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Title | CRYSTAL STRUCTURE OF THE HAIRPIN RIBOZYME WITH 2'OME SUBSTRA AND N1-DEAZAADENOSINE AT POSITION A9 | |
Keywords | HAIRPIN RIBOZYME, N1-DEAZAADENOSINE, RNA | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3I2Q | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 33 | 640 | 27 | |
2 | RNA | B | 30 | 613 | 35 | |
3 | RNA | C | 33 | 640 | 27 | |
4 | Ligand | DNA/RNA (30-MER) | B | 1 | 0 | 7 |
5 | RNA | A | 33 | 640 | 27 | |
total | 130 | 2533 | 123 |
Unit 1 | U-5 C-4 C-3 C-2 A2M-1 G1 U2 C3 C4 A5 C6 C7 G8 U31 C32 G33 U34 G35 G36 U37 A38 C39 A40 U41 U42 A43 C44 C45 U46 G47 C48 C49 SO4102 |
Unit 2 | C2 G3 G4 U5 G6 A7 G8 1DP9 A10 G11 G12 G13 S9L14 G15 G16 C17 A18 G19 A20 G21 A22 A23 A24 C25 A26 C27 A28 C29 G30 A31 |
Unit 3 | U-5 C-4 C-3 C-2 A2M-1 G1 U2 C3 C4 A5 C6 C7 G8 U31 C32 G33 U34 G35 G36 U37 A38 C39 A40 U41 U42 A43 C44 C45 U46 G47 C48 C49 SO4102 |
Unit 5 | U-5 C-4 C-3 C-2 A2M-1 G1 U2 C3 C4 A5 C6 C7 G8 U31 C32 G33 U34 G35 G36 U37 A38 C39 A40 U41 U42 A43 C44 C45 U46 G47 C48 C49 SO4102 |
Unit 4 | NCO101 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |