3II6 - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF HUMAN XRCC4 IN COMPLEX WITH THE TANDEM BRCT DOM DNA LIGASEIV.
• Keywords: XRCC4, DNA LIGASE IV, NHEJ, DNA REPAIR, BRCT, ALTERNATIVE SP COILED COIL, DNA DAMAGE, DNA RECOMBINATION, ISOPEPTIDE BOND NUCLEUS, PHOSPHOPROTEIN, POLYMORPHISM, UBL CONJUGATION, ATP CELL CYCLE, CELL DIVISION, DISEASE MUTATION, DNA REPLICATIO LIGASE, MAGNESIUM, METAL-BINDING, NUCLEOTIDE-BINDING, SCID, DNA BINDING PROTEIN COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3II6	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA REPAIR PROTEIN XRCC4	A	201	1631	0
2	Protein	DNA REPAIR PROTEIN XRCC4	B	196	1606	0
3	Protein	DNA REPAIR PROTEIN XRCC4	C	201	1631	0
4	Protein	DNA REPAIR PROTEIN XRCC4	D	195	1598	0
5	Protein	DNA LIGASE 4	X	256	2081	0
6	Protein	DNA LIGASE 4	Y	258	2095	0
7	Ligand	DNA LIGASE 4	Y	2	0	2
8	Water			281	0	281
total				1590	10642	283

Proteins

Unit 1	MET 1 GLU 2 ARG 3 LYS 4 ILE 5 SER 6 ARG 7 ILE 8 HIS 9 LEU 10 VAL 11 SER 12 GLU 13 PRO 14 SER 15 ILE 16 THR 17 HIS 18 PHE 19 LEU 20 GLN 21 VAL 22 SER 23 TRP 24 GLU 25 LYS 26 THR 27 LEU 28 GLU 29 SER 30 GLY 31 PHE 32 VAL 33 ILE 34 THR 35 LEU 36 THR 37 ASP 38 GLY 39 HIS 40 SER 41 ALA 42 TRP 43 THR 44 GLY 45 THR 46 VAL 47 SER 48 GLU 49 SER 50 GLU 51 ILE 52 SER 53 GLN 54 GLU 55 ALA 56 ASP 57 ASP 58 MET 59 GLU 60 MET 61 GLU 62 LYS 63 GLY 64 LYS 65 TYR 66 VAL 67 GLY 68 GLU 69 LEU 70 ARG 71 LYS 72 ALA 73 LEU 74 LEU 75 SER 76 GLY 77 ALA 78 GLY 79 PRO 80 ALA 81 ASP 82 VAL 83 TYR 84 THR 85 PHE 86 ASN 87 PHE 88 SER 89 LYS 90 GLU 91 SER 92 CYS 93 TYR 94 PHE 95 PHE 96 PHE 97 GLU 98 LYS 99 ASN 100 LEU 101 LYS 102 ASP 103 VAL 104 SER 105 PHE 106 ARG 107 LEU 108 GLY 109 SER 110 PHE 111 ASN 112 LEU 113 GLU 114 LYS 115 VAL 116 GLU 117 ASN 118 PRO 119 ALA 120 GLU 121 VAL 122 ILE 123 ARG 124 GLU 125 LEU 126 ILE 127 CYS 128 TYR 129 CYS 130 LEU 131 ASP 132 THR 133 THR 134 ALA 135 GLU 136 ASN 137 GLN 138 ALA 139 LYS 140 ASN 141 GLU 142 HIS 143 LEU 144 GLN 145 LYS 146 GLU 147 ASN 148 GLU 149 ARG 150 LEU 151 LEU 152 ARG 153 ASP 154 TRP 155 ASN 156 ASP 157 VAL 158 GLN 159 GLY 160 ARG 161 PHE 162 GLU 163 LYS 164 CYS 165 VAL 166 SER 167 ALA 168 LYS 169 GLU 170 ALA 171 LEU 172 GLU 173 THR 174 ASP 175 LEU 176 TYR 177 LYS 178 ARG 179 PHE 180 ILE 181 LEU 182 VAL 183 LEU 184 ASN 185 GLU 186 LYS 187 LYS 188 THR 189 LYS 190 ILE 191 ARG 192 SER 193 LEU 194 HIS 195 ASN 196 LYS 197 LEU 198 LEU 199 ASN 200 ALA 201
Unit 2	MET 1 GLU 2 ARG 3 LYS 4 ILE 5 SER 6 ARG 7 ILE 8 HIS 9 LEU 10 VAL 11 SER 12 GLU 13 PRO 14 SER 15 ILE 16 THR 17 HIS 18 PHE 19 LEU 20 GLN 21 VAL 22 SER 23 TRP 24 GLU 25 LYS 26 THR 27 LEU 28 GLU 29 SER 30 GLY 31 PHE 32 VAL 33 ILE 34 THR 35 LEU 36 THR 37 ASP 38 GLY 39 HIS 40 SER 41 ALA 42 TRP 43 THR 44 GLY 45 THR 46 VAL 47 SER 48 GLU 49 SER 50 GLU 51 ILE 52 SER 53 GLN 54 GLU 55 ALA 56 ASP 57 ASP 58 MET 59 GLU 60 MET 61 GLU 62 LYS 63 GLY 64 LYS 65 TYR 66 VAL 67 GLY 68 GLU 69 LEU 70 ARG 71 LYS 72 ALA 73 LEU 74 LEU 75 SER 76 ASP 82 VAL 83 TYR 84 THR 85 PHE 86 ASN 87 PHE 88 SER 89 LYS 90 GLU 91 SER 92 CYS 93 TYR 94 PHE 95 PHE 96 PHE 97 GLU 98 LYS 99 ASN 100 LEU 101 LYS 102 ASP 103 VAL 104 SER 105 PHE 106 ARG 107 LEU 108 GLY 109 SER 110 PHE 111 ASN 112 LEU 113 GLU 114 LYS 115 VAL 116 GLU 117 ASN 118 PRO 119 ALA 120 GLU 121 VAL 122 ILE 123 ARG 124 GLU 125 LEU 126 ILE 127 CYS 128 TYR 129 CYS 130 LEU 131 ASP 132 THR 133 THR 134 ALA 135 GLU 136 ASN 137 GLN 138 ALA 139 LYS 140 ASN 141 GLU 142 HIS 143 LEU 144 GLN 145 LYS 146 GLU 147 ASN 148 GLU 149 ARG 150 LEU 151 LEU 152 ARG 153 ASP 154 TRP 155 ASN 156 ASP 157 VAL 158 GLN 159 GLY 160 ARG 161 PHE 162 GLU 163 LYS 164 CYS 165 VAL 166 SER 167 ALA 168 LYS 169 GLU 170 ALA 171 LEU 172 GLU 173 THR 174 ASP 175 LEU 176 TYR 177 LYS 178 ARG 179 PHE 180 ILE 181 LEU 182 VAL 183 LEU 184 ASN 185 GLU 186 LYS 187 LYS 188 THR 189 LYS 190 ILE 191 ARG 192 SER 193 LEU 194 HIS 195 ASN 196 LYS 197 LEU 198 LEU 199 ASN 200 ALA 201
Unit 3	MET 1 GLU 2 ARG 3 LYS 4 ILE 5 SER 6 ARG 7 ILE 8 HIS 9 LEU 10 VAL 11 SER 12 GLU 13 PRO 14 SER 15 ILE 16 THR 17 HIS 18 PHE 19 LEU 20 GLN 21 VAL 22 SER 23 TRP 24 GLU 25 LYS 26 THR 27 LEU 28 GLU 29 SER 30 GLY 31 PHE 32 VAL 33 ILE 34 THR 35 LEU 36 THR 37 ASP 38 GLY 39 HIS 40 SER 41 ALA 42 TRP 43 THR 44 GLY 45 THR 46 VAL 47 SER 48 GLU 49 SER 50 GLU 51 ILE 52 SER 53 GLN 54 GLU 55 ALA 56 ASP 57 ASP 58 MET 59 GLU 60 MET 61 GLU 62 LYS 63 GLY 64 LYS 65 TYR 66 VAL 67 GLY 68 GLU 69 LEU 70 ARG 71 LYS 72 ALA 73 LEU 74 LEU 75 SER 76 GLY 77 ALA 78 GLY 79 PRO 80 ALA 81 ASP 82 VAL 83 TYR 84 THR 85 PHE 86 ASN 87 PHE 88 SER 89 LYS 90 GLU 91 SER 92 CYS 93 TYR 94 PHE 95 PHE 96 PHE 97 GLU 98 LYS 99 ASN 100 LEU 101 LYS 102 ASP 103 VAL 104 SER 105 PHE 106 ARG 107 LEU 108 GLY 109 SER 110 PHE 111 ASN 112 LEU 113 GLU 114 LYS 115 VAL 116 GLU 117 ASN 118 PRO 119 ALA 120 GLU 121 VAL 122 ILE 123 ARG 124 GLU 125 LEU 126 ILE 127 CYS 128 TYR 129 CYS 130 LEU 131 ASP 132 THR 133 THR 134 ALA 135 GLU 136 ASN 137 GLN 138 ALA 139 LYS 140 ASN 141 GLU 142 HIS 143 LEU 144 GLN 145 LYS 146 GLU 147 ASN 148 GLU 149 ARG 150 LEU 151 LEU 152 ARG 153 ASP 154 TRP 155 ASN 156 ASP 157 VAL 158 GLN 159 GLY 160 ARG 161 PHE 162 GLU 163 LYS 164 CYS 165 VAL 166 SER 167 ALA 168 LYS 169 GLU 170 ALA 171 LEU 172 GLU 173 THR 174 ASP 175 LEU 176 TYR 177 LYS 178 ARG 179 PHE 180 ILE 181 LEU 182 VAL 183 LEU 184 ASN 185 GLU 186 LYS 187 LYS 188 THR 189 LYS 190 ILE 191 ARG 192 SER 193 LEU 194 HIS 195 ASN 196 LYS 197 LEU 198 LEU 199 ASN 200 ALA 201
Unit 4	MET 1 GLU 2 ARG 3 LYS 4 ILE 5 SER 6 ARG 7 ILE 8 HIS 9 LEU 10 VAL 11 SER 12 GLU 13 PRO 14 SER 15 ILE 16 THR 17 HIS 18 PHE 19 LEU 20 GLN 21 VAL 22 SER 23 TRP 24 GLU 25 LYS 26 THR 27 LEU 28 GLU 29 SER 30 GLY 31 PHE 32 VAL 33 ILE 34 THR 35 LEU 36 THR 37 ASP 38 GLY 39 HIS 40 SER 41 ALA 42 TRP 43 THR 44 GLY 45 THR 46 VAL 47 SER 48 GLU 49 SER 50 GLU 51 ILE 52 SER 53 GLN 54 GLU 55 ALA 56 ASP 57 ASP 58 MET 59 GLU 60 MET 61 GLU 62 LYS 63 GLY 64 LYS 65 TYR 66 VAL 67 GLY 68 GLU 69 LEU 70 ARG 71 LYS 72 ALA 73 LEU 74 LEU 75 SER 76 VAL 83 TYR 84 THR 85 PHE 86 ASN 87 PHE 88 SER 89 LYS 90 GLU 91 SER 92 CYS 93 TYR 94 PHE 95 PHE 96 PHE 97 GLU 98 LYS 99 ASN 100 LEU 101 LYS 102 ASP 103 VAL 104 SER 105 PHE 106 ARG 107 LEU 108 GLY 109 SER 110 PHE 111 ASN 112 LEU 113 GLU 114 LYS 115 VAL 116 GLU 117 ASN 118 PRO 119 ALA 120 GLU 121 VAL 122 ILE 123 ARG 124 GLU 125 LEU 126 ILE 127 CYS 128 TYR 129 CYS 130 LEU 131 ASP 132 THR 133 THR 134 ALA 135 GLU 136 ASN 137 GLN 138 ALA 139 LYS 140 ASN 141 GLU 142 HIS 143 LEU 144 GLN 145 LYS 146 GLU 147 ASN 148 GLU 149 ARG 150 LEU 151 LEU 152 ARG 153 ASP 154 TRP 155 ASN 156 ASP 157 VAL 158 GLN 159 GLY 160 ARG 161 PHE 162 GLU 163 LYS 164 CYS 165 VAL 166 SER 167 ALA 168 LYS 169 GLU 170 ALA 171 LEU 172 GLU 173 THR 174 ASP 175 LEU 176 TYR 177 LYS 178 ARG 179 PHE 180 ILE 181 LEU 182 VAL 183 LEU 184 ASN 185 GLU 186 LYS 187 LYS 188 THR 189 LYS 190 ILE 191 ARG 192 SER 193 LEU 194 HIS 195 ASN 196 LYS 197 LEU 198 LEU 199 ASN 200 ALA 201
Unit 5	LYS 654 ILE 655 SER 656 ASN 657 ILE 658 PHE 659 GLU 660 ASP 661 VAL 662 GLU 663 PHE 664 CYS 665 VAL 666 MET 667 SER 668 GLY 669 THR 670 GLN 673 PRO 674 LYS 675 PRO 676 ASP 677 LEU 678 GLU 679 ASN 680 ARG 681 ILE 682 ALA 683 GLU 684 PHE 685 GLY 686 GLY 687 TYR 688 ILE 689 VAL 690 GLN 691 ASN 692 PRO 693 GLY 694 PRO 695 ASP 696 THR 697 TYR 698 CYS 699 VAL 700 ILE 701 ALA 702 GLY 703 SER 704 GLU 705 ASN 706 ILE 707 ARG 708 VAL 709 LYS 710 ASN 711 ILE 712 ILE 713 LEU 714 SER 715 ASN 716 LYS 717 HIS 718 ASP 719 VAL 720 VAL 721 LYS 722 PRO 723 ALA 724 TRP 725 LEU 726 LEU 727 GLU 728 CYS 729 PHE 730 LYS 731 THR 732 LYS 733 SER 734 PHE 735 VAL 736 PRO 737 TRP 738 GLN 739 PRO 740 ARG 741 PHE 742 MET 743 ILE 744 HIS 745 MET 746 CYS 747 PRO 748 SER 749 THR 750 LYS 751 GLU 752 HIS 753 PHE 754 ALA 755 ARG 756 GLU 757 TYR 758 ASP 759 CYS 760 TYR 761 GLY 762 ASP 763 SER 764 TYR 765 PHE 766 ILE 767 ASP 768 THR 769 ASP 770 LEU 771 ASN 772 GLN 773 LEU 774 LYS 775 GLU 776 VAL 777 PHE 778 SER 779 GLY 780 ILE 781 LYS 782 ASN 783 SER 784 ASN 785 GLU 786 GLN 787 THR 788 PRO 789 GLU 790 GLU 791 MET 792 ALA 793 SER 794 LEU 795 ILE 796 ALA 797 ASP 798 LEU 799 GLU 800 TYR 801 ARG 802 TYR 803 SER 804 TRP 805 ASP 806 CYS 807 SER 808 PRO 809 LEU 810 SER 811 MET 812 PHE 813 ARG 814 ARG 815 HIS 816 THR 817 VAL 818 TYR 819 LEU 820 ASP 821 SER 822 TYR 823 ALA 824 VAL 825 ILE 826 ASN 827 ASP 828 LEU 829 SER 830 THR 831 LYS 832 ASN 833 GLU 834 GLY 835 THR 836 ARG 837 LEU 838 ALA 839 ILE 840 LYS 841 ALA 842 LEU 843 GLU 844 LEU 845 ARG 846 PHE 847 HIS 848 GLY 849 ALA 850 LYS 851 VAL 852 VAL 853 SER 854 CYS 855 LEU 856 ALA 857 GLU 858 GLY 859 VAL 860 SER 861 HIS 862 VAL 863 ILE 864 ILE 865 GLY 866 GLU 867 ASP 868 HIS 869 SER 870 ARG 871 VAL 872 ALA 873 ASP 874 PHE 875 LYS 876 ALA 877 PHE 878 ARG 879 ARG 880 THR 881 PHE 882 LYS 883 ARG 884 LYS 885 PHE 886 LYS 887 ILE 888 LEU 889 LYS 890 GLU 891 SER 892 TRP 893 VAL 894 THR 895 ASP 896 SER 897 ILE 898 ASP 899 LYS 900 CYS 901 GLU 902 LEU 903 GLN 904 GLU 905 GLU 906 ASN 907 GLN 908 TYR 909 LEU 910 ILE 911
Unit 6	LYS 654 ILE 655 SER 656 ASN 657 ILE 658 PHE 659 GLU 660 ASP 661 VAL 662 GLU 663 PHE 664 CYS 665 VAL 666 MET 667 SER 668 GLY 669 THR 670 ASP 671 SER 672 GLN 673 PRO 674 LYS 675 PRO 676 ASP 677 LEU 678 GLU 679 ASN 680 ARG 681 ILE 682 ALA 683 GLU 684 PHE 685 GLY 686 GLY 687 TYR 688 ILE 689 VAL 690 GLN 691 ASN 692 PRO 693 GLY 694 PRO 695 ASP 696 THR 697 TYR 698 CYS 699 VAL 700 ILE 701 ALA 702 GLY 703 SER 704 GLU 705 ASN 706 ILE 707 ARG 708 VAL 709 LYS 710 ASN 711 ILE 712 ILE 713 LEU 714 SER 715 ASN 716 LYS 717 HIS 718 ASP 719 VAL 720 VAL 721 LYS 722 PRO 723 ALA 724 TRP 725 LEU 726 LEU 727 GLU 728 CYS 729 PHE 730 LYS 731 THR 732 LYS 733 SER 734 PHE 735 VAL 736 PRO 737 TRP 738 GLN 739 PRO 740 ARG 741 PHE 742 MET 743 ILE 744 HIS 745 MET 746 CYS 747 PRO 748 SER 749 THR 750 LYS 751 GLU 752 HIS 753 PHE 754 ALA 755 ARG 756 GLU 757 TYR 758 ASP 759 CYS 760 TYR 761 GLY 762 ASP 763 SER 764 TYR 765 PHE 766 ILE 767 ASP 768 THR 769 ASP 770 LEU 771 ASN 772 GLN 773 LEU 774 LYS 775 GLU 776 VAL 777 PHE 778 SER 779 GLY 780 ILE 781 LYS 782 ASN 783 SER 784 ASN 785 GLU 786 GLN 787 THR 788 PRO 789 GLU 790 GLU 791 MET 792 ALA 793 SER 794 LEU 795 ILE 796 ALA 797 ASP 798 LEU 799 GLU 800 TYR 801 ARG 802 TYR 803 SER 804 TRP 805 ASP 806 CYS 807 SER 808 PRO 809 LEU 810 SER 811 MET 812 PHE 813 ARG 814 ARG 815 HIS 816 THR 817 VAL 818 TYR 819 LEU 820 ASP 821 SER 822 TYR 823 ALA 824 VAL 825 ILE 826 ASN 827 ASP 828 LEU 829 SER 830 THR 831 LYS 832 ASN 833 GLU 834 GLY 835 THR 836 ARG 837 LEU 838 ALA 839 ILE 840 LYS 841 ALA 842 LEU 843 GLU 844 LEU 845 ARG 846 PHE 847 HIS 848 GLY 849 ALA 850 LYS 851 VAL 852 VAL 853 SER 854 CYS 855 LEU 856 ALA 857 GLU 858 GLY 859 VAL 860 SER 861 HIS 862 VAL 863 ILE 864 ILE 865 GLY 866 GLU 867 ASP 868 HIS 869 SER 870 ARG 871 VAL 872 ALA 873 ASP 874 PHE 875 LYS 876 ALA 877 PHE 878 ARG 879 ARG 880 THR 881 PHE 882 LYS 883 ARG 884 LYS 885 PHE 886 LYS 887 ILE 888 LEU 889 LYS 890 GLU 891 SER 892 TRP 893 VAL 894 THR 895 ASP 896 SER 897 ILE 898 ASP 899 LYS 900 CYS 901 GLU 902 LEU 903 GLN 904 GLU 905 GLU 906 ASN 907 GLN 908 TYR 909 LEU 910 ILE 911

Ligands

Unit 7

CL 301 CL 302