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Sequence, Chains, Asymmetric and Biological Units

Title MDFF MODEL OF THE VINCULIN TAIL DOMAIN BOUND TO F-ACTIN
Keywords CYTOSKELETON, ADHESION, STRUCTURAL PROTEIN
Experiment ELECTRON MICROSCOPY
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3JBI     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ACTIN, ALPHA SKELETAL MUSCLE  A 367 2861 0
2  Protein   ACTIN, ALPHA SKELETAL MUSCLE  B 367 2861 0
3  Protein   VINCULIN  V 131 999 0
4  Ligand   ACTIN, ALPHA SKELETAL MUSCLE  A 2 0 28
5  Ligand   ACTIN, ALPHA SKELETAL MUSCLE  B 2 0 28
total       869 6721 56
Proteins
Unit 1 THR5 THR6 ALA7 LEU8 VAL9 CYS10 ASP11 ASN12 GLY13 SER14 GLY15 LEU16 VAL17 LYS18 ALA19 GLY20 PHE21 ALA22 GLY23 ASP24 ASP25 ALA26 PRO27 ARG28 ALA29 VAL30 PHE31 PRO32 SER33 ILE34 VAL35 GLY36 ARG37 PRO38 ARG39 HIS40 GLN41 GLY42 VAL43 MET44 VAL45 GLY46 MET47 GLY48 GLN49 LYS50 ASP51 SER52 TYR53 VAL54 GLY55 ASP56 GLU57 ALA58 GLN59 SER60 LYS61 ARG62 GLY63 ILE64 LEU65 THR66 LEU67 LYS68 TYR69 PRO70 ILE71 GLU72 HIS73 GLY74 ILE75 ILE76 THR77 ASN78 TRP79 ASP80 ASP81 MET82 GLU83 LYS84 ILE85 TRP86 HIS87 HIS88 THR89 PHE90 TYR91 ASN92 GLU93 LEU94 ARG95 VAL96 ALA97 PRO98 GLU99 GLU100 HIS101 PRO102 THR103 LEU104 LEU105 THR106 GLU107 ALA108 PRO109 LEU110 ASN111 PRO112 LYS113 ALA114 ASN115 ARG116 GLU117 LYS118 MET119 THR120 GLN121 ILE122 MET123 PHE124 GLU125 THR126 PHE127 ASN128 VAL129 PRO130 ALA131 MET132 TYR133 VAL134 ALA135 ILE136 GLN137 ALA138 VAL139 LEU140 SER141 LEU142 TYR143 ALA144 SER145 GLY146 ARG147 THR148 THR149 GLY150 ILE151 VAL152 LEU153 ASP154 SER155 GLY156 ASP157 GLY158 VAL159 THR160 HIS161 ASN162 VAL163 PRO164 ILE165 TYR166 GLU167 GLY168 TYR169 ALA170 LEU171 PRO172 HIS173 ALA174 ILE175 MET176 ARG177 LEU178 ASP179 LEU180 ALA181 GLY182 ARG183 ASP184 LEU185 THR186 ASP187 TYR188 LEU189 MET190 LYS191 ILE192 LEU193 THR194 GLU195 ARG196 GLY197 TYR198 SER199 PHE200 VAL201 THR202 THR203 ALA204 GLU205 ARG206 GLU207 ILE208 VAL209 ARG210 ASP211 ILE212 LYS213 GLU214 LYS215 LEU216 CYS217 TYR218 VAL219 ALA220 LEU221 ASP222 PHE223 GLU224 ASN225 GLU226 MET227 ALA228 THR229 ALA230 ALA231 SER232 SER233 SER234 SER235 LEU236 GLU237 LYS238 SER239 TYR240 GLU241 LEU242 PRO243 ASP244 GLY245 GLN246 VAL247 ILE248 THR249 ILE250 GLY251 ASN252 GLU253 ARG254 PHE255 ARG256 CYS257 PRO258 GLU259 THR260 LEU261 PHE262 GLN263 PRO264 SER265 PHE266 ILE267 GLY268 MET269 GLU270 SER271 ALA272 GLY273 ILE274 HIS275 GLU276 THR277 THR278 TYR279 ASN280 SER281 ILE282 MET283 LYS284 CYS285 ASP286 ILE287 ASP288 ILE289 ARG290 LYS291 ASP292 LEU293 TYR294 ALA295 ASN296 ASN297 VAL298 MET299 SER300 GLY301 GLY302 THR303 THR304 MET305 TYR306 PRO307 GLY308 ILE309 ALA310 ASP311 ARG312 MET313 GLN314 LYS315 GLU316 ILE317 THR318 ALA319 LEU320 ALA321 PRO322 SER323 THR324 MET325 LYS326 ILE327 LYS328 ILE329 ILE330 ALA331 PRO332 PRO333 GLU334 ARG335 LYS336 TYR337 SER338 VAL339 TRP340 ILE341 GLY342 GLY343 SER344 ILE345 LEU346 ALA347 SER348 LEU349 SER350 THR351 PHE352 GLN353 GLN354 MET355 TRP356 ILE357 THR358 LYS359 GLN360 GLU361 TYR362 ASP363 GLU364 ALA365 GLY366 PRO367 SER368 ILE369 VAL370 HIS371
Unit 2 THR5 THR6 ALA7 LEU8 VAL9 CYS10 ASP11 ASN12 GLY13 SER14 GLY15 LEU16 VAL17 LYS18 ALA19 GLY20 PHE21 ALA22 GLY23 ASP24 ASP25 ALA26 PRO27 ARG28 ALA29 VAL30 PHE31 PRO32 SER33 ILE34 VAL35 GLY36 ARG37 PRO38 ARG39 HIS40 GLN41 GLY42 VAL43 MET44 VAL45 GLY46 MET47 GLY48 GLN49 LYS50 ASP51 SER52 TYR53 VAL54 GLY55 ASP56 GLU57 ALA58 GLN59 SER60 LYS61 ARG62 GLY63 ILE64 LEU65 THR66 LEU67 LYS68 TYR69 PRO70 ILE71 GLU72 HIS73 GLY74 ILE75 ILE76 THR77 ASN78 TRP79 ASP80 ASP81 MET82 GLU83 LYS84 ILE85 TRP86 HIS87 HIS88 THR89 PHE90 TYR91 ASN92 GLU93 LEU94 ARG95 VAL96 ALA97 PRO98 GLU99 GLU100 HIS101 PRO102 THR103 LEU104 LEU105 THR106 GLU107 ALA108 PRO109 LEU110 ASN111 PRO112 LYS113 ALA114 ASN115 ARG116 GLU117 LYS118 MET119 THR120 GLN121 ILE122 MET123 PHE124 GLU125 THR126 PHE127 ASN128 VAL129 PRO130 ALA131 MET132 TYR133 VAL134 ALA135 ILE136 GLN137 ALA138 VAL139 LEU140 SER141 LEU142 TYR143 ALA144 SER145 GLY146 ARG147 THR148 THR149 GLY150 ILE151 VAL152 LEU153 ASP154 SER155 GLY156 ASP157 GLY158 VAL159 THR160 HIS161 ASN162 VAL163 PRO164 ILE165 TYR166 GLU167 GLY168 TYR169 ALA170 LEU171 PRO172 HIS173 ALA174 ILE175 MET176 ARG177 LEU178 ASP179 LEU180 ALA181 GLY182 ARG183 ASP184 LEU185 THR186 ASP187 TYR188 LEU189 MET190 LYS191 ILE192 LEU193 THR194 GLU195 ARG196 GLY197 TYR198 SER199 PHE200 VAL201 THR202 THR203 ALA204 GLU205 ARG206 GLU207 ILE208 VAL209 ARG210 ASP211 ILE212 LYS213 GLU214 LYS215 LEU216 CYS217 TYR218 VAL219 ALA220 LEU221 ASP222 PHE223 GLU224 ASN225 GLU226 MET227 ALA228 THR229 ALA230 ALA231 SER232 SER233 SER234 SER235 LEU236 GLU237 LYS238 SER239 TYR240 GLU241 LEU242 PRO243 ASP244 GLY245 GLN246 VAL247 ILE248 THR249 ILE250 GLY251 ASN252 GLU253 ARG254 PHE255 ARG256 CYS257 PRO258 GLU259 THR260 LEU261 PHE262 GLN263 PRO264 SER265 PHE266 ILE267 GLY268 MET269 GLU270 SER271 ALA272 GLY273 ILE274 HIS275 GLU276 THR277 THR278 TYR279 ASN280 SER281 ILE282 MET283 LYS284 CYS285 ASP286 ILE287 ASP288 ILE289 ARG290 LYS291 ASP292 LEU293 TYR294 ALA295 ASN296 ASN297 VAL298 MET299 SER300 GLY301 GLY302 THR303 THR304 MET305 TYR306 PRO307 GLY308 ILE309 ALA310 ASP311 ARG312 MET313 GLN314 LYS315 GLU316 ILE317 THR318 ALA319 LEU320 ALA321 PRO322 SER323 THR324 MET325 LYS326 ILE327 LYS328 ILE329 ILE330 ALA331 PRO332 PRO333 GLU334 ARG335 LYS336 TYR337 SER338 VAL339 TRP340 ILE341 GLY342 GLY343 SER344 ILE345 LEU346 ALA347 SER348 LEU349 SER350 THR351 PHE352 GLN353 GLN354 MET355 TRP356 ILE357 THR358 LYS359 GLN360 GLU361 TYR362 ASP363 GLU364 ALA365 GLY366 PRO367 SER368 ILE369 VAL370 HIS371
Unit 3 ASN917 ASP918 ILE919 ILE920 ALA921 ALA922 ALA923 LYS924 ARG925 MET926 ALA927 LEU928 LEU929 MET930 ALA931 GLU932 MET933 SER934 ARG935 LEU936 VAL937 ARG938 GLY939 GLY940 SER941 GLY942 ASN943 LYS944 ARG945 ALA946 LEU947 ILE948 GLN949 CYS950 ALA951 LYS952 ASP953 ILE954 ALA955 LYS956 ALA957 SER958 ASP959 GLU960 VAL961 THR962 ARG963 LEU964 ALA965 LYS966 GLU967 VAL968 ALA969 LYS970 GLN971 CYS972 THR973 ASP974 LYS975 ARG976 ILE977 ARG978 THR979 ASN980 LEU981 LEU982 GLN983 VAL984 CYS985 GLU986 ARG987 ILE988 PRO989 THR990 ILE991 SER992 THR993 GLN994 LEU995 LYS996 ILE997 LEU998 SER999 THR1000 VAL1001 LYS1002 ALA1003 THR1004 MET1005 LEU1006 GLY1007 ARG1008 THR1009 ASN1010 ILE1011 SER1012 ASP1013 GLU1014 GLU1015 SER1016 GLU1017 GLN1018 ALA1019 THR1020 GLU1021 MET1022 LEU1023 VAL1024 HIS1025 ASN1026 ALA1027 GLN1028 ASN1029 LEU1030 MET1031 GLN1032 SER1033 VAL1034 LYS1035 GLU1036 THR1037 VAL1038 ARG1039 GLU1040 ALA1041 GLU1042 ALA1043 ALA1044 SER1045 ILE1046 LYS1047
Ligands
Unit 4 MG401 ADP402
Unit 5 MG401 ADP402
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany