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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS ANTI-SIGMA F IN COMPLEX WITH -35 PROMOTER BINDING DOMAIN OF SIGL
Keywords ECF SIGMA FACTOR, ZINC BINDING ANTI-SIGMA FACTOR, OXIDATIVE TRANSCRIPTION REGULATION, DNA BINDING, METAL BINDING, HXXXC MOTIF, DNA-BINDING, SIGMA FACTOR, TRANSCRIPTION, TRANSCRIPT MEMBRANE PROTEIN COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   3HUG     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA POLYMERASE SIGMA FACTOR  A 80 622 0
2  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  B 62 462 0
3  Protein   RNA POLYMERASE SIGMA FACTOR  C 77 598 0
4  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  D 62 465 0
5  Protein   RNA POLYMERASE SIGMA FACTOR  E 73 565 0
6  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  F 56 426 0
7  Protein   RNA POLYMERASE SIGMA FACTOR  G 74 576 0
8  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  H 61 459 0
9  Protein   RNA POLYMERASE SIGMA FACTOR  I 77 598 0
10  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  J 64 477 0
11  Protein   RNA POLYMERASE SIGMA FACTOR  K 71 549 0
12  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  L 63 470 0
13  Protein   RNA POLYMERASE SIGMA FACTOR  M 74 576 0
14  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  N 61 459 0
15  Protein   RNA POLYMERASE SIGMA FACTOR  O 73 569 0
16  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  P 60 450 0
17  Protein   RNA POLYMERASE SIGMA FACTOR  Q 77 598 0
18  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  R 63 470 0
19  Protein   RNA POLYMERASE SIGMA FACTOR  S 73 569 0
20  Protein   PROBABLE CONSERVED MEMBRANE PROTEIN  T 62 465 0
21  Ligand   RNA POLYMERASE SIGMA FACTOR  A 1 0 5
22  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  B 1 0 1
23  Ligand   RNA POLYMERASE SIGMA FACTOR  C 1 0 5
24  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  D 1 0 1
25  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  F 1 0 1
26  Ligand   RNA POLYMERASE SIGMA FACTOR  G 1 0 5
27  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  H 1 0 1
28  Ligand   RNA POLYMERASE SIGMA FACTOR  I 2 0 10
29  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  J 1 0 1
30  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  L 2 0 6
31  Ligand   RNA POLYMERASE SIGMA FACTOR  M 1 0 5
32  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  N 1 0 1
33  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  P 2 0 6
34  Ligand   RNA POLYMERASE SIGMA FACTOR  Q 1 0 5
35  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  R 1 0 1
36  Ligand   RNA POLYMERASE SIGMA FACTOR  S 1 0 5
37  Ligand   PROBABLE CONSERVED MEMBRANE PROTEIN  T 1 0 1
38 Water     269 0 269
total       1652 10423 329

Proteins
Unit 1 ASP98 PRO99 GLU100 GLN101 SER102 THR103 PRO104 ASP105 GLU106 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 2 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79 ALA80 ALA81 ILE82 SER83 GLU84 SER85 ALA86
Unit 3 GLN101 SER102 THR103 PRO104 ASP105 GLU106 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 4 ASP24 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79 ALA80 ALA81 ILE82 SER83 GLU84 SER85
Unit 5 ASP105 GLU106 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 6 ASP24 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79
Unit 7 PRO104 ASP105 GLU106 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 8 ASP24 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79 ALA80 ALA81 ILE82 SER83 GLU84
Unit 9 GLN101 SER102 THR103 PRO104 ASP105 GLU106 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 10 ASP24 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79 ALA80 ALA81 ILE82 SER83 GLU84 SER85 ALA86 PRO87
Unit 11 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 12 ASP24 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79 ALA80 ALA81 ILE82 SER83 GLU84 SER85 ALA86
Unit 13 PRO104 ASP105 GLU106 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 14 ASP24 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79 ALA80 ALA81 ILE82 SER83 GLU84
Unit 15 ASP105 GLU106 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 16 ASP24 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79 ALA80 ALA81 ILE82 SER83
Unit 17 GLN101 SER102 THR103 PRO104 ASP105 GLU106 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 18 ASP24 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79 ALA80 ALA81 ILE82 SER83 GLU84 SER85 ALA86
Unit 19 ASP105 GLU106 VAL107 ASN108 ALA109 ALA110 LEU111 ASP112 ARG113 LEU114 LEU115 ILE116 ALA117 ASP118 ALA119 LEU120 ALA121 GLN122 LEU123 SER124 ALA125 GLU126 HIS127 ARG128 ALA129 VAL130 ILE131 GLN132 ARG133 SER134 TYR135 TYR136 ARG137 GLY138 TRP139 SER140 THR141 ALA142 GLN143 ILE144 ALA145 THR146 ASP147 LEU148 GLY149 ILE150 ALA151 GLU152 GLY153 THR154 VAL155 LYS156 SER157 ARG158 LEU159 HIS160 TYR161 ALA162 VAL163 ARG164 ALA165 LEU166 ARG167 LEU168 THR169 LEU170 GLN171 GLU172 LEU173 GLY174 VAL175 THR176 ARG177
Unit 20 ASP24 HIS25 HIS26 TYR27 ALA28 MET29 TRP30 ASP31 ALA32 ALA33 TYR34 VAL35 LEU36 GLY37 ALA38 LEU39 SER40 ALA41 ALA42 ASP43 ARG44 ARG45 GLU46 PHE47 GLU48 ALA49 HIS50 LEU51 ALA52 GLY53 CYS54 PRO55 GLU56 CYS57 ARG58 GLY59 ALA60 VAL61 THR62 GLU63 LEU64 CYS65 GLY66 VAL67 PRO68 ALA69 LEU70 LEU71 SER72 GLN73 LEU74 ASP75 ARG76 ASP77 GLU78 VAL79 ALA80 ALA81 ILE82 SER83 GLU84 SER85

Ligands
Unit 21 SO43
Unit 22 ZN109
Unit 23 SO45
Unit 24 ZN109
Unit 25 ZN109
Unit 26 SO46
Unit 27 ZN109
Unit 28 SO49 SO410
Unit 29 ZN109
Unit 30 SO4109 ZN110
Unit 31 SO44
Unit 32 ZN109
Unit 33 SO4109 ZN110
Unit 34 SO41
Unit 35 ZN109
Unit 36 SO47
Unit 37 ZN109

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany