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Sequence, Chains, Asymmetric and Biological Units

Title ALTERNATIVE BINDING MODE OF RESTRICTION ENDONUCLEASE BCNI TO DNA
Keywords ENDONUCLEASE-DNA COMPLEX, RESTRICTION ENZYME, BCNI, PSEUDOPA SEQUENCE RECOGNITION, PSEUDOSYMMETRY, HYDROLASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3IMB     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   R.BCNI  A 238 1922 0
2  Protein   R.BCNI  B 238 1922 0
3  Protein   R.BCNI  C 238 1922 0
4  Protein   R.BCNI  D 238 1922 0
5  Other macromolecule   5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3'  E 9 184 0
6  Other macromolecule   5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3'  F 9 179 0
7  Other macromolecule   5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3'  G 9 184 0
8  Other macromolecule   5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3'  H 9 179 0
9  Other macromolecule   5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3'  I 9 184 0
10  Other macromolecule   5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3'  J 9 179 0
11  Other macromolecule   5'-D(*GP*TP*CP*CP*GP*GP*GP*CP*G)-3'  K 9 184 0
12  Other macromolecule   5'-D(*CP*GP*CP*CP*CP*GP*GP*AP*C)-3'  L 9 179 0
13 Water     729 0 729
total       1753 9140 729
Proteins
Unit 1 MET1 LYS2 ILE3 TRP4 SER5 LYS6 GLU7 GLU8 VAL9 VAL10 ASN11 LYS12 LEU13 HIS14 GLU15 ILE16 LYS17 ASN18 LYS19 GLY20 TYR21 LEU22 SER23 VAL24 PRO25 THR26 ASP27 MET28 PHE29 ARG30 THR31 ASP32 ASP33 GLY34 VAL35 VAL36 GLY37 GLN38 ILE39 LEU40 GLU41 ARG42 GLN43 PHE44 GLY45 VAL46 GLN47 GLU48 ASN49 ASN50 ILE51 THR52 LEU53 GLY54 ASP55 LEU56 GLY57 GLU58 PHE59 GLU60 LEU61 LYS62 GLY63 MET64 ARG65 ASN66 ARG67 LYS68 ALA69 LYS70 SER71 ASN72 LEU73 THR74 LEU75 PHE76 HIS77 LYS78 LYS79 PRO80 VAL81 ALA82 GLY83 GLN84 THR85 VAL86 ILE87 GLN88 ILE89 PHE90 ASN91 ARG92 PHE93 GLY94 TYR95 VAL96 LYS97 PRO98 SER99 SER100 ARG101 ASN102 PRO103 GLU104 VAL105 MET106 LYS107 LYS108 LYS109 LEU110 PHE111 THR112 THR113 ILE114 LYS115 GLY116 GLY117 ARG118 LEU119 ASN120 ASN121 LEU122 GLY123 LEU124 THR125 LEU126 ASN127 ALA128 LYS129 HIS130 ALA131 SER132 GLU133 ILE134 ASN135 LEU136 TYR137 TYR138 GLN139 ASP140 GLU141 TYR142 LEU143 SER144 THR145 TRP146 ASP147 LEU148 ASN149 LEU150 SER151 LYS152 ILE153 GLU154 LYS155 LEU156 VAL157 LEU158 VAL159 PHE160 ALA161 GLU162 THR163 ILE164 GLY165 ARG166 ALA167 ASN168 SER169 PRO170 GLU171 GLU172 GLN173 PHE174 HIS175 PHE176 THR177 LYS178 ALA179 TYR180 MET181 LEU182 THR183 GLU184 ILE185 ASN186 ASP187 ILE188 THR189 SER190 LEU191 ILE192 ASN193 ASP194 GLY195 VAL196 LEU197 VAL198 MET199 ASP200 LEU201 CYS202 ILE203 ASP204 GLN205 ASP206 LEU207 SER208 LYS209 SER210 LYS211 GLY212 PRO213 HIS214 ASP215 ARG216 GLY217 PRO218 HIS219 LEU220 ARG221 ILE222 PRO223 ILE224 SER225 LYS226 LEU227 ASP228 LYS229 LEU230 TYR231 ARG232 ASN233 ILE234 GLU235 ARG236 LEU237 LEU238
Unit 2 MET1 LYS2 ILE3 TRP4 SER5 LYS6 GLU7 GLU8 VAL9 VAL10 ASN11 LYS12 LEU13 HIS14 GLU15 ILE16 LYS17 ASN18 LYS19 GLY20 TYR21 LEU22 SER23 VAL24 PRO25 THR26 ASP27 MET28 PHE29 ARG30 THR31 ASP32 ASP33 GLY34 VAL35 VAL36 GLY37 GLN38 ILE39 LEU40 GLU41 ARG42 GLN43 PHE44 GLY45 VAL46 GLN47 GLU48 ASN49 ASN50 ILE51 THR52 LEU53 GLY54 ASP55 LEU56 GLY57 GLU58 PHE59 GLU60 LEU61 LYS62 GLY63 MET64 ARG65 ASN66 ARG67 LYS68 ALA69 LYS70 SER71 ASN72 LEU73 THR74 LEU75 PHE76 HIS77 LYS78 LYS79 PRO80 VAL81 ALA82 GLY83 GLN84 THR85 VAL86 ILE87 GLN88 ILE89 PHE90 ASN91 ARG92 PHE93 GLY94 TYR95 VAL96 LYS97 PRO98 SER99 SER100 ARG101 ASN102 PRO103 GLU104 VAL105 MET106 LYS107 LYS108 LYS109 LEU110 PHE111 THR112 THR113 ILE114 LYS115 GLY116 GLY117 ARG118 LEU119 ASN120 ASN121 LEU122 GLY123 LEU124 THR125 LEU126 ASN127 ALA128 LYS129 HIS130 ALA131 SER132 GLU133 ILE134 ASN135 LEU136 TYR137 TYR138 GLN139 ASP140 GLU141 TYR142 LEU143 SER144 THR145 TRP146 ASP147 LEU148 ASN149 LEU150 SER151 LYS152 ILE153 GLU154 LYS155 LEU156 VAL157 LEU158 VAL159 PHE160 ALA161 GLU162 THR163 ILE164 GLY165 ARG166 ALA167 ASN168 SER169 PRO170 GLU171 GLU172 GLN173 PHE174 HIS175 PHE176 THR177 LYS178 ALA179 TYR180 MET181 LEU182 THR183 GLU184 ILE185 ASN186 ASP187 ILE188 THR189 SER190 LEU191 ILE192 ASN193 ASP194 GLY195 VAL196 LEU197 VAL198 MET199 ASP200 LEU201 CYS202 ILE203 ASP204 GLN205 ASP206 LEU207 SER208 LYS209 SER210 LYS211 GLY212 PRO213 HIS214 ASP215 ARG216 GLY217 PRO218 HIS219 LEU220 ARG221 ILE222 PRO223 ILE224 SER225 LYS226 LEU227 ASP228 LYS229 LEU230 TYR231 ARG232 ASN233 ILE234 GLU235 ARG236 LEU237 LEU238
Unit 3 MET1 LYS2 ILE3 TRP4 SER5 LYS6 GLU7 GLU8 VAL9 VAL10 ASN11 LYS12 LEU13 HIS14 GLU15 ILE16 LYS17 ASN18 LYS19 GLY20 TYR21 LEU22 SER23 VAL24 PRO25 THR26 ASP27 MET28 PHE29 ARG30 THR31 ASP32 ASP33 GLY34 VAL35 VAL36 GLY37 GLN38 ILE39 LEU40 GLU41 ARG42 GLN43 PHE44 GLY45 VAL46 GLN47 GLU48 ASN49 ASN50 ILE51 THR52 LEU53 GLY54 ASP55 LEU56 GLY57 GLU58 PHE59 GLU60 LEU61 LYS62 GLY63 MET64 ARG65 ASN66 ARG67 LYS68 ALA69 LYS70 SER71 ASN72 LEU73 THR74 LEU75 PHE76 HIS77 LYS78 LYS79 PRO80 VAL81 ALA82 GLY83 GLN84 THR85 VAL86 ILE87 GLN88 ILE89 PHE90 ASN91 ARG92 PHE93 GLY94 TYR95 VAL96 LYS97 PRO98 SER99 SER100 ARG101 ASN102 PRO103 GLU104 VAL105 MET106 LYS107 LYS108 LYS109 LEU110 PHE111 THR112 THR113 ILE114 LYS115 GLY116 GLY117 ARG118 LEU119 ASN120 ASN121 LEU122 GLY123 LEU124 THR125 LEU126 ASN127 ALA128 LYS129 HIS130 ALA131 SER132 GLU133 ILE134 ASN135 LEU136 TYR137 TYR138 GLN139 ASP140 GLU141 TYR142 LEU143 SER144 THR145 TRP146 ASP147 LEU148 ASN149 LEU150 SER151 LYS152 ILE153 GLU154 LYS155 LEU156 VAL157 LEU158 VAL159 PHE160 ALA161 GLU162 THR163 ILE164 GLY165 ARG166 ALA167 ASN168 SER169 PRO170 GLU171 GLU172 GLN173 PHE174 HIS175 PHE176 THR177 LYS178 ALA179 TYR180 MET181 LEU182 THR183 GLU184 ILE185 ASN186 ASP187 ILE188 THR189 SER190 LEU191 ILE192 ASN193 ASP194 GLY195 VAL196 LEU197 VAL198 MET199 ASP200 LEU201 CYS202 ILE203 ASP204 GLN205 ASP206 LEU207 SER208 LYS209 SER210 LYS211 GLY212 PRO213 HIS214 ASP215 ARG216 GLY217 PRO218 HIS219 LEU220 ARG221 ILE222 PRO223 ILE224 SER225 LYS226 LEU227 ASP228 LYS229 LEU230 TYR231 ARG232 ASN233 ILE234 GLU235 ARG236 LEU237 LEU238
Unit 4 MET1 LYS2 ILE3 TRP4 SER5 LYS6 GLU7 GLU8 VAL9 VAL10 ASN11 LYS12 LEU13 HIS14 GLU15 ILE16 LYS17 ASN18 LYS19 GLY20 TYR21 LEU22 SER23 VAL24 PRO25 THR26 ASP27 MET28 PHE29 ARG30 THR31 ASP32 ASP33 GLY34 VAL35 VAL36 GLY37 GLN38 ILE39 LEU40 GLU41 ARG42 GLN43 PHE44 GLY45 VAL46 GLN47 GLU48 ASN49 ASN50 ILE51 THR52 LEU53 GLY54 ASP55 LEU56 GLY57 GLU58 PHE59 GLU60 LEU61 LYS62 GLY63 MET64 ARG65 ASN66 ARG67 LYS68 ALA69 LYS70 SER71 ASN72 LEU73 THR74 LEU75 PHE76 HIS77 LYS78 LYS79 PRO80 VAL81 ALA82 GLY83 GLN84 THR85 VAL86 ILE87 GLN88 ILE89 PHE90 ASN91 ARG92 PHE93 GLY94 TYR95 VAL96 LYS97 PRO98 SER99 SER100 ARG101 ASN102 PRO103 GLU104 VAL105 MET106 LYS107 LYS108 LYS109 LEU110 PHE111 THR112 THR113 ILE114 LYS115 GLY116 GLY117 ARG118 LEU119 ASN120 ASN121 LEU122 GLY123 LEU124 THR125 LEU126 ASN127 ALA128 LYS129 HIS130 ALA131 SER132 GLU133 ILE134 ASN135 LEU136 TYR137 TYR138 GLN139 ASP140 GLU141 TYR142 LEU143 SER144 THR145 TRP146 ASP147 LEU148 ASN149 LEU150 SER151 LYS152 ILE153 GLU154 LYS155 LEU156 VAL157 LEU158 VAL159 PHE160 ALA161 GLU162 THR163 ILE164 GLY165 ARG166 ALA167 ASN168 SER169 PRO170 GLU171 GLU172 GLN173 PHE174 HIS175 PHE176 THR177 LYS178 ALA179 TYR180 MET181 LEU182 THR183 GLU184 ILE185 ASN186 ASP187 ILE188 THR189 SER190 LEU191 ILE192 ASN193 ASP194 GLY195 VAL196 LEU197 VAL198 MET199 ASP200 LEU201 CYS202 ILE203 ASP204 GLN205 ASP206 LEU207 SER208 LYS209 SER210 LYS211 GLY212 PRO213 HIS214 ASP215 ARG216 GLY217 PRO218 HIS219 LEU220 ARG221 ILE222 PRO223 ILE224 SER225 LYS226 LEU227 ASP228 LYS229 LEU230 TYR231 ARG232 ASN233 ILE234 GLU235 ARG236 LEU237 LEU238
Other macromolecules
Unit 5 DG-4 DT-3 DC-2 DC-1 DG0 DG1 DG2 DC3 DG4
Unit 6 DC-4 DG-3 DC-2 DC-1 DC0 DG1 DG2 DA3 DC4
Unit 7 DG-4 DT-3 DC-2 DC-1 DG0 DG1 DG2 DC3 DG4
Unit 8 DC-4 DG-3 DC-2 DC-1 DC0 DG1 DG2 DA3 DC4
Unit 9 DG-4 DT-3 DC-2 DC-1 DG0 DG1 DG2 DC3 DG4
Unit 10 DC-4 DG-3 DC-2 DC-1 DC0 DG1 DG2 DA3 DC4
Unit 11 DG-4 DT-3 DC-2 DC-1 DG0 DG1 DG2 DC3 DG4
Unit 12 DC-4 DG-3 DC-2 DC-1 DC0 DG1 DG2 DA3 DC4
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany