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Sequence, Chains, Asymmetric and Biological Units

Title X-RAY STRUCTURE OF PDE2A
Keywords PHOSPHODIESTERASE, PDE2A, GAF-DOMAINS, ALLOSTERIC REGULATION HYDROLASE, MEMBRANE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3IBJ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE  A 661 5291 0
2  Protein   CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE  B 643 5164 0
3  Ligand   CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE  A 2 0 2
4  Ligand   CGMP-DEPENDENT 3',5'-CYCLIC PHOSPHODIESTERASE  B 2 0 2
5 Water     191 0 191
total       1499 10455 195
Proteins
Unit 1 TYR223 THR224 ASP225 ARG226 ASP227 ARG228 LYS229 ILE230 LEU231 GLN232 LEU233 CYS234 GLY235 GLU236 LEU237 TYR238 ASP239 LEU240 ASP241 ALA242 SER243 SER244 LEU245 GLN246 LEU247 LYS248 VAL249 LEU250 GLN251 TYR252 LEU253 GLN254 GLN255 GLU256 THR257 ARG258 ALA259 SER260 ARG261 CYS262 CYS263 LEU264 LEU265 LEU266 VAL267 SER268 GLU269 ASP270 ASN271 LEU272 GLN273 LEU274 SER275 CYS276 LYS277 VAL278 ILE279 GLY280 ASP281 LYS282 VAL283 LEU284 GLY285 GLU286 GLU287 VAL288 SER289 PHE290 PRO291 LEU292 THR293 GLY294 CYS295 LEU296 GLY297 GLN298 VAL299 VAL300 GLU301 ASP302 LYS303 LYS304 SER305 ILE306 GLN307 LEU308 LYS309 ASP310 LEU311 THR312 SER313 GLU314 ASP315 VAL316 GLN317 GLN318 LEU319 GLN320 SER321 MET322 LEU323 GLY324 CYS325 GLU326 LEU327 GLN328 ALA329 MET330 LEU331 CYS332 VAL333 PRO334 VAL335 ILE336 SER337 ARG338 ALA339 THR340 ASP341 GLN342 VAL343 VAL344 ALA345 LEU346 ALA347 CYS348 ALA349 PHE350 ASN351 LYS352 LEU353 GLU354 GLY355 ASP356 LEU357 PHE358 THR359 ASP360 GLU361 ASP362 GLU363 HIS364 VAL365 ILE366 GLN367 HIS368 CYS369 PHE370 HIS371 TYR372 THR373 SER374 THR375 VAL376 LEU377 THR378 SER379 THR380 LEU381 ALA382 PHE383 GLN384 LYS385 GLU386 GLN387 LYS388 LEU389 LYS390 CYS391 GLU392 CYS393 GLN394 ALA395 LEU396 LEU397 GLN398 VAL399 ALA400 LYS401 ASN402 LEU403 PHE404 THR405 HIS406 LEU407 ASP408 ASP409 VAL410 SER411 VAL412 LEU413 LEU414 GLN415 GLU416 ILE417 ILE418 THR419 GLU420 ALA421 ARG422 ASN423 LEU424 SER425 ASN426 ALA427 GLU428 ILE429 CYS430 SER431 VAL432 PHE433 LEU434 LEU435 ASP436 GLN437 ASN438 GLU439 LEU440 VAL441 ALA442 LYS443 VAL444 PHE445 ASP446 GLY447 GLY448 VAL449 VAL450 ASP451 ASP452 GLU453 SER454 TYR455 GLU456 ILE457 ARG458 ILE459 PRO460 ALA461 ASP462 GLN463 GLY464 ILE465 ALA466 GLY467 HIS468 VAL469 ALA470 THR471 THR472 GLY473 GLN474 ILE475 LEU476 ASN477 ILE478 PRO479 ASP480 ALA481 TYR482 ALA483 HIS484 PRO485 LEU486 PHE487 SER494 THR495 GLY496 PHE497 ARG498 THR499 ARG500 ASN501 ILE502 LEU503 CYS504 PHE505 PRO506 ILE507 LYS508 ASN509 GLU510 ASN511 GLN512 GLU513 VAL514 ILE515 GLY516 VAL517 ALA518 GLU519 LEU520 VAL521 ASN522 LYS523 ILE524 ASN525 GLY526 PRO527 TRP528 PHE529 SER530 LYS531 PHE532 ASP533 GLU534 ASP535 LEU536 ALA537 THR538 ALA539 PHE540 SER541 ILE542 TYR543 CYS544 GLY545 ILE546 SER547 ILE548 ALA549 HIS550 SER551 LEU552 LEU553 TYR554 LYS555 LYS556 VAL557 ASN558 GLU559 ALA560 GLN561 TYR562 ARG563 SER564 HIS565 LEU566 ALA567 ASN568 GLU569 MET570 MET571 MET572 TYR573 HIS574 MET575 LYS576 VAL577 SER578 ASP579 ASP580 GLU581 TYR582 THR583 LYS584 LEU585 LEU586 HIS587 ASP588 GLY589 ILE590 GLN591 PRO592 VAL593 ALA594 ALA595 ILE596 ASP597 SER598 ASN599 PHE600 ALA601 SER602 PHE603 THR604 TYR605 THR606 PRO607 ARG608 SER609 LEU610 PRO611 GLU612 ASP613 ASP614 THR615 SER616 MET617 ALA618 ILE619 LEU620 SER621 MET622 LEU623 GLN624 ASP625 MET626 ASN627 PHE628 ILE629 ASN630 ASN631 TYR632 LYS633 ILE634 ASP635 CYS636 PRO637 THR638 LEU639 ALA640 ARG641 PHE642 CYS643 LEU644 MET645 VAL646 LYS647 LYS648 GLY649 TYR650 ARG651 ASP652 PRO653 PRO654 TYR655 HIS656 ASN657 TRP658 MET659 HIS660 ALA661 PHE662 SER663 VAL664 SER665 HIS666 PHE667 CYS668 TYR669 LEU670 LEU671 TYR672 LYS673 ASN674 LEU675 GLU676 LEU677 THR678 ASN679 TYR680 LEU681 GLU682 ASP683 ILE684 GLU685 ILE686 PHE687 ALA688 LEU689 PHE690 ILE691 SER692 CYS693 MET694 CYS695 HIS696 ASP697 LEU698 ASP699 HIS700 ARG701 GLY702 THR703 ASN704 ASN705 SER706 PHE707 GLN708 VAL709 ALA710 SER711 LYS712 SER713 VAL714 LEU715 ALA716 ALA717 LEU718 TYR719 SER720 SER721 GLU722 GLY723 SER724 VAL725 MET726 GLU727 ARG728 HIS729 HIS730 PHE731 ALA732 GLN733 ALA734 ILE735 ALA736 ILE737 LEU738 ASN739 THR740 HIS741 GLY742 CYS743 ASN744 ILE745 PHE746 ASP747 HIS748 PHE749 SER750 ARG751 LYS752 ASP753 TYR754 GLN755 ARG756 MET757 LEU758 ASP759 LEU760 MET761 ARG762 ASP763 ILE764 ILE765 LEU766 ALA767 THR768 ASP769 LEU770 ALA771 HIS772 HIS773 LEU774 ARG775 ILE776 PHE777 LYS778 ASP779 LEU780 GLN781 LYS782 MET783 ALA784 GLU785 VAL786 GLY787 TYR788 ASP789 ARG790 ASN791 ASN792 LYS793 GLN794 HIS795 HIS796 ARG797 LEU798 LEU799 LEU800 CYS801 LEU802 LEU803 MET804 THR805 SER806 CYS807 ASP808 LEU809 SER810 ASP811 GLN812 THR813 LYS814 GLY815 TRP816 LYS817 THR818 THR819 ARG820 LYS821 ILE822 ALA823 GLU824 LEU825 ILE826 TYR827 LYS828 GLU829 PHE830 PHE831 SER832 GLN833 GLY834 ASP835 LEU836 GLU837 LYS838 ALA839 GLU851 LYS852 ALA853 TYR854 ILE855 PRO856 GLU857 LEU858 GLN859 ILE860 SER861 PHE862 MET863 GLU864 HIS865 ILE866 ALA867 MET868 PRO869 ILE870 TYR871 LYS872 LEU873 LEU874 GLN875 ASP876 LEU877 PHE878 PRO879 LYS880 ALA881 ALA882 GLU883 LEU884 TYR885 GLU886 ARG887 VAL888 ALA889 SER890 ASN891 ARG892 GLU893 HIS894 TRP895 THR896 LYS897 VAL898 SER899 HIS900
Unit 2 TYR223 THR224 ASP225 ARG226 ASP227 ARG228 LYS229 ILE230 LEU231 GLN232 LEU233 CYS234 GLY235 GLU236 LEU237 TYR238 ASP239 LEU240 ASP241 ALA242 SER243 SER244 LEU245 GLN246 LEU247 LYS248 VAL249 LEU250 GLN251 TYR252 LEU253 GLN254 GLN255 GLU256 THR257 ARG258 ALA259 SER260 ARG261 CYS262 CYS263 LEU264 LEU265 LEU266 VAL267 SER268 GLU269 ASP270 ASN271 LEU272 GLN273 LEU274 SER275 CYS276 LYS277 VAL278 ILE279 GLY280 ASP281 LYS282 VAL283 LEU284 GLY285 GLU286 GLU287 VAL288 SER289 PHE290 PRO291 LEU292 THR293 GLY294 CYS295 LEU296 GLY297 GLN298 VAL299 VAL300 GLU301 ASP302 LYS303 LYS304 SER305 ILE306 GLN307 LEU308 LYS309 ASP310 LEU311 THR312 SER313 GLU314 ASP315 VAL316 GLN317 GLN318 LEU319 GLN320 SER321 MET322 LEU323 GLY324 CYS325 GLU326 LEU327 GLN328 ALA329 MET330 LEU331 CYS332 VAL333 PRO334 VAL335 ILE336 SER337 ARG338 ALA339 THR340 ASP341 GLN342 VAL343 VAL344 ALA345 LEU346 ALA347 CYS348 ALA349 PHE350 ASN351 LYS352 LEU353 GLU354 GLY355 ASP356 LEU357 PHE358 THR359 ASP360 GLU361 ASP362 GLU363 HIS364 VAL365 ILE366 GLN367 HIS368 CYS369 PHE370 HIS371 TYR372 THR373 SER374 THR375 VAL376 LEU377 THR378 SER379 THR380 LEU381 ALA382 PHE383 GLN384 LYS385 GLU386 GLN387 LYS388 LEU389 LYS390 CYS391 GLU392 CYS393 GLN394 ALA395 LEU396 LEU397 GLN398 VAL399 ALA400 LYS401 ASN402 LEU403 PHE404 THR405 HIS406 LEU407 ASP408 ASP409 VAL410 SER411 VAL412 LEU413 LEU414 GLN415 GLU416 ILE417 ILE418 THR419 GLU420 ALA421 ARG422 ASN423 LEU424 SER425 ASN426 ALA427 GLU428 ILE429 CYS430 SER431 VAL432 PHE433 LEU434 LEU435 ASP436 GLN437 ASN438 GLU439 LEU440 VAL441 ALA442 LYS443 VAL444 SER454 TYR455 GLU456 ILE457 ARG458 ILE459 PRO460 ALA461 ASP462 GLN463 GLY464 ILE465 ALA466 GLY467 HIS468 VAL469 ALA470 THR471 THR472 GLY473 GLN474 ILE475 LEU476 ASN477 ILE478 PRO479 ASP480 ALA481 TYR482 ARG498 THR499 ARG500 ASN501 ILE502 LEU503 CYS504 PHE505 PRO506 ILE507 LYS508 ASN509 GLU510 ASN511 GLN512 GLU513 VAL514 ILE515 GLY516 VAL517 ALA518 GLU519 LEU520 VAL521 ASN522 LYS523 ILE524 ASN525 GLY526 PRO527 TRP528 PHE529 SER530 LYS531 PHE532 ASP533 GLU534 ASP535 LEU536 ALA537 THR538 ALA539 PHE540 SER541 ILE542 TYR543 CYS544 GLY545 ILE546 SER547 ILE548 ALA549 HIS550 SER551 LEU552 LEU553 TYR554 LYS555 LYS556 VAL557 ASN558 GLU559 ALA560 GLN561 TYR562 ARG563 SER564 HIS565 LEU566 ALA567 ASN568 GLU569 MET570 MET571 MET572 TYR573 HIS574 MET575 LYS576 VAL577 SER578 ASP579 ASP580 GLU581 TYR582 THR583 LYS584 LEU585 LEU586 HIS587 ASP588 GLY589 ILE590 GLN591 PRO592 VAL593 ALA594 ALA595 ILE596 ASP597 SER598 ASN599 PHE600 ALA601 SER602 PHE603 THR604 TYR605 THR606 PRO607 ARG608 SER609 LEU610 PRO611 GLU612 ASP613 ASP614 THR615 SER616 MET617 ALA618 ILE619 LEU620 SER621 MET622 LEU623 GLN624 ASP625 MET626 ASN627 PHE628 ILE629 ASN630 ASN631 TYR632 LYS633 ILE634 ASP635 CYS636 PRO637 THR638 LEU639 ALA640 ARG641 PHE642 CYS643 LEU644 MET645 VAL646 LYS647 LYS648 GLY649 TYR650 ARG651 ASP652 PRO653 PRO654 TYR655 HIS656 ASN657 TRP658 MET659 HIS660 ALA661 PHE662 SER663 VAL664 SER665 HIS666 PHE667 CYS668 TYR669 LEU670 LEU671 TYR672 LYS673 ASN674 LEU675 GLU676 LEU677 THR678 ASN679 TYR680 LEU681 GLU682 ASP683 ILE684 GLU685 ILE686 PHE687 ALA688 LEU689 PHE690 ILE691 SER692 CYS693 MET694 CYS695 HIS696 ASP697 LEU698 ASP699 HIS700 ARG701 GLY702 THR703 ASN704 LYS712 SER713 VAL714 LEU715 ALA716 ALA717 LEU718 TYR719 SER720 SER721 GLU722 GLY723 SER724 VAL725 MET726 GLU727 ARG728 HIS729 HIS730 PHE731 ALA732 GLN733 ALA734 ILE735 ALA736 ILE737 LEU738 ASN739 THR740 HIS741 GLY742 CYS743 ASN744 ILE745 PHE746 ASP747 HIS748 PHE749 SER750 ARG751 LYS752 ASP753 TYR754 GLN755 ARG756 MET757 LEU758 ASP759 LEU760 MET761 ARG762 ASP763 ILE764 ILE765 LEU766 ALA767 THR768 ASP769 LEU770 ALA771 HIS772 HIS773 LEU774 ARG775 ILE776 PHE777 LYS778 ASP779 LEU780 GLN781 LYS782 MET783 ALA784 GLU785 VAL786 GLY787 TYR788 ASP789 ARG790 ASN791 ASN792 LYS793 GLN794 HIS795 HIS796 ARG797 LEU798 LEU799 LEU800 CYS801 LEU802 LEU803 MET804 THR805 SER806 CYS807 ASP808 LEU809 SER810 ASP811 GLN812 THR813 LYS814 GLY815 TRP816 LYS817 THR818 THR819 ARG820 LYS821 ILE822 ALA823 GLU824 LEU825 ILE826 TYR827 LYS828 GLU829 PHE830 PHE831 SER832 GLN833 GLY834 ASP835 LEU836 GLU837 LYS838 ALA839 MET848 ASP849 ARG850 GLU851 LYS852 ALA853 TYR854 ILE855 PRO856 GLU857 LEU858 GLN859 ILE860 SER861 PHE862 MET863 GLU864 HIS865 ILE866 ALA867 MET868 PRO869 ILE870 TYR871 LYS872 LEU873 LEU874 GLN875 ASP876 LEU877 PHE878 PRO879 LYS880 ALA881 ALA882 GLU883 LEU884 TYR885 GLU886 ARG887 VAL888 ALA889 SER890 ASN891 ARG892 GLU893 HIS894 TRP895 THR896 LYS897 VAL898 SER899 HIS900 LEU901 VAL902 PRO903 ARG904
Ligands
Unit 3 ZN1 MG905
Unit 4 ZN2 MG905
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany