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Title | CRYSTAL STRUCTURE OF A Z-Z JUNCTION | |
Keywords | Z-DNA, ADAR1, RNA EDITING, INNATE IMMUNITY, DNA JUNCTION, Z ALTERNATIVE PROMOTER USAGE, ALTERNATIVE SPLICING, CYTOPLASM MUTATION, DNA-BINDING, HYDROLASE, ISOPEPTIDE BOND, METAL-BI MRNA PROCESSING, NUCLEUS, PHOSPHOPROTEIN, POLYMORPHISM, RNA RNA-MEDIATED GENE SILENCING, UBL CONJUGATION, ZINC, HYDROLA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3IRQ | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE | D | 64 | 489 | 0 |
2 | Other macromolecule | DNA (5'-D(*GP*TP*CP*GP*CP*GP*CP*GP*TP*CP*GP*CP*GP 3') | G | 14 | 278 | 0 |
3 | Other macromolecule | DNA (5'-D(*AP*CP*CP*GP*CP*GP*CP*GP*AP*CP*GP*CP*GP 3') | F | 14 | 278 | 0 |
4 | Protein | DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE | C | 64 | 495 | 0 |
5 | Protein | DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE | B | 62 | 474 | 0 |
6 | Protein | DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE | A | 61 | 475 | 0 |
7 | Water | 18 | 0 | 18 | ||
total | 297 | 2489 | 18 |
Unit 1 | GLY136 SER137 HIS138 MET139 GLU140 GLN141 ARG142 ILE143 LEU144 LYS145 PHE146 LEU147 GLU148 GLU149 LEU150 GLY151 GLU152 GLY153 LYS154 ALA155 THR156 THR157 ALA158 HIS159 ASP160 LEU161 SER162 GLY163 LYS164 LEU165 GLY166 THR167 PRO168 LYS169 LYS170 GLU171 ILE172 ASN173 ARG174 VAL175 LEU176 TYR177 SER178 LEU179 ALA180 LYS181 LYS182 GLY183 LYS184 LEU185 GLN186 LYS187 GLU188 ALA189 GLY190 THR191 PRO192 PRO193 LEU194 TRP195 LYS196 ILE197 ALA198 VAL199 |
Unit 4 | GLY136 SER137 HIS138 MET139 GLU140 GLN141 ARG142 ILE143 LEU144 LYS145 PHE146 LEU147 GLU148 GLU149 LEU150 GLY151 GLU152 GLY153 LYS154 ALA155 THR156 THR157 ALA158 HIS159 ASP160 LEU161 SER162 GLY163 LYS164 LEU165 GLY166 THR167 PRO168 LYS169 LYS170 GLU171 ILE172 ASN173 ARG174 VAL175 LEU176 TYR177 SER178 LEU179 ALA180 LYS181 LYS182 GLY183 LYS184 LEU185 GLN186 LYS187 GLU188 ALA189 GLY190 THR191 PRO192 PRO193 LEU194 TRP195 LYS196 ILE197 ALA198 VAL199 |
Unit 5 | SER137 HIS138 MET139 GLU140 GLN141 ARG142 ILE143 LEU144 LYS145 PHE146 LEU147 GLU148 GLU149 LEU150 GLY151 GLU152 GLY153 LYS154 ALA155 THR156 THR157 ALA158 HIS159 ASP160 LEU161 SER162 GLY163 LYS164 LEU165 GLY166 THR167 PRO168 LYS169 LYS170 GLU171 ILE172 ASN173 ARG174 VAL175 LEU176 TYR177 SER178 LEU179 ALA180 LYS181 LYS182 GLY183 LYS184 LEU185 GLN186 LYS187 GLU188 ALA189 GLY190 THR191 PRO192 PRO193 LEU194 TRP195 LYS196 ILE197 ALA198 |
Unit 6 | SER137 HIS138 MET139 GLU140 GLN141 ARG142 ILE143 LEU144 LYS145 PHE146 LEU147 GLU148 GLU149 LEU150 GLY151 GLU152 GLY153 LYS154 ALA155 THR156 THR157 ALA158 HIS159 ASP160 LEU161 SER162 GLY163 LYS164 LEU165 GLY166 THR167 PRO168 LYS169 LYS170 GLU171 ILE172 ASN173 ARG174 VAL175 LEU176 TYR177 SER178 LEU179 ALA180 LYS181 LYS182 GLY183 LYS184 LEU185 GLN186 LYS187 GLU188 ALA189 GLY190 THR191 PRO192 PRO193 LEU194 TRP195 LYS196 ILE197 |
Unit 2 | DT0 DC1 DG2 DC3 DG4 DC5 DG6 DT7 DC8 DG9 DC10 DG11 DC12 DG13 |
Unit 3 | DC0 DC1 DG2 DC3 DG4 DC5 DG6 DA7 DC8 DG9 DC10 DG11 DC12 DG13 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |