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Title | STRUCTURAL BASIS OF THE PREVENTION OF NSAID-INDUCED DAMAGE O GASTROINTESTINAL TRACT BY C-TERMINAL HALF (C-LOBE) OF BOVIN COLOSTRUM PROTEIN LACTOFERRIN: BINDING AND STRUCTURAL STUDI LOBE COMPLEX WITH INDOMETHACIN | |
Keywords | C-LOBE, DRUGS, METAL BINDING PROTEIN, ANTIBIOTIC, ANTIMICROB DISULFIDE BOND, GLYCOPROTEIN, HYDROLASE, ION TRANSPORT, IRO TRANSPORT, METAL-BINDING, PHOSPHOPROTEIN, PROTEASE, SECRETE PROTEASE, TRANSPORT | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3IB1 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | LACTOTRANSFERRIN | A | 341 | 2604 | 0 |
2 | Ligand | B | 3 | 0 | 39 | |
3 | Ligand | C | 6 | 0 | 72 | |
4 | Ligand | LACTOTRANSFERRIN | A | 7 | 0 | 51 |
5 | Water | 244 | 0 | 244 | ||
total | 601 | 2604 | 406 |
Unit 1 | TYR342 THR343 ARG344 VAL345 VAL346 TRP347 CYS348 ALA349 VAL350 GLY351 PRO352 GLU353 GLU354 GLN355 LYS356 LYS357 CYS358 GLN359 GLN360 TRP361 SER362 GLN363 GLN364 SER365 GLY366 GLN367 ASN368 VAL369 THR370 CYS371 ALA372 THR373 ALA374 SER375 THR376 THR377 ASP378 ASP379 CYS380 ILE381 VAL382 LEU383 VAL384 LEU385 LYS386 GLY387 GLU388 ALA389 ASP390 ALA391 LEU392 ASN393 LEU394 ASP395 GLY396 GLY397 TYR398 ILE399 TYR400 THR401 ALA402 GLY403 LYS404 CYS405 GLY406 LEU407 VAL408 PRO409 VAL410 LEU411 ALA412 GLU413 ASN414 ARG415 LYS416 SER417 SER418 LYS419 HIS420 SER421 SER422 LEU423 ASP424 CYS425 VAL426 LEU427 ARG428 PRO429 THR430 GLU431 GLY432 TYR433 LEU434 ALA435 VAL436 ALA437 VAL438 VAL439 LYS440 LYS441 ALA442 ASN443 GLU444 GLY445 LEU446 THR447 TRP448 ASN449 SER450 LEU451 LYS452 ASP453 LYS454 LYS455 SER456 CYS457 HIS458 THR459 ALA460 VAL461 ASP462 ARG463 THR464 ALA465 GLY466 TRP467 ASN468 ILE469 PRO470 MET471 GLY472 LEU473 ILE474 VAL475 ASN476 GLN477 THR478 GLY479 SER480 CYS481 ALA482 PHE483 ASP484 GLU485 PHE486 PHE487 SER488 GLN489 SER490 CYS491 ALA492 PRO493 GLY494 ALA495 ASP496 PRO497 LYS498 SER499 ARG500 LEU501 CYS502 ALA503 LEU504 CYS505 ALA506 GLY507 ASP508 ASP509 GLN510 GLY511 LEU512 ASP513 LYS514 CYS515 VAL516 PRO517 ASN518 SER519 LYS520 GLU521 LYS522 TYR523 TYR524 GLY525 TYR526 THR527 GLY528 ALA529 PHE530 ARG531 CYS532 LEU533 ALA534 GLU535 ASP536 VAL537 GLY538 ASP539 VAL540 ALA541 PHE542 VAL543 LYS544 ASN545 ASP546 THR547 VAL548 TRP549 GLU550 ASN551 THR552 ASN553 GLY554 GLU555 SER556 THR557 ALA558 ASP559 TRP560 ALA561 LYS562 ASN563 LEU564 LYS565 ARG566 GLU567 ASP568 PHE569 ARG570 LEU571 LEU572 CYS573 LEU574 ASP575 GLY576 THR577 ARG578 LYS579 PRO580 VAL581 THR582 GLU583 ALA584 GLN585 SER586 CYS587 HIS588 LEU589 ALA590 VAL591 ALA592 PRO593 ASN594 HIS595 ALA596 VAL597 VAL598 SER599 ARG600 SER601 ASP602 ARG603 ALA604 ALA605 HIS606 VAL607 GLU608 GLN609 VAL610 LEU611 LEU612 HIS613 GLN614 GLN615 ALA616 LEU617 PHE618 GLY619 LYS620 ASN621 GLY622 LYS623 ASN624 CYS625 PRO626 ASP627 LYS628 PHE629 CYS630 LEU631 PHE632 LYS633 SER634 GLU635 THR636 LYS637 ASN638 LEU639 LEU640 PHE641 ASN642 ASP643 ASN644 THR645 GLU646 CYS647 LEU648 ALA649 LYS650 LEU651 GLY652 GLY653 ARG654 PRO655 THR656 TYR657 GLU658 GLU659 TYR660 LEU661 GLY662 THR663 GLU664 TYR665 VAL666 THR667 ALA668 ILE669 ALA670 ASN671 LEU672 LYS673 LYS674 CYS675 SER676 LEU681 GLU682 ALA683 CYS684 ALA685 PHE686 |
Unit 2 | NAG1 NAG2 BMA3 |
Unit 3 | NAG1 NAG2 MAN3 MAN4 MAN5 MAN6 |
Unit 4 | NAG1 SO4301 ZN302 ZN303 FE690 CO3691 IMN701 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |