3IYP - Sequence, Chains, Asymmetric and Biological Units

• Title: THE INTERACTION OF DECAY-ACCELERATING FACTOR WITH ECHOVIRUS
• Keywords: VIRUS, RECEPTOR, COMPLEX, ECHOVIRUS, DAF, ICOSAHEDRAL VIRUS
• Experiment: ELECTRON MICROSCOPY
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3IYP	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CAPSID PROTEIN	A	277	2235	0
2	Protein	POLYPROTEIN	B	238	1836	0
3	Protein	POLYPROTEIN	C	252	1979	0
4	Protein	POLYPROTEIN	D	61	476	0
5	Protein	COMPLEMENT DECAY-ACCELERATING FACTOR	F	252	1955	0
6	Ligand	CAPSID PROTEIN	A	1	0	14
total				1081	8481	14

Proteins

Unit 1	ILE 11 ALA 12 ARG 13 VAL 14 ALA 15 ASP 16 THR 17 VAL 18 ALA 19 SER 20 GLY 21 PRO 22 SER 23 ASN 24 SER 25 THR 26 SER 27 ILE 28 PRO 29 ALA 30 LEU 31 THR 32 ALA 33 VAL 34 GLU 35 THR 36 GLY 37 HIS 38 THR 39 SER 40 GLN 41 VAL 42 GLU 43 PRO 44 SER 45 ASP 46 THR 47 MET 48 GLN 49 THR 50 ARG 51 HIS 52 VAL 53 LYS 54 ASN 55 TYR 56 HIS 57 SER 58 ARG 59 SER 60 GLU 61 SER 62 THR 63 VAL 64 GLU 65 ASN 66 PHE 67 LEU 68 SER 69 ARG 70 SER 71 ALA 72 CYS 73 VAL 74 TYR 75 ILE 76 GLU 77 GLU 78 TYR 79 TYR 80 THR 81 LYS 82 ASP 83 GLN 84 ASP 85 ASN 86 VAL 87 ASN 88 ARG 89 TYR 90 MET 91 SER 92 TRP 93 THR 94 ILE 95 ASN 96 ALA 97 ARG 98 ARG 99 MET 100 VAL 101 GLN 102 LEU 103 ARG 104 ARG 105 LYS 106 PHE 107 GLU 108 LEU 109 PHE 110 THR 111 TYR 112 MET 113 ARG 114 PHE 115 ASP 116 MET 117 GLU 118 ILE 119 THR 120 PHE 121 VAL 122 ILE 123 THR 124 SER 125 ARG 126 GLN 127 LEU 128 PRO 129 GLY 130 THR 131 SER 132 ILE 133 ALA 134 GLN 135 ASP 136 MET 137 PRO 138 PRO 139 LEU 140 THR 141 HIS 142 GLN 143 ILE 144 MET 145 TYR 146 ILE 147 PRO 148 PRO 149 GLY 150 GLY 151 PRO 152 VAL 153 PRO 154 ASN 155 SER 156 VAL 157 THR 158 ASP 159 PHE 160 ALA 161 TRP 162 GLN 163 THR 164 SER 165 THR 166 ASN 167 PRO 168 SER 169 ILE 170 PHE 171 TRP 172 THR 173 GLU 174 GLY 175 ASN 176 ALA 177 PRO 178 PRO 179 ARG 180 MET 181 SER 182 ILE 183 PRO 184 PHE 185 ILE 186 SER 187 ILE 188 GLY 189 ASN 190 ALA 191 TYR 192 SER 193 ASN 194 PHE 195 TYR 196 ASP 197 GLY 198 TRP 199 SER 200 HIS 201 PHE 202 SER 203 GLN 204 ASN 205 GLY 206 VAL 207 TYR 208 GLY 209 TYR 210 ASN 211 ALA 212 LEU 213 ASN 214 ASN 215 MET 216 GLY 217 LYS 218 LEU 219 TYR 220 ALA 221 ARG 222 HIS 223 VAL 224 ASN 225 LYS 226 ASP 227 THR 228 PRO 229 TYR 230 GLN 231 MET 232 SER 233 SER 234 THR 235 ILE 236 ARG 237 VAL 238 TYR 239 PHE 240 LYS 241 PRO 242 LYS 243 HIS 244 ILE 245 ARG 246 VAL 247 TRP 248 VAL 249 PRO 250 ARG 251 PRO 252 PRO 253 ARG 254 LEU 255 SER 256 PRO 257 TYR 258 ILE 259 LYS 260 SER 261 SER 262 ASN 263 VAL 264 ASN 265 PHE 266 ASN 267 PRO 268 THR 269 ASN 270 LEU 271 THR 272 ASP 273 GLU 274 ARG 275 SER 276 SER 277 ILE 278 THR 279 TYR 280 VAL 281 PRO 282 ASP 283 THR 284 ILE 285 ARG 286 PRO 287
Unit 2	GLY 1 LEU 2 PRO 3 VAL 4 LEU 5 ASN 6 THR 7 PRO 8 GLY 9 SER 10 ASN 11 GLN 12 PHE 13 MET 14 THR 15 SER 16 ASP 17 ASP 18 PHE 19 GLN 20 SER 21 PRO 22 SER 23 ALA 24 MET 25 PRO 26 GLN 27 PHE 28 ASP 29 VAL 30 THR 31 PRO 32 HIS 33 MET 34 ASP 35 ILE 36 PRO 37 GLY 38 GLU 39 VAL 40 HIS 41 ASN 42 LEU 43 MET 44 GLU 45 ILE 46 ALA 47 GLU 48 VAL 49 ASP 50 SER 51 VAL 52 VAL 53 PRO 54 VAL 55 ASN 56 ASN 57 ILE 58 LYS 59 ALA 60 ASN 61 LEU 62 GLN 63 SER 64 MET 65 ASP 66 ALA 67 TYR 68 HIS 69 ILE 70 GLU 71 VAL 72 ASN 73 THR 74 GLY 75 ASN 76 TYR 77 GLN 78 GLY 79 GLU 80 LYS 81 ILE 82 PHE 83 ALA 84 PHE 85 GLN 86 MET 87 GLN 88 PRO 89 GLY 90 LEU 91 GLU 92 SER 93 VAL 94 PHE 95 LYS 96 ARG 97 THR 98 LEU 99 MET 100 GLY 101 GLU 102 ILE 103 LEU 104 ASN 105 TYR 106 TYR 107 ALA 108 HIS 109 TRP 110 SER 111 GLY 112 SER 113 ILE 114 LYS 115 LEU 116 THR 117 PHE 118 THR 119 PHE 120 CYS 121 GLY 122 SER 123 ALA 124 MET 125 ALA 126 THR 127 GLY 128 LYS 129 LEU 130 LEU 131 LEU 132 ALA 133 TYR 134 SER 135 PRO 136 PRO 137 GLY 138 ALA 139 ASP 140 VAL 141 PRO 142 ALA 143 THR 144 ARG 145 LYS 146 GLN 147 ALA 148 MET 149 LEU 150 GLY 151 THR 152 HIS 153 MET 154 ILE 155 TRP 156 ASP 157 ILE 158 GLY 159 LEU 160 GLN 161 SER 162 SER 163 CYS 164 VAL 165 LEU 166 CYS 167 ILE 168 PRO 169 TRP 170 ILE 171 SER 172 GLN 173 THR 174 HIS 175 TYR 176 ARG 177 LEU 178 VAL 179 GLN 180 GLN 181 ASP 182 GLU 183 TYR 184 THR 185 SER 186 ALA 187 GLY 188 ASN 189 VAL 190 THR 191 CYS 192 TRP 193 TYR 194 GLN 195 THR 196 GLY 197 ILE 198 VAL 199 VAL 200 PRO 201 PRO 202 GLY 203 THR 204 PRO 205 ASN 206 LYS 207 CYS 208 VAL 209 VAL 210 LEU 211 CYS 212 PHE 213 ALA 214 SER 215 ALA 216 CYS 217 ASN 218 ASP 219 PHE 220 SER 221 VAL 222 ARG 223 MET 224 LEU 225 ARG 226 ASP 227 THR 228 PRO 229 PHE 230 ILE 231 GLY 232 GLN 233 THR 234 ALA 235 LEU 236 LEU 237 GLN 238
Unit 3	SER 9 ASP 10 ARG 11 VAL 12 ARG 13 SER 14 LEU 15 THR 16 LEU 17 GLY 18 ASN 19 SER 20 THR 21 ILE 22 THR 23 THR 24 GLN 25 GLU 26 SER 27 ALA 28 ASN 29 VAL 30 VAL 31 VAL 32 GLY 33 TYR 34 GLY 35 ARG 36 TRP 37 PRO 38 GLU 39 TYR 40 LEU 41 ARG 42 ASP 43 ASP 44 GLU 45 ALA 46 THR 47 ALA 48 GLU 49 ASP 50 GLN 51 PRO 52 THR 53 GLN 54 PRO 55 ASP 56 VAL 57 ALA 58 THR 59 CYS 60 ARG 61 PHE 62 TYR 63 THR 64 LEU 65 GLU 66 SER 67 VAL 68 GLN 69 TRP 70 GLU 71 LYS 72 ASN 73 SER 74 ALA 75 GLY 76 TRP 77 TRP 78 TRP 79 LYS 80 PHE 81 PRO 82 GLU 83 ALA 84 LEU 85 LYS 86 ASP 87 MET 88 GLY 89 LEU 90 PHE 91 GLY 92 GLN 93 ASN 94 MET 95 LEU 96 TYR 97 HIS 98 TYR 99 LEU 100 GLY 101 ARG 102 ALA 103 GLY 104 TYR 105 THR 106 ILE 107 HIS 108 VAL 109 GLN 110 CYS 111 ASN 112 ALA 113 SER 114 LYS 115 PHE 116 HIS 117 GLN 118 GLY 119 CYS 120 LEU 121 LEU 122 VAL 123 VAL 124 CYS 125 VAL 126 PRO 127 GLU 128 ALA 129 GLU 130 MET 131 GLY 132 CYS 133 SER 134 GLN 135 THR 136 ASP 137 LYS 138 GLU 139 VAL 140 ALA 141 ALA 142 MET 143 ASN 144 LEU 145 THR 146 LYS 147 GLY 148 GLU 149 ALA 150 ALA 151 HIS 152 LYS 153 PHE 154 GLU 155 PRO 156 THR 157 LYS 158 THR 159 ASN 160 GLY 161 GLU 162 HIS 163 THR 164 VAL 165 GLN 166 SER 167 ILE 168 VAL 169 CYS 170 ASN 171 ALA 172 GLY 173 MET 174 GLY 175 VAL 176 GLY 177 VAL 178 GLY 179 ASN 180 LEU 181 THR 182 ILE 183 TYR 184 PRO 185 HIS 186 GLN 187 TRP 188 ILE 189 ASN 190 LEU 191 ARG 192 THR 193 ASN 194 ASN 195 CYS 196 ALA 197 THR 198 ILE 199 VAL 200 MET 201 PRO 202 TYR 203 VAL 204 ASN 205 SER 206 VAL 207 PRO 208 MET 209 ASP 210 ASN 211 MET 212 PHE 213 ARG 214 HIS 215 TYR 216 ASN 217 PHE 218 THR 219 LEU 220 MET 221 VAL 222 ILE 223 PRO 224 PHE 225 ALA 226 PRO 227 LEU 228 ASP 229 TYR 230 ALA 231 ALA 232 GLN 233 ALA 234 SER 235 GLU 236 TYR 237 VAL 238 PRO 239 VAL 240 THR 241 VAL 242 THR 243 ILE 244 ALA 245 PRO 246 MET 247 CYS 248 ALA 249 GLU 250 TYR 251 ASN 252 GLY 253 LEU 254 ARG 255 LEU 256 ALA 257 TYR 258 GLN 259 GLN 260
Unit 4	MET 1 GLY 2 ALA 3 GLN 4 VAL 5 SER 6 THR 7 GLN 8 LYS 9 THR 10 GLY 11 ALA 12 HIS 13 GLU 14 THR 15 ILE 24 ILE 25 HIS 26 TYR 27 THR 28 ASN 29 ILE 30 ASN 31 TYR 32 TYR 33 LYS 34 ASP 35 ALA 36 ALA 37 SER 38 ASN 39 SER 40 ALA 41 ASN 42 ARG 43 GLN 44 ASP 45 PHE 46 THR 47 GLN 48 ASP 49 PRO 50 GLY 51 LYS 52 PHE 53 THR 54 GLU 55 PRO 56 VAL 57 LYS 58 ASP 59 ILE 60 MET 61 ILE 62 LYS 63 THR 64 MET 65 PRO 66 ALA 67 LEU 68 ASN 69
Unit 5	GLN 2 ASP 3 CYS 4 GLY 5 LEU 6 PRO 7 PRO 8 ASP 9 VAL 10 PRO 11 ASN 12 ALA 13 GLN 14 PRO 15 ALA 16 LEU 17 GLU 18 GLY 19 ARG 20 THR 21 SER 22 PHE 23 PRO 24 GLU 25 ASP 26 THR 27 VAL 28 ILE 29 THR 30 TYR 31 LYS 32 CYS 33 GLU 34 GLU 35 SER 36 PHE 37 VAL 38 LYS 39 ILE 40 PRO 41 GLY 42 GLU 43 LYS 44 ASP 45 SER 46 VAL 47 ILE 48 CYS 49 LEU 50 LYS 51 GLY 52 SER 53 GLN 54 TRP 55 SER 56 ASP 57 ILE 58 GLU 59 GLU 60 PHE 61 CYS 62 ASN 63 ARG 64 SER 65 CYS 66 GLU 67 VAL 68 PRO 69 THR 70 ARG 71 LEU 72 ASN 73 SER 74 ALA 75 SER 76 LEU 77 LYS 78 GLN 79 PRO 80 TYR 81 ILE 82 THR 83 GLN 84 ASN 85 TYR 86 PHE 87 PRO 88 VAL 89 GLY 90 THR 91 VAL 92 VAL 93 GLU 94 TYR 95 GLU 96 CYS 97 ARG 98 PRO 99 GLY 100 TYR 101 ARG 102 ARG 103 GLU 104 PRO 105 SER 106 LEU 107 SER 108 PRO 109 LYS 110 LEU 111 THR 112 CYS 113 LEU 114 GLN 115 ASN 116 LEU 117 LYS 118 TRP 119 SER 120 THR 121 ALA 122 VAL 123 GLU 124 PHE 125 CYS 126 LYS 127 LYS 128 LYS 129 SER 130 CYS 131 PRO 132 ASN 133 PRO 134 GLY 135 GLU 136 ILE 137 ARG 138 ASN 139 GLY 140 GLN 141 ILE 142 ASP 143 VAL 144 PRO 145 GLY 146 GLY 147 ILE 148 LEU 149 PHE 150 GLY 151 ALA 152 THR 153 ILE 154 SER 155 PHE 156 SER 157 CYS 158 ASN 159 THR 160 GLY 161 TYR 162 LYS 163 LEU 164 PHE 165 GLY 166 SER 167 THR 168 SER 169 SER 170 PHE 171 CYS 172 LEU 173 ILE 174 SER 175 GLY 176 SER 177 SER 178 VAL 179 GLN 180 TRP 181 SER 182 ASP 183 PRO 184 LEU 185 PRO 186 GLU 187 CYS 188 ARG 189 GLU 190 ILE 191 TYR 192 CYS 193 PRO 194 ALA 195 PRO 196 PRO 197 GLN 198 ILE 199 ASP 200 ASN 201 GLY 202 ILE 203 ILE 204 GLN 205 GLY 206 GLU 207 ARG 208 ASP 209 HIS 210 TYR 211 GLY 212 TYR 213 ARG 214 GLN 215 SER 216 VAL 217 THR 218 TYR 219 ALA 220 CYS 221 ASN 222 LYS 223 GLY 224 PHE 225 THR 226 MET 227 ILE 228 GLY 229 GLU 230 HIS 231 SER 232 ILE 233 TYR 234 CYS 235 THR 236 VAL 237 ASN 238 ASN 239 ASP 240 GLU 241 GLY 242 GLU 243 TRP 244 SER 245 GLY 246 PRO 247 PRO 248 PRO 249 GLU 250 CYS 251 ARG 252 GLY 253

Ligands

Unit 6

DAO 1289