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Sequence, Chains, Asymmetric and Biological Units

Title THE CRYSTAL STRUCTURE OF HUMAN 6 PYRUVOYL TETRAHYDROBIOPTERI
Keywords 6 PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE, PTS, PTP SYNTHASE, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, D MUTATION, LYASE, METAL-BINDING, PHENYLKETONURIA, PHOSPHOPRO TETRAHYDROBIOPTERIN BIOSYNTHESIS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3I2B     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  A 138 1080 0
2  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  D 138 1086 0
3  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  E 138 1064 0
4  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  B 138 1085 0
5  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  C 137 1066 0
6  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  F 138 1071 0
7  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  G 136 1040 0
8  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  H 137 1045 0
9  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  I 138 1084 0
10  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  J 137 1063 0
11  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  K 138 1051 0
12  Protein   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  L 138 1079 0
13  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  A 3 0 6
14  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  D 1 0 1
15  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  E 1 0 1
16  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  B 2 0 8
17  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  C 1 0 1
18  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  F 1 0 1
19  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  G 1 0 1
20  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  H 1 0 1
21  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  I 1 0 1
22  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  J 1 0 1
23  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  K 2 0 2
24  Ligand   6-PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE  L 1 0 1
25 Water     263 0 263
total       1930 12814 288

Proteins
Unit 1 ARG8 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 2 ARG8 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 3 ARG8 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 4 ARG8 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 5 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 6 ARG8 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 7 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 8 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 9 ARG8 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 10 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 11 ARG8 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145
Unit 12 ARG8 ARG9 CYS10 GLN11 ALA12 GLN13 VAL14 SER15 ARG16 ARG17 ILE18 SER19 PHE20 SER21 ALA22 SER23 HIS24 ARG25 LEU26 TYR27 SER28 LYS29 PHE30 LEU31 SER32 ASP33 GLU34 GLU35 ASN36 LEU37 LYS38 LEU39 PHE40 GLY41 LYS42 CYS43 ASN44 ASN45 PRO46 ASN47 GLY48 HIS49 GLY50 HIS51 ASN52 TYR53 LYS54 VAL55 VAL56 VAL57 THR58 VAL59 HIS60 GLY61 GLU62 ILE63 ASP64 PRO65 ALA66 THR67 GLY68 MET69 VAL70 MET71 ASN72 LEU73 ALA74 ASP75 LEU76 LYS77 LYS78 TYR79 MET80 GLU81 GLU82 ALA83 ILE84 MET85 GLN86 PRO87 LEU88 ASP89 HIS90 LYS91 ASN92 LEU93 ASP94 MET95 ASP96 VAL97 PRO98 TYR99 PHE100 ALA101 ASP102 VAL103 VAL104 SER105 THR106 THR107 GLU108 ASN109 VAL110 ALA111 VAL112 TYR113 ILE114 TRP115 ASP116 ASN117 LEU118 GLN119 LYS120 VAL121 LEU122 PRO123 VAL124 GLY125 VAL126 LEU127 TYR128 LYS129 VAL130 LYS131 VAL132 TYR133 GLU134 THR135 ASP136 ASN137 ASN138 ILE139 VAL140 VAL141 TYR142 LYS143 GLY144 GLU145

Ligands
Unit 13 EDO1 MG2 NI146
Unit 14 NI4
Unit 15 NI146
Unit 16 PEG1 NI2
Unit 17 NI3
Unit 18 NI146
Unit 19 NI146
Unit 20 NI146
Unit 21 NI146
Unit 22 NI146
Unit 23 MG1 NI146
Unit 24 NI146

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany