILE184 TYR185 GLU186 LEU187 ILE188 LEU189 ALA190 GLY191 ALA192 ILE193 ASP194 GLU195 ALA196 LEU197 GLU198 GLU199 ALA200 LYS201 LEU202 SER203 ASP204 ASN205 ILE206 SER207 ILE208 CYS209 MSE210 ILE211 LEU212 CYS213 GLY214 ILE215 GLN216 GLU217 TYR218 LEU219 ASN220 PRO221 VAL222 ILE223 ASP224 THR225 GLN226 ILE227 ALA228 ASN229 GLU230 PHE231 ASN232 THR233 GLN234 GLN235 GLY236 ILE237 LYS238 LYS239 HIS240 SER241 LEU242 TRP243 ARG244 ARG245 THR246 VAL247 TYR248 SER249 LEU250 SER251 GLN252 GLN253 ALA254 GLY255 LEU256 ASP257 PRO258 TYR259 GLU260 ARG261 ALA262 ILE263 TYR264 SER265 TYR266 LEU267 SER268 GLY269 ALA270 ILE271 PRO272 ASN273 GLN274 GLU275 VAL276 LEU277 GLN278 TYR279 SER280 ASP281 TRP282 GLU283 SER284 ASP285 LEU286 HIS287 ILE288 HIS289 LEU290 ASN291 GLN292 ILE293 LEU294 GLN295 THR296 GLU297 ILE298 GLU299 ASN300 TYR301 LEU302 LEU303 GLU304 ASN305 ASN306 GLN307 VAL308 GLY309 THR310 ASP311 GLU312 LEU313 ILE314 LEU315 PRO316 LEU317 PRO318 SER319 HIS320 ALA321 LEU322 THR323 VAL324 GLN325 GLU326 VAL327 LEU328 ASN329 ARG330 VAL331 ALA332 SER333 ARG334 HIS335 PRO336 SER337 GLU338 SER339 GLU340 HIS341 PRO342 ILE343 ARG344 VAL345 LEU346 MSE347 ALA348 SER349 VAL350 ILE351 LEU352 ASP353 SER354 LEU355 PRO356 SER357 VAL358 ILE359 HIS360 SER361 SER362 VAL363 GLU364 MSE365 LEU366 LEU367 ASP368 VAL369 VAL370 ASP381 LYS382 PRO383 TYR384 LEU385 LEU386 ARG387 ILE388 VAL389 THR390 HIS391 LEU392 ALA393 ILE394 CYS395 LEU396 ASP397 ILE398 ILE399 ASN400 PRO401 GLY402 SER403 VAL404 GLU405 GLU406 VAL407 ASP408 LYS409 SER410 LYS411 LEU412 ILE413 THR414 THR415 TYR416 ILE417 SER418 LEU419 LEU420 LYS421 LEU422 GLN423 GLY424
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany