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Title | CRYSTAL STRUCTURE OF MURINE THROMBIN MUTANT W215A/E217A IN C WITH THE EXTRACELLULAR FRAGMENT OF HUMAN PAR1 | |
Keywords | SERINE PROTEASE, ACUTE PHASE, BLOOD COAGULATION, CLEAVAGE ON BASIC RESIDUES, DISULFIDE BOND, GAMMA-CARBOXYGLUTAMIC ACID, GLYCOPROTEIN, HYDROLASE, KRINGLE, PROTEASE, ZYMOGEN, CELL M G-PROTEIN COUPLED RECEPTOR, MEMBRANE, PHOSPHOPROTEIN, RECEP TRANSDUCER, TRANSMEMBRANE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 3HKI | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | THROMBIN LIGHT CHAIN | A | 40 | 328 | 0 |
2 | Protein | THROMBIN HEAVY CHAIN | B | 255 | 2074 | 0 |
3 | Protein | PROTEINASE-ACTIVATED RECEPTOR 1 | C | 15 | 139 | 0 |
4 | Protein | THROMBIN LIGHT CHAIN | D | 43 | 348 | 0 |
5 | Protein | THROMBIN HEAVY CHAIN | E | 252 | 2032 | 0 |
6 | Protein | PROTEINASE-ACTIVATED RECEPTOR 1 | F | 9 | 88 | 0 |
7 | Ligand | THROMBIN HEAVY CHAIN | B | 1 | 0 | 14 |
8 | Ligand | THROMBIN HEAVY CHAIN | E | 1 | 0 | 14 |
9 | Water | 217 | 0 | 217 | ||
total | 833 | 5009 | 245 |
Unit 1 | CYS1 ASP1A ALA1B GLU1C GLY1D LEU1E GLY1F PHE1G THR1H LYS1I GLU1J ASN1K PHE1L PHE1M THR1N HIS1O PHE1P GLY2 LEU3 ARG4 PRO5 LEU6 PHE7 GLU8 LYS9 LYS10 SER11 LEU12 LYS13 ASP14 THR14A THR14B GLU14C LYS14D GLU14E LEU14F LEU14G ASP14H SER14I TYR14J |
Unit 2 | ILE16 VAL17 GLU18 GLY19 TRP20 ASP21 ALA22 GLU23 LYS24 GLY25 ILE26 ALA27 PRO28 TRP29 GLN30 VAL31 MET32 LEU33 PHE34 ARG35 LYS36 SER36A PRO37 GLN38 GLU39 LEU40 LEU41 CYS42 GLY43 ALA44 SER45 LEU46 ILE47 SER48 ASP49 ARG50 TRP51 VAL52 LEU53 THR54 ALA55 ALA56 HIS57 CYS58 ILE59 LEU60 TYR60A PRO60B PRO60C TRP60D ASP60E LYS60F ASN60G PHE60H THR60I GLU61 ASN62 ASP63 LEU64 LEU65 VAL66 ARG67 ILE68 GLY69 LYS70 HIS71 SER72 ARG73 THR74 ARG75 TYR76 GLU77 ARG77A ASN78 VAL79 GLU80 LYS81 ILE82 SER83 MET84 LEU85 GLU86 LYS87 ILE88 TYR89 VAL90 HIS91 PRO92 ARG93 TYR94 ASN95 TRP96 ARG97 GLU97A ASN98 LEU99 ASP100 ARG101 ASP102 ILE103 ALA104 LEU105 LEU106 LYS107 LEU108 LYS109 LYS110 PRO111 VAL112 PRO113 PHE114 SER115 ASP116 TYR117 ILE118 HIS119 PRO120 VAL121 CYS122 LEU123 PRO124 ASP125 LYS126 GLN127 THR128 VAL129 THR129A SER129B LEU129C LEU130 ARG131 ALA132 GLY133 TYR134 LYS135 GLY136 ARG137 VAL138 THR139 GLY140 TRP141 GLY142 ASN143 LEU144 ARG145 GLU146 THR147 TRP148 THR149 ASN149D GLU149E ILE150 GLN151 PRO152 SER153 VAL154 LEU155 GLN156 VAL157 VAL158 ASN159 LEU160 PRO161 ILE162 VAL163 GLU164 ARG165 PRO166 VAL167 CYS168 LYS169 ALA170 SER171 THR172 ARG173 ILE174 ARG175 ILE176 THR177 ASP178 ASN179 MET180 PHE181 CYS182 ALA183 GLY184 PHE184A LYS185 VAL186 ASN186A ASP186B THR186C LYS186D ARG187 GLY188 ASP189 ALA190 CYS191 GLU192 GLY193 ASP194 SER195 GLY196 GLY197 PRO198 PHE199 VAL200 MET201 LYS202 SER203 PRO204 PHE204A ASN204B ASN205 ARG206 TRP207 TYR208 GLN209 MET210 GLY211 ILE212 VAL213 SER214 ALA215 GLY216 ALA217 GLY219 CYS220 ASP221 ARG221A LYS222 GLY223 LYS224 TYR225 GLY226 PHE227 TYR228 THR229 HIS230 VAL231 PHE232 ARG233 LEU234 LYS235 ARG236 TRP237 ILE238 GLN239 LYS240 VAL241 ILE242 ASP243 GLN244 PHE245 GLY246 |
Unit 3 | ARG46 ASN47 PRO48 ASN49 ASP50 LYS51 TYR52 GLU53 PRO54 PHE55 TRP56 GLU57 ASP58 GLU59 GLU60 |
Unit 4 | CYS1 ASP1A ALA1B GLU1C GLY1D LEU1E GLY1F PHE1G THR1H LYS1I GLU1J ASN1K PHE1L PHE1M THR1N HIS1O PHE1P GLY2 LEU3 ARG4 PRO5 LEU6 PHE7 GLU8 LYS9 LYS10 SER11 LEU12 LYS13 ASP14 THR14A THR14B GLU14C LYS14D GLU14E LEU14F LEU14G ASP14H SER14I TYR14J ILE14K ASP14L GLY14M |
Unit 5 | ILE16 VAL17 GLU18 GLY19 TRP20 ASP21 ALA22 GLU23 LYS24 GLY25 ILE26 ALA27 PRO28 TRP29 GLN30 VAL31 MET32 LEU33 PHE34 ARG35 LYS36 SER36A PRO37 GLN38 GLU39 LEU40 LEU41 CYS42 GLY43 ALA44 SER45 LEU46 ILE47 SER48 ASP49 ARG50 TRP51 VAL52 LEU53 THR54 ALA55 ALA56 HIS57 CYS58 ILE59 LEU60 TYR60A PRO60B PRO60C TRP60D ASP60E LYS60F ASN60G PHE60H THR60I GLU61 ASN62 ASP63 LEU64 LEU65 VAL66 ARG67 ILE68 GLY69 LYS70 HIS71 SER72 ARG73 THR74 ARG75 TYR76 GLU77 ARG77A ASN78 VAL79 GLU80 LYS81 ILE82 SER83 MET84 LEU85 GLU86 LYS87 ILE88 TYR89 VAL90 HIS91 PRO92 ARG93 TYR94 ASN95 TRP96 ARG97 GLU97A ASN98 LEU99 ASP100 ARG101 ASP102 ILE103 ALA104 LEU105 LEU106 LYS107 LEU108 LYS109 LYS110 PRO111 VAL112 PRO113 PHE114 SER115 ASP116 TYR117 ILE118 HIS119 PRO120 VAL121 CYS122 LEU123 PRO124 ASP125 LYS126 GLN127 THR128 VAL129 THR129A SER129B LEU129C LEU130 ARG131 ALA132 GLY133 TYR134 LYS135 GLY136 ARG137 VAL138 THR139 GLY140 TRP141 GLY142 ASN143 LEU144 ARG145 GLU146 THR147 TRP148 THR149 ASN149D GLU149E ILE150 GLN151 PRO152 SER153 VAL154 LEU155 GLN156 VAL157 VAL158 ASN159 LEU160 PRO161 ILE162 VAL163 GLU164 ARG165 PRO166 VAL167 CYS168 LYS169 ALA170 SER171 THR172 ARG173 ILE174 ARG175 ILE176 THR177 ASP178 ASN179 MET180 PHE181 CYS182 ALA183 GLY184 PHE184A LYS185 VAL186 ASN186A ASP186B THR186C LYS186D ARG187 GLY188 ASP189 ALA190 CYS191 GLU192 GLY193 ASP194 SER195 GLY196 GLY197 PRO198 PHE199 VAL200 MET201 LYS202 SER203 PRO204 PHE204A ASN204B ASN205 ARG206 TRP207 TYR208 GLN209 MET210 GLY211 ILE212 VAL213 SER214 ALA215 GLY216 ALA217 GLY219 CYS220 GLY223 LYS224 TYR225 GLY226 PHE227 TYR228 THR229 HIS230 VAL231 PHE232 ARG233 LEU234 LYS235 ARG236 TRP237 ILE238 GLN239 LYS240 VAL241 ILE242 ASP243 GLN244 PHE245 GLY246 |
Unit 6 | LYS51 TYR52 GLU53 PRO54 PHE55 TRP56 GLU57 ASP58 GLU59 |
Unit 7 | NAG301 |
Unit 8 | NAG301 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |