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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF RIBOSE 5-PHOSPHATE ISOMERASE A FROM METHANOCALD JANNASCHII
Keywords STRUCTURAL GENOMICS, ISOMERASE, PENTOSE PHOSPHATE PATHWAY, C FIXATION, NPPSFA, NATIONAL PROJECT ON PROTEIN STRUCTURAL AN FUNCTIONAL ANALYSES, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, CARBOHYDRATE METABOLISM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3IXQ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RIBOSE-5-PHOSPHATE ISOMERASE A  A 225 1734 0
2  Protein   RIBOSE-5-PHOSPHATE ISOMERASE A  B 225 1734 0
3  Protein   RIBOSE-5-PHOSPHATE ISOMERASE A  C 225 1734 0
4  Protein   RIBOSE-5-PHOSPHATE ISOMERASE A  D 225 1734 0
5  Ligand   RIBOSE-5-PHOSPHATE ISOMERASE A  A 4 0 16
6  Ligand   RIBOSE-5-PHOSPHATE ISOMERASE A  B 4 0 16
7  Ligand   RIBOSE-5-PHOSPHATE ISOMERASE A  C 4 0 15
8  Ligand   RIBOSE-5-PHOSPHATE ISOMERASE A  D 4 0 16
9 Water     882 0 882
total       1798 6936 945

Proteins
Unit 1 SER2 ASN3 GLU4 ASP5 LEU6 LYS7 LEU8 LYS9 VAL10 ALA11 LYS12 GLU13 ALA14 VAL15 LYS16 LEU17 VAL18 LYS19 ASP20 GLY21 MET22 VAL23 ILE24 GLY25 LEU26 GLY27 THR28 GLY29 SER30 THR31 ALA32 ALA33 LEU34 PHE35 ILE36 ARG37 GLU38 LEU39 GLY40 ASN41 ARG42 ILE43 ARG44 GLU45 GLU46 GLU47 LEU48 THR49 VAL50 PHE51 GLY52 ILE53 PRO54 THR55 SER56 PHE57 GLU58 ALA59 LYS60 MET61 LEU62 ALA63 MET64 GLN65 TYR66 GLU67 ILE68 PRO69 LEU70 VAL71 THR72 LEU73 ASP74 GLU75 TYR76 ASP77 VAL78 ASP79 ILE80 ALA81 PHE82 ASP83 GLY84 ALA85 ASP86 GLU87 VAL88 GLU89 GLU90 THR91 THR92 LEU93 PHE94 LEU95 ILE96 LYS97 GLY98 GLY99 GLY100 GLY101 CYS102 HIS103 THR104 GLN105 GLU106 LYS107 ILE108 VAL109 ASP110 TYR111 ASN112 ALA113 ASN114 GLU115 PHE116 VAL117 VAL118 LEU119 VAL120 ASP121 GLU122 SER123 LYS124 LEU125 VAL126 LYS127 LYS128 LEU129 GLY130 GLU131 LYS132 PHE133 PRO134 ILE135 PRO136 VAL137 GLU138 VAL139 ILE140 PRO141 SER142 ALA143 TYR144 ARG145 VAL146 VAL147 ILE148 ARG149 ALA150 LEU151 SER152 GLU153 MET154 GLY155 GLY156 GLU157 ALA158 VAL159 ILE160 ARG161 LEU162 GLY163 ASP164 ARG165 LYS166 ARG167 GLY168 PRO169 VAL170 ILE171 THR172 ASP173 ASN174 GLY175 ASN176 MET177 ILE178 ILE179 ASP180 VAL181 PHE182 MET183 ASN184 ILE185 ASP186 ASP187 ALA188 ILE189 GLU190 LEU191 GLU192 LYS193 GLU194 ILE195 ASN196 ASN197 ILE198 PRO199 GLY200 VAL201 VAL202 GLU203 ASN204 GLY205 ILE206 PHE207 THR208 LYS209 VAL210 ASP211 LYS212 VAL213 LEU214 VAL215 GLY216 THR217 LYS218 LYS219 GLY220 VAL221 LYS222 THR223 LEU224 LYS225 LYS226
Unit 2 SER2 ASN3 GLU4 ASP5 LEU6 LYS7 LEU8 LYS9 VAL10 ALA11 LYS12 GLU13 ALA14 VAL15 LYS16 LEU17 VAL18 LYS19 ASP20 GLY21 MET22 VAL23 ILE24 GLY25 LEU26 GLY27 THR28 GLY29 SER30 THR31 ALA32 ALA33 LEU34 PHE35 ILE36 ARG37 GLU38 LEU39 GLY40 ASN41 ARG42 ILE43 ARG44 GLU45 GLU46 GLU47 LEU48 THR49 VAL50 PHE51 GLY52 ILE53 PRO54 THR55 SER56 PHE57 GLU58 ALA59 LYS60 MET61 LEU62 ALA63 MET64 GLN65 TYR66 GLU67 ILE68 PRO69 LEU70 VAL71 THR72 LEU73 ASP74 GLU75 TYR76 ASP77 VAL78 ASP79 ILE80 ALA81 PHE82 ASP83 GLY84 ALA85 ASP86 GLU87 VAL88 GLU89 GLU90 THR91 THR92 LEU93 PHE94 LEU95 ILE96 LYS97 GLY98 GLY99 GLY100 GLY101 CYS102 HIS103 THR104 GLN105 GLU106 LYS107 ILE108 VAL109 ASP110 TYR111 ASN112 ALA113 ASN114 GLU115 PHE116 VAL117 VAL118 LEU119 VAL120 ASP121 GLU122 SER123 LYS124 LEU125 VAL126 LYS127 LYS128 LEU129 GLY130 GLU131 LYS132 PHE133 PRO134 ILE135 PRO136 VAL137 GLU138 VAL139 ILE140 PRO141 SER142 ALA143 TYR144 ARG145 VAL146 VAL147 ILE148 ARG149 ALA150 LEU151 SER152 GLU153 MET154 GLY155 GLY156 GLU157 ALA158 VAL159 ILE160 ARG161 LEU162 GLY163 ASP164 ARG165 LYS166 ARG167 GLY168 PRO169 VAL170 ILE171 THR172 ASP173 ASN174 GLY175 ASN176 MET177 ILE178 ILE179 ASP180 VAL181 PHE182 MET183 ASN184 ILE185 ASP186 ASP187 ALA188 ILE189 GLU190 LEU191 GLU192 LYS193 GLU194 ILE195 ASN196 ASN197 ILE198 PRO199 GLY200 VAL201 VAL202 GLU203 ASN204 GLY205 ILE206 PHE207 THR208 LYS209 VAL210 ASP211 LYS212 VAL213 LEU214 VAL215 GLY216 THR217 LYS218 LYS219 GLY220 VAL221 LYS222 THR223 LEU224 LYS225 LYS226
Unit 3 SER2 ASN3 GLU4 ASP5 LEU6 LYS7 LEU8 LYS9 VAL10 ALA11 LYS12 GLU13 ALA14 VAL15 LYS16 LEU17 VAL18 LYS19 ASP20 GLY21 MET22 VAL23 ILE24 GLY25 LEU26 GLY27 THR28 GLY29 SER30 THR31 ALA32 ALA33 LEU34 PHE35 ILE36 ARG37 GLU38 LEU39 GLY40 ASN41 ARG42 ILE43 ARG44 GLU45 GLU46 GLU47 LEU48 THR49 VAL50 PHE51 GLY52 ILE53 PRO54 THR55 SER56 PHE57 GLU58 ALA59 LYS60 MET61 LEU62 ALA63 MET64 GLN65 TYR66 GLU67 ILE68 PRO69 LEU70 VAL71 THR72 LEU73 ASP74 GLU75 TYR76 ASP77 VAL78 ASP79 ILE80 ALA81 PHE82 ASP83 GLY84 ALA85 ASP86 GLU87 VAL88 GLU89 GLU90 THR91 THR92 LEU93 PHE94 LEU95 ILE96 LYS97 GLY98 GLY99 GLY100 GLY101 CYS102 HIS103 THR104 GLN105 GLU106 LYS107 ILE108 VAL109 ASP110 TYR111 ASN112 ALA113 ASN114 GLU115 PHE116 VAL117 VAL118 LEU119 VAL120 ASP121 GLU122 SER123 LYS124 LEU125 VAL126 LYS127 LYS128 LEU129 GLY130 GLU131 LYS132 PHE133 PRO134 ILE135 PRO136 VAL137 GLU138 VAL139 ILE140 PRO141 SER142 ALA143 TYR144 ARG145 VAL146 VAL147 ILE148 ARG149 ALA150 LEU151 SER152 GLU153 MET154 GLY155 GLY156 GLU157 ALA158 VAL159 ILE160 ARG161 LEU162 GLY163 ASP164 ARG165 LYS166 ARG167 GLY168 PRO169 VAL170 ILE171 THR172 ASP173 ASN174 GLY175 ASN176 MET177 ILE178 ILE179 ASP180 VAL181 PHE182 MET183 ASN184 ILE185 ASP186 ASP187 ALA188 ILE189 GLU190 LEU191 GLU192 LYS193 GLU194 ILE195 ASN196 ASN197 ILE198 PRO199 GLY200 VAL201 VAL202 GLU203 ASN204 GLY205 ILE206 PHE207 THR208 LYS209 VAL210 ASP211 LYS212 VAL213 LEU214 VAL215 GLY216 THR217 LYS218 LYS219 GLY220 VAL221 LYS222 THR223 LEU224 LYS225 LYS226
Unit 4 SER2 ASN3 GLU4 ASP5 LEU6 LYS7 LEU8 LYS9 VAL10 ALA11 LYS12 GLU13 ALA14 VAL15 LYS16 LEU17 VAL18 LYS19 ASP20 GLY21 MET22 VAL23 ILE24 GLY25 LEU26 GLY27 THR28 GLY29 SER30 THR31 ALA32 ALA33 LEU34 PHE35 ILE36 ARG37 GLU38 LEU39 GLY40 ASN41 ARG42 ILE43 ARG44 GLU45 GLU46 GLU47 LEU48 THR49 VAL50 PHE51 GLY52 ILE53 PRO54 THR55 SER56 PHE57 GLU58 ALA59 LYS60 MET61 LEU62 ALA63 MET64 GLN65 TYR66 GLU67 ILE68 PRO69 LEU70 VAL71 THR72 LEU73 ASP74 GLU75 TYR76 ASP77 VAL78 ASP79 ILE80 ALA81 PHE82 ASP83 GLY84 ALA85 ASP86 GLU87 VAL88 GLU89 GLU90 THR91 THR92 LEU93 PHE94 LEU95 ILE96 LYS97 GLY98 GLY99 GLY100 GLY101 CYS102 HIS103 THR104 GLN105 GLU106 LYS107 ILE108 VAL109 ASP110 TYR111 ASN112 ALA113 ASN114 GLU115 PHE116 VAL117 VAL118 LEU119 VAL120 ASP121 GLU122 SER123 LYS124 LEU125 VAL126 LYS127 LYS128 LEU129 GLY130 GLU131 LYS132 PHE133 PRO134 ILE135 PRO136 VAL137 GLU138 VAL139 ILE140 PRO141 SER142 ALA143 TYR144 ARG145 VAL146 VAL147 ILE148 ARG149 ALA150 LEU151 SER152 GLU153 MET154 GLY155 GLY156 GLU157 ALA158 VAL159 ILE160 ARG161 LEU162 GLY163 ASP164 ARG165 LYS166 ARG167 GLY168 PRO169 VAL170 ILE171 THR172 ASP173 ASN174 GLY175 ASN176 MET177 ILE178 ILE179 ASP180 VAL181 PHE182 MET183 ASN184 ILE185 ASP186 ASP187 ALA188 ILE189 GLU190 LEU191 GLU192 LYS193 GLU194 ILE195 ASN196 ASN197 ILE198 PRO199 GLY200 VAL201 VAL202 GLU203 ASN204 GLY205 ILE206 PHE207 THR208 LYS209 VAL210 ASP211 LYS212 VAL213 LEU214 VAL215 GLY216 THR217 LYS218 LYS219 GLY220 VAL221 LYS222 THR223 LEU224 LYS225 LYS226

Ligands
Unit 5 CL231 PGO232 PGO233 PGO234
Unit 6 CL231 PGO233 PGO234 PGO235
Unit 7 ACT227 CL231 PGO233 PGO234
Unit 8 CL231 PGO232 PGO233 PGO234

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany