3HGQ - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURAL AND FUNCTIONAL STUDIES OF THE YEAST CLASS II HDA1 HDAC COMPLEX
• Keywords: RECA-LIKE DOMAIN, SWI2/SNF2 HELICAL DOMAIN, CHROMATIN REGULATOR, COILED COIL, NUCLEUS, REPRESSOR, TRANSCRIPTION, TRANSCRIPTION REGULATION
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3HGQ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HDA1 COMPLEX SUBUNIT 3	A	299	2369	64
2	Protein	HDA1 COMPLEX SUBUNIT 3	B	290	2309	64
3	Protein	HDA1 COMPLEX SUBUNIT 3	C	290	2309	64
4	Protein	HDA1 COMPLEX SUBUNIT 3	D	290	2309	64
total				1169	9296	256

Proteins

Unit 1	THR 27 SER 28 GLY 29 ASP 30 TYR 31 TRP 32 LEU 33 PRO 34 THR 35 THR 36 MSE 37 SER 38 LEU 39 TYR 40 GLN 41 LYS 42 GLU 43 LEU 44 THR 45 ASP 46 GLN 47 ILE 48 VAL 49 SER 50 LEU 51 HIS 52 TYR 53 SER 54 ASP 55 ILE 56 LEU 57 ARG 58 TYR 59 PHE 60 GLU 61 THR 62 SER 63 HIS 64 TYR 65 LYS 66 GLU 67 ASP 68 VAL 69 ILE 70 LEU 71 GLU 72 SER 73 MSE 74 LYS 75 THR 76 MSE 77 CYS 78 LEU 79 ASN 80 GLY 81 SER 82 LEU 83 VAL 84 ALA 85 THR 86 HIS 87 PRO 88 TYR 89 LEU 90 LEU 91 ILE 92 ASP 93 HIS 94 TYR 95 MSE 96 PRO 97 LYS 98 SER 99 LEU 100 ILE 101 THR 102 ARG 103 ASP 104 VAL 105 PRO 106 ALA 107 HIS 108 LEU 109 ALA 110 GLU 111 ASN 112 SER 113 GLY 114 LYS 115 PHE 116 SER 117 VAL 118 LEU 119 ARG 120 ASP 121 LEU 122 ILE 123 ASN 124 LEU 125 VAL 126 GLN 127 GLU 128 TYR 129 GLU 130 THR 131 GLU 132 THR 133 ALA 134 ILE 135 VAL 136 CYS 137 ARG 138 PRO 139 GLY 140 ARG 141 THR 142 MSE 143 ASP 144 LEU 145 LEU 146 GLU 147 ALA 148 LEU 149 LEU 150 LEU 151 GLY 152 ASN 153 LYS 154 VAL 155 HIS 156 ILE 157 LYS 158 ARG 159 TYR 160 ASP 161 GLY 162 HIS 163 SER 164 ILE 165 LYS 166 SER 167 ALA 168 ALA 169 ALA 170 ALA 171 ASN 172 ASP 173 PHE 174 SER 175 CYS 176 THR 177 VAL 178 HIS 179 LEU 180 PHE 181 SER 182 SER 183 GLU 184 GLY 185 ILE 186 ASN 187 PHE 188 THR 189 LYS 190 TYR 191 PRO 192 ILE 193 LYS 194 SER 195 LYS 196 ALA 197 ARG 198 PHE 199 ASP 200 MSE 201 LEU 202 ILE 203 CYS 204 LEU 205 ASP 206 THR 207 THR 208 VAL 209 ASP 210 THR 211 SER 212 GLN 213 LYS 214 ASP 215 ILE 216 GLN 217 TYR 218 LEU 219 LEU 220 GLN 221 TYR 222 LYS 223 GLU 230 ARG 231 TYR 232 ALA 233 PRO 234 ILE 235 VAL 236 ARG 237 LEU 238 VAL 239 ALA 240 ILE 241 ASN 242 SER 243 ILE 244 ASP 245 HIS 246 CYS 247 ARG 248 LEU 249 PHE 250 PHE 251 GLY 252 LYS 253 LYS 254 PHE 255 ASP 256 LYS 257 ASN 258 SER 259 ARG 260 GLU 261 TYR 262 LEU 263 GLU 264 ASN 265 VAL 266 THR 267 ALA 268 ALA 269 MSE 270 VAL 271 ILE 272 LEU 273 ARG 274 ASP 275 ARG 276 LEU 277 GLY 278 THR 279 LEU 280 PRO 281 PRO 282 ASP 283 LEU 284 ARG 285 PRO 286 ILE 287 TYR 288 SER 289 GLN 290 LYS 291 LEU 292 HIS 293 TYR 294 LEU 295 VAL 296 GLU 297 TRP 298 LEU 299 GLU 300 ASN 301 PRO 302 THR 303 VAL 304 PRO 305 TRP 306 PRO 307 LEU 308 PRO 309 ASP 310 ILE 311 TYR 312 PRO 313 LEU 314 LYS 315 GLN 316 TYR 317 THR 318 SER 319 MSE 320 ASP 321 VAL 322 GLU 323 ARG 324 SER 325 LEU 326 LEU 327 THR 328 GLU 329 VAL 330 HIS 331
Unit 2	THR 27 SER 28 GLY 29 ASP 30 TYR 31 TRP 32 LEU 33 PRO 34 THR 35 THR 36 MSE 37 SER 38 LEU 39 TYR 40 GLN 41 LYS 42 GLU 43 LEU 44 THR 45 ASP 46 GLN 47 ILE 48 VAL 49 SER 50 LEU 51 HIS 52 TYR 53 SER 54 ASP 55 ILE 56 LEU 57 ARG 58 TYR 59 PHE 60 GLU 61 THR 62 SER 63 HIS 64 TYR 65 LYS 66 GLU 67 ASP 68 VAL 69 ILE 70 LEU 71 GLU 72 SER 73 MSE 74 LYS 75 THR 76 MSE 77 CYS 78 LEU 79 ASN 80 GLY 81 SER 82 LEU 83 VAL 84 ALA 85 THR 86 HIS 87 PRO 88 TYR 89 LEU 90 LEU 91 ILE 92 ASP 93 HIS 94 TYR 95 MSE 96 PRO 97 LYS 98 SER 99 LEU 100 ILE 101 THR 102 ARG 103 ASP 104 VAL 105 PRO 106 ALA 107 HIS 108 LEU 109 ALA 110 GLU 111 ASN 112 SER 113 GLY 114 LYS 115 PHE 116 SER 117 VAL 118 LEU 119 ARG 120 ASP 121 LEU 122 ILE 123 ASN 124 LEU 125 VAL 126 GLN 127 GLU 128 TYR 129 GLU 130 THR 131 GLU 132 THR 133 ALA 134 ILE 135 VAL 136 CYS 137 ARG 138 PRO 139 GLY 140 ARG 141 THR 142 MSE 143 ASP 144 LEU 145 LEU 146 GLU 147 ALA 148 LEU 149 LEU 150 LEU 151 GLY 152 ASN 153 LYS 154 VAL 155 HIS 156 ILE 157 LYS 158 ARG 159 TYR 160 ASP 161 GLY 162 HIS 163 SER 164 ILE 165 LYS 166 ASP 173 PHE 174 SER 175 CYS 176 THR 177 VAL 178 HIS 179 LEU 180 PHE 181 SER 182 SER 183 GLU 184 GLY 185 ILE 186 ASN 187 PHE 188 THR 189 LYS 190 TYR 191 PRO 192 ILE 193 LYS 194 SER 195 LYS 196 ALA 197 ARG 198 PHE 199 ASP 200 MSE 201 LEU 202 ILE 203 CYS 204 LEU 205 ASP 206 THR 207 THR 208 VAL 209 ASP 210 THR 211 SER 212 GLN 213 LYS 214 ASP 215 ILE 216 GLN 217 TYR 218 LEU 219 LEU 220 GLN 221 TYR 222 LYS 223 GLU 230 ARG 231 TYR 232 ALA 233 PRO 234 ILE 235 VAL 236 ARG 237 LEU 238 VAL 239 ALA 240 ILE 241 ASN 242 SER 243 ILE 244 ASP 245 HIS 246 CYS 247 ARG 248 LEU 249 PHE 250 PHE 251 GLY 252 LYS 253 LYS 254 PHE 255 ASP 256 LYS 257 ASN 258 SER 259 ARG 260 GLU 261 TYR 262 LEU 263 GLU 264 ASN 265 VAL 266 THR 267 ALA 268 ALA 269 MSE 270 VAL 271 ILE 272 LEU 273 ARG 274 ASP 275 ARG 276 LEU 277 GLY 278 THR 279 LEU 280 PRO 281 PRO 282 ASP 283 LEU 284 ARG 285 PRO 286 ILE 287 TYR 288 SER 289 GLN 290 LYS 291 LEU 292 HIS 293 TYR 294 LEU 295 VAL 296 GLU 297 TRP 298 LEU 299 GLU 300 ASN 301 PRO 302 THR 303 VAL 304 PRO 305 TRP 306 PRO 307 LEU 308 PRO 309 ASP 310 ILE 311 TYR 312 PRO 313 LEU 314 LYS 315 GLN 316 TYR 317 THR 318 SER 319 MSE 320 ASP 321 VAL 322 GLU 323 ARG 324 SER 325 LEU 326 LEU 327 THR 328
Unit 3	THR 27 SER 28 GLY 29 ASP 30 TYR 31 TRP 32 LEU 33 PRO 34 THR 35 THR 36 MSE 37 SER 38 LEU 39 TYR 40 GLN 41 LYS 42 GLU 43 LEU 44 THR 45 ASP 46 GLN 47 ILE 48 VAL 49 SER 50 LEU 51 HIS 52 TYR 53 SER 54 ASP 55 ILE 56 LEU 57 ARG 58 TYR 59 PHE 60 GLU 61 THR 62 SER 63 HIS 64 TYR 65 LYS 66 GLU 67 ASP 68 VAL 69 ILE 70 LEU 71 GLU 72 SER 73 MSE 74 LYS 75 THR 76 MSE 77 CYS 78 LEU 79 ASN 80 GLY 81 SER 82 LEU 83 VAL 84 ALA 85 THR 86 HIS 87 PRO 88 TYR 89 LEU 90 LEU 91 ILE 92 ASP 93 HIS 94 TYR 95 MSE 96 PRO 97 LYS 98 SER 99 LEU 100 ILE 101 THR 102 ARG 103 ASP 104 VAL 105 PRO 106 ALA 107 HIS 108 LEU 109 ALA 110 GLU 111 ASN 112 SER 113 GLY 114 LYS 115 PHE 116 SER 117 VAL 118 LEU 119 ARG 120 ASP 121 LEU 122 ILE 123 ASN 124 LEU 125 VAL 126 GLN 127 GLU 128 TYR 129 GLU 130 THR 131 GLU 132 THR 133 ALA 134 ILE 135 VAL 136 CYS 137 ARG 138 PRO 139 GLY 140 ARG 141 THR 142 MSE 143 ASP 144 LEU 145 LEU 146 GLU 147 ALA 148 LEU 149 LEU 150 LEU 151 GLY 152 ASN 153 LYS 154 VAL 155 HIS 156 ILE 157 LYS 158 ARG 159 TYR 160 ASP 161 GLY 162 HIS 163 SER 164 ILE 165 LYS 166 ASP 173 PHE 174 SER 175 CYS 176 THR 177 VAL 178 HIS 179 LEU 180 PHE 181 SER 182 SER 183 GLU 184 GLY 185 ILE 186 ASN 187 PHE 188 THR 189 LYS 190 TYR 191 PRO 192 ILE 193 LYS 194 SER 195 LYS 196 ALA 197 ARG 198 PHE 199 ASP 200 MSE 201 LEU 202 ILE 203 CYS 204 LEU 205 ASP 206 THR 207 THR 208 VAL 209 ASP 210 THR 211 SER 212 GLN 213 LYS 214 ASP 215 ILE 216 GLN 217 TYR 218 LEU 219 LEU 220 GLN 221 TYR 222 LYS 223 GLU 230 ARG 231 TYR 232 ALA 233 PRO 234 ILE 235 VAL 236 ARG 237 LEU 238 VAL 239 ALA 240 ILE 241 ASN 242 SER 243 ILE 244 ASP 245 HIS 246 CYS 247 ARG 248 LEU 249 PHE 250 PHE 251 GLY 252 LYS 253 LYS 254 PHE 255 ASP 256 LYS 257 ASN 258 SER 259 ARG 260 GLU 261 TYR 262 LEU 263 GLU 264 ASN 265 VAL 266 THR 267 ALA 268 ALA 269 MSE 270 VAL 271 ILE 272 LEU 273 ARG 274 ASP 275 ARG 276 LEU 277 GLY 278 THR 279 LEU 280 PRO 281 PRO 282 ASP 283 LEU 284 ARG 285 PRO 286 ILE 287 TYR 288 SER 289 GLN 290 LYS 291 LEU 292 HIS 293 TYR 294 LEU 295 VAL 296 GLU 297 TRP 298 LEU 299 GLU 300 ASN 301 PRO 302 THR 303 VAL 304 PRO 305 TRP 306 PRO 307 LEU 308 PRO 309 ASP 310 ILE 311 TYR 312 PRO 313 LEU 314 LYS 315 GLN 316 TYR 317 THR 318 SER 319 MSE 320 ASP 321 VAL 322 GLU 323 ARG 324 SER 325 LEU 326 LEU 327 THR 328
Unit 4	THR 27 SER 28 GLY 29 ASP 30 TYR 31 TRP 32 LEU 33 PRO 34 THR 35 THR 36 MSE 37 SER 38 LEU 39 TYR 40 GLN 41 LYS 42 GLU 43 LEU 44 THR 45 ASP 46 GLN 47 ILE 48 VAL 49 SER 50 LEU 51 HIS 52 TYR 53 SER 54 ASP 55 ILE 56 LEU 57 ARG 58 TYR 59 PHE 60 GLU 61 THR 62 SER 63 HIS 64 TYR 65 LYS 66 GLU 67 ASP 68 VAL 69 ILE 70 LEU 71 GLU 72 SER 73 MSE 74 LYS 75 THR 76 MSE 77 CYS 78 LEU 79 ASN 80 GLY 81 SER 82 LEU 83 VAL 84 ALA 85 THR 86 HIS 87 PRO 88 TYR 89 LEU 90 LEU 91 ILE 92 ASP 93 HIS 94 TYR 95 MSE 96 PRO 97 LYS 98 SER 99 LEU 100 ILE 101 THR 102 ARG 103 ASP 104 VAL 105 PRO 106 ALA 107 HIS 108 LEU 109 ALA 110 GLU 111 ASN 112 SER 113 GLY 114 LYS 115 PHE 116 SER 117 VAL 118 LEU 119 ARG 120 ASP 121 LEU 122 ILE 123 ASN 124 LEU 125 VAL 126 GLN 127 GLU 128 TYR 129 GLU 130 THR 131 GLU 132 THR 133 ALA 134 ILE 135 VAL 136 CYS 137 ARG 138 PRO 139 GLY 140 ARG 141 THR 142 MSE 143 ASP 144 LEU 145 LEU 146 GLU 147 ALA 148 LEU 149 LEU 150 LEU 151 GLY 152 ASN 153 LYS 154 VAL 155 HIS 156 ILE 157 LYS 158 ARG 159 TYR 160 ASP 161 GLY 162 HIS 163 SER 164 ILE 165 LYS 166 ASP 173 PHE 174 SER 175 CYS 176 THR 177 VAL 178 HIS 179 LEU 180 PHE 181 SER 182 SER 183 GLU 184 GLY 185 ILE 186 ASN 187 PHE 188 THR 189 LYS 190 TYR 191 PRO 192 ILE 193 LYS 194 SER 195 LYS 196 ALA 197 ARG 198 PHE 199 ASP 200 MSE 201 LEU 202 ILE 203 CYS 204 LEU 205 ASP 206 THR 207 THR 208 VAL 209 ASP 210 THR 211 SER 212 GLN 213 LYS 214 ASP 215 ILE 216 GLN 217 TYR 218 LEU 219 LEU 220 GLN 221 TYR 222 LYS 223 GLU 230 ARG 231 TYR 232 ALA 233 PRO 234 ILE 235 VAL 236 ARG 237 LEU 238 VAL 239 ALA 240 ILE 241 ASN 242 SER 243 ILE 244 ASP 245 HIS 246 CYS 247 ARG 248 LEU 249 PHE 250 PHE 251 GLY 252 LYS 253 LYS 254 PHE 255 ASP 256 LYS 257 ASN 258 SER 259 ARG 260 GLU 261 TYR 262 LEU 263 GLU 264 ASN 265 VAL 266 THR 267 ALA 268 ALA 269 MSE 270 VAL 271 ILE 272 LEU 273 ARG 274 ASP 275 ARG 276 LEU 277 GLY 278 THR 279 LEU 280 PRO 281 PRO 282 ASP 283 LEU 284 ARG 285 PRO 286 ILE 287 TYR 288 SER 289 GLN 290 LYS 291 LEU 292 HIS 293 TYR 294 LEU 295 VAL 296 GLU 297 TRP 298 LEU 299 GLU 300 ASN 301 PRO 302 THR 303 VAL 304 PRO 305 TRP 306 PRO 307 LEU 308 PRO 309 ASP 310 ILE 311 TYR 312 PRO 313 LEU 314 LYS 315 GLN 316 TYR 317 THR 318 SER 319 MSE 320 ASP 321 VAL 322 GLU 323 ARG 324 SER 325 LEU 326 LEU 327 THR 328