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Sequence, Chains, Asymmetric and Biological Units

Title S-ADENOSYL HOMOCYSTEINE HYDROLASE (SAHH) FROM TRYPANOSOMA BR
Keywords NAD CO-FACTOR COMPLEX, STRUCTURAL GENOMICS, SGC STOCKHOLM, S GENOMICS CONSORTIUM, SGC, HYDROLASE, NAD, ONE-CARBON METABO
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   3H9U     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ADENOSYLHOMOCYSTEINASE  A 430 3324 0
2  Protein   ADENOSYLHOMOCYSTEINASE  B 430 3336 0
3  Protein   ADENOSYLHOMOCYSTEINASE  C 435 3369 0
4  Protein   ADENOSYLHOMOCYSTEINASE  D 434 3363 0
5  Ligand   ADENOSYLHOMOCYSTEINASE  A 2 0 54
6  Ligand   ADENOSYLHOMOCYSTEINASE  B 2 0 54
7  Ligand   ADENOSYLHOMOCYSTEINASE  C 3 0 60
8  Ligand   ADENOSYLHOMOCYSTEINASE  D 3 0 67
9 Water     759 0 759
total       2498 13392 994
Proteins
Unit 1 TYR4 LYS5 VAL6 ARG7 ASP8 ILE9 SER10 LEU11 ALA12 GLU13 TRP14 GLY15 ARG16 ARG17 GLU18 LEU19 GLU20 LEU21 ALA22 GLU23 ASN24 GLU25 MET26 PRO27 GLY28 LEU29 MET30 GLU31 LEU32 ARG33 ARG34 GLU35 TYR36 GLY37 PRO38 SER39 LYS40 PRO41 LEU42 LYS43 GLY44 ALA45 LYS46 ILE47 ALA48 GLY49 CYS50 LEU51 HIS52 MET53 THR54 MET55 GLN56 THR57 ALA58 VAL59 LEU60 ILE61 GLU62 THR63 LEU64 VAL65 GLU66 LEU67 GLY68 ALA69 GLU70 VAL71 ARG72 TRP73 ALA74 SER75 CYS76 ASN77 ILE78 PHE79 SER80 THR81 GLN82 ASP83 HIS84 ALA85 ALA86 ALA87 ALA88 ILE89 ALA90 LYS91 ARG92 GLY93 ILE94 PRO95 VAL96 PHE97 ALA98 TRP99 LYS100 GLY101 GLU102 THR103 GLU104 GLU105 GLU106 TYR107 MET108 TRP109 CYS110 MET111 LYS112 GLN113 THR114 LEU115 LYS116 GLY117 PHE118 SER119 GLY120 ASP121 GLY122 TYR123 PRO124 ASN125 MET126 LEU127 LEU128 ASP129 ASP130 GLY131 GLY132 ASP133 LEU134 THR135 ASN136 TYR137 VAL138 LEU139 ASP140 GLU141 CYS142 GLU144 LEU145 ASP146 GLY147 LYS148 ILE149 TYR150 GLY151 VAL152 SER153 GLU154 GLU155 THR156 THR157 THR158 GLY159 VAL160 LYS161 ASN162 LEU163 TYR164 LYS165 ARG166 LEU167 GLN168 ARG169 GLY170 LYS171 LEU172 THR173 ILE174 PRO175 ALA176 MET177 ASN178 VAL179 ASN180 ASP181 SER182 VAL183 THR184 LYS185 SER186 LYS187 PHE188 ASP189 ASN190 LEU191 TYR192 GLY193 CYS194 ARG195 GLU196 SER197 LEU198 VAL199 ASP200 GLY201 ILE202 LYS203 ARG204 ALA205 THR206 ASP207 VAL208 MET209 ILE210 ALA211 GLY212 LYS213 THR214 ALA215 CYS216 VAL217 CYS218 GLY219 TYR220 GLY221 ASP222 VAL223 GLY224 LYS225 GLY226 CYS227 ALA228 ALA229 ALA230 LEU231 ARG232 GLY233 PHE234 GLY235 ALA236 ARG237 VAL238 VAL239 VAL240 THR241 GLU242 VAL243 ASP244 PRO245 ILE246 ASN247 ALA248 LEU249 GLN250 ALA251 ALA252 MET253 GLU254 GLY255 TYR256 GLN257 VAL258 LEU259 LEU260 VAL261 GLU262 ASP263 VAL264 VAL265 GLU266 GLU267 ALA268 HIS269 ILE270 PHE271 VAL272 THR273 THR274 THR275 GLY276 ASN277 ASP278 ASP279 ILE280 ILE281 THR282 SER283 GLU284 HIS285 PHE286 PRO287 ARG288 MET289 ARG290 ASP291 ASP292 ALA293 ILE294 VAL295 CYS296 ASN297 ILE298 GLY299 HIS300 PHE301 ASP302 THR303 GLU304 ILE305 GLN306 VAL307 ALA308 TRP309 LEU310 LYS311 ALA312 ASN313 ALA314 LYS315 GLU316 ARG317 VAL318 GLU319 VAL320 LYS321 PRO322 GLN323 VAL324 ASP325 ARG326 TYR327 THR328 MET329 ALA330 ASN331 GLY332 ARG333 HIS334 ILE335 ILE336 LEU337 LEU338 ALA339 GLU340 GLY341 ARG342 LEU343 VAL344 ASN345 LEU346 GLY347 CYS348 ALA349 SER350 GLY351 HIS352 PRO353 SER354 PHE355 VAL356 MET357 SER358 ASN359 SER360 PHE361 CYS362 ASN363 GLN364 VAL365 LEU366 ALA367 GLN368 ILE369 GLU370 LEU371 TRP372 THR373 ASN374 ARG375 ASP376 THR377 GLY378 LYS379 TYR380 PRO381 ARG382 ALA386 GLN387 VAL388 TYR389 PHE390 LEU391 PRO392 LYS393 LYS394 LEU395 ASP396 GLU397 LYS398 VAL399 ALA400 ALA401 LEU402 HIS403 LEU404 GLY405 LYS406 LEU407 GLY408 ALA409 LYS410 LEU411 THR412 LYS413 LEU414 THR415 PRO416 LYS417 GLN418 ALA419 GLU420 TYR421 ILE422 ASN423 CYS424 PRO425 VAL426 ASP427 GLY428 PRO429 PHE430 LYS431 PRO432 ASP433 HIS434 TYR435 ARG436 TYR437
Unit 2 TYR4 LYS5 VAL6 ARG7 ASP8 ILE9 SER10 LEU11 ALA12 GLU13 TRP14 GLY15 ARG16 ARG17 GLU18 LEU19 GLU20 LEU21 ALA22 GLU23 ASN24 GLU25 MET26 PRO27 GLY28 LEU29 MET30 GLU31 LEU32 ARG33 ARG34 GLU35 TYR36 GLY37 PRO38 SER39 LYS40 PRO41 LEU42 LYS43 GLY44 ALA45 LYS46 ILE47 ALA48 GLY49 CYS50 LEU51 HIS52 MET53 THR54 MET55 GLN56 THR57 ALA58 VAL59 LEU60 ILE61 GLU62 THR63 LEU64 VAL65 GLU66 LEU67 GLY68 ALA69 GLU70 VAL71 ARG72 TRP73 ALA74 SER75 CYS76 ASN77 ILE78 PHE79 SER80 THR81 GLN82 ASP83 HIS84 ALA85 ALA86 ALA87 ALA88 ILE89 ALA90 LYS91 ARG92 GLY93 ILE94 PRO95 VAL96 PHE97 ALA98 TRP99 LYS100 GLY101 GLU102 THR103 GLU104 GLU105 GLU106 TYR107 MET108 TRP109 CYS110 MET111 LYS112 GLN113 THR114 LEU115 LYS116 GLY117 PHE118 GLY122 TYR123 PRO124 ASN125 MET126 LEU127 LEU128 ASP129 ASP130 GLY131 GLY132 ASP133 LEU134 THR135 ASN136 TYR137 VAL138 LEU139 ASP140 GLU141 CYS142 GLU144 LEU145 ASP146 GLY147 LYS148 ILE149 TYR150 GLY151 VAL152 SER153 GLU154 GLU155 THR156 THR157 THR158 GLY159 VAL160 LYS161 ASN162 LEU163 TYR164 LYS165 ARG166 LEU167 GLN168 ARG169 GLY170 LYS171 LEU172 THR173 ILE174 PRO175 ALA176 MET177 ASN178 VAL179 ASN180 ASP181 SER182 VAL183 THR184 LYS185 SER186 LYS187 PHE188 ASP189 ASN190 LEU191 TYR192 GLY193 CYS194 ARG195 GLU196 SER197 LEU198 VAL199 ASP200 GLY201 ILE202 LYS203 ARG204 ALA205 THR206 ASP207 VAL208 MET209 ILE210 ALA211 GLY212 LYS213 THR214 ALA215 CYS216 VAL217 CYS218 GLY219 TYR220 GLY221 ASP222 VAL223 GLY224 LYS225 GLY226 CYS227 ALA228 ALA229 ALA230 LEU231 ARG232 GLY233 PHE234 GLY235 ALA236 ARG237 VAL238 VAL239 VAL240 THR241 GLU242 VAL243 ASP244 PRO245 ILE246 ASN247 ALA248 LEU249 GLN250 ALA251 ALA252 MET253 GLU254 GLY255 TYR256 GLN257 VAL258 LEU259 LEU260 VAL261 GLU262 ASP263 VAL264 VAL265 GLU266 GLU267 ALA268 HIS269 ILE270 PHE271 VAL272 THR273 THR274 THR275 GLY276 ASN277 ASP278 ASP279 ILE280 ILE281 THR282 SER283 GLU284 HIS285 PHE286 PRO287 ARG288 MET289 ARG290 ASP291 ASP292 ALA293 ILE294 VAL295 CYS296 ASN297 ILE298 GLY299 HIS300 PHE301 ASP302 THR303 GLU304 ILE305 GLN306 VAL307 ALA308 TRP309 LEU310 LYS311 ALA312 ASN313 ALA314 LYS315 GLU316 ARG317 VAL318 GLU319 VAL320 LYS321 PRO322 GLN323 VAL324 ASP325 ARG326 TYR327 THR328 MET329 ALA330 ASN331 GLY332 ARG333 HIS334 ILE335 ILE336 LEU337 LEU338 ALA339 GLU340 GLY341 ARG342 LEU343 VAL344 ASN345 LEU346 GLY347 CYS348 ALA349 SER350 GLY351 HIS352 PRO353 SER354 PHE355 VAL356 MET357 SER358 ASN359 SER360 PHE361 CYS362 ASN363 GLN364 VAL365 LEU366 ALA367 GLN368 ILE369 GLU370 LEU371 TRP372 THR373 ASN374 ARG375 ASP376 THR377 GLY378 LYS379 TYR380 PRO381 ARG382 GLY383 ALA384 LYS385 ALA386 GLN387 VAL388 TYR389 PHE390 LEU391 PRO392 LYS393 LYS394 LEU395 ASP396 GLU397 LYS398 VAL399 ALA400 ALA401 LEU402 HIS403 LEU404 GLY405 LYS406 LEU407 GLY408 ALA409 LYS410 LEU411 THR412 LYS413 LEU414 THR415 PRO416 LYS417 GLN418 ALA419 GLU420 TYR421 ILE422 ASN423 CYS424 PRO425 VAL426 ASP427 GLY428 PRO429 PHE430 LYS431 PRO432 ASP433 HIS434 TYR435 ARG436 TYR437
Unit 3 SER-2 MET-1 TYR4 LYS5 VAL6 ARG7 ASP8 ILE9 SER10 LEU11 ALA12 GLU13 TRP14 GLY15 ARG16 ARG17 GLU18 LEU19 GLU20 LEU21 ALA22 GLU23 ASN24 GLU25 MET26 PRO27 GLY28 LEU29 MET30 GLU31 LEU32 ARG33 ARG34 GLU35 TYR36 GLY37 PRO38 SER39 LYS40 PRO41 LEU42 LYS43 GLY44 ALA45 LYS46 ILE47 ALA48 GLY49 CYS50 LEU51 HIS52 MET53 THR54 MET55 GLN56 THR57 ALA58 VAL59 LEU60 ILE61 GLU62 THR63 LEU64 VAL65 GLU66 LEU67 GLY68 ALA69 GLU70 VAL71 ARG72 TRP73 ALA74 SER75 CYS76 ASN77 ILE78 PHE79 SER80 THR81 GLN82 ASP83 HIS84 ALA85 ALA86 ALA87 ALA88 ILE89 ALA90 LYS91 ARG92 GLY93 ILE94 PRO95 VAL96 PHE97 ALA98 TRP99 LYS100 GLY101 GLU102 THR103 GLU104 GLU105 GLU106 TYR107 MET108 TRP109 CYS110 MET111 LYS112 GLN113 THR114 LEU115 LYS116 GLY117 PHE118 SER119 GLY120 ASP121 GLY122 TYR123 PRO124 ASN125 MET126 LEU127 LEU128 ASP129 ASP130 GLY131 GLY132 ASP133 LEU134 THR135 ASN136 TYR137 VAL138 LEU139 ASP140 GLU141 CYS142 GLU144 LEU145 ASP146 GLY147 LYS148 ILE149 TYR150 GLY151 VAL152 SER153 GLU154 GLU155 THR156 THR157 THR158 GLY159 VAL160 LYS161 ASN162 LEU163 TYR164 LYS165 ARG166 LEU167 GLN168 ARG169 GLY170 LYS171 LEU172 THR173 ILE174 PRO175 ALA176 MET177 ASN178 VAL179 ASN180 ASP181 SER182 VAL183 THR184 LYS185 SER186 LYS187 PHE188 ASP189 ASN190 LEU191 TYR192 GLY193 CYS194 ARG195 GLU196 SER197 LEU198 VAL199 ASP200 GLY201 ILE202 LYS203 ARG204 ALA205 THR206 ASP207 VAL208 MET209 ILE210 ALA211 GLY212 LYS213 THR214 ALA215 CYS216 VAL217 CYS218 GLY219 TYR220 GLY221 ASP222 VAL223 GLY224 LYS225 GLY226 CYS227 ALA228 ALA229 ALA230 LEU231 ARG232 GLY233 PHE234 GLY235 ALA236 ARG237 VAL238 VAL239 VAL240 THR241 GLU242 VAL243 ASP244 PRO245 ILE246 ASN247 ALA248 LEU249 GLN250 ALA251 ALA252 MET253 GLU254 GLY255 TYR256 GLN257 VAL258 LEU259 LEU260 VAL261 GLU262 ASP263 VAL264 VAL265 GLU266 GLU267 ALA268 HIS269 ILE270 PHE271 VAL272 THR273 THR274 THR275 GLY276 ASN277 ASP278 ASP279 ILE280 ILE281 THR282 SER283 GLU284 HIS285 PHE286 PRO287 ARG288 MET289 ARG290 ASP291 ASP292 ALA293 ILE294 VAL295 CYS296 ASN297 ILE298 GLY299 HIS300 PHE301 ASP302 THR303 GLU304 ILE305 GLN306 VAL307 ALA308 TRP309 LEU310 LYS311 ALA312 ASN313 ALA314 LYS315 GLU316 ARG317 VAL318 GLU319 VAL320 LYS321 PRO322 GLN323 VAL324 ASP325 ARG326 TYR327 THR328 MET329 ALA330 ASN331 GLY332 ARG333 HIS334 ILE335 ILE336 LEU337 LEU338 ALA339 GLU340 GLY341 ARG342 LEU343 VAL344 ASN345 LEU346 GLY347 CYS348 ALA349 SER350 GLY351 HIS352 PRO353 SER354 PHE355 VAL356 MET357 SER358 ASN359 SER360 PHE361 CYS362 ASN363 GLN364 VAL365 LEU366 ALA367 GLN368 ILE369 GLU370 LEU371 TRP372 THR373 ASN374 ARG375 ASP376 THR377 GLY378 LYS379 TYR380 PRO381 ARG382 GLY383 ALA384 LYS385 ALA386 GLN387 VAL388 TYR389 PHE390 LEU391 PRO392 LYS393 LYS394 LEU395 ASP396 GLU397 LYS398 VAL399 ALA400 ALA401 LEU402 HIS403 LEU404 GLY405 LYS406 LEU407 GLY408 ALA409 LYS410 LEU411 THR412 LYS413 LEU414 THR415 PRO416 LYS417 GLN418 ALA419 GLU420 TYR421 ILE422 ASN423 CYS424 PRO425 VAL426 ASP427 GLY428 PRO429 PHE430 LYS431 PRO432 ASP433 HIS434 TYR435 ARG436 TYR437
Unit 4 MET-1 TYR4 LYS5 VAL6 ARG7 ASP8 ILE9 SER10 LEU11 ALA12 GLU13 TRP14 GLY15 ARG16 ARG17 GLU18 LEU19 GLU20 LEU21 ALA22 GLU23 ASN24 GLU25 MET26 PRO27 GLY28 LEU29 MET30 GLU31 LEU32 ARG33 ARG34 GLU35 TYR36 GLY37 PRO38 SER39 LYS40 PRO41 LEU42 LYS43 GLY44 ALA45 LYS46 ILE47 ALA48 GLY49 CYS50 LEU51 HIS52 MET53 THR54 MET55 GLN56 THR57 ALA58 VAL59 LEU60 ILE61 GLU62 THR63 LEU64 VAL65 GLU66 LEU67 GLY68 ALA69 GLU70 VAL71 ARG72 TRP73 ALA74 SER75 CYS76 ASN77 ILE78 PHE79 SER80 THR81 GLN82 ASP83 HIS84 ALA85 ALA86 ALA87 ALA88 ILE89 ALA90 LYS91 ARG92 GLY93 ILE94 PRO95 VAL96 PHE97 ALA98 TRP99 LYS100 GLY101 GLU102 THR103 GLU104 GLU105 GLU106 TYR107 MET108 TRP109 CYS110 MET111 LYS112 GLN113 THR114 LEU115 LYS116 GLY117 PHE118 SER119 GLY120 ASP121 GLY122 TYR123 PRO124 ASN125 MET126 LEU127 LEU128 ASP129 ASP130 GLY131 GLY132 ASP133 LEU134 THR135 ASN136 TYR137 VAL138 LEU139 ASP140 GLU141 CYS142 GLU144 LEU145 ASP146 GLY147 LYS148 ILE149 TYR150 GLY151 VAL152 SER153 GLU154 GLU155 THR156 THR157 THR158 GLY159 VAL160 LYS161 ASN162 LEU163 TYR164 LYS165 ARG166 LEU167 GLN168 ARG169 GLY170 LYS171 LEU172 THR173 ILE174 PRO175 ALA176 MET177 ASN178 VAL179 ASN180 ASP181 SER182 VAL183 THR184 LYS185 SER186 LYS187 PHE188 ASP189 ASN190 LEU191 TYR192 GLY193 CYS194 ARG195 GLU196 SER197 LEU198 VAL199 ASP200 GLY201 ILE202 LYS203 ARG204 ALA205 THR206 ASP207 VAL208 MET209 ILE210 ALA211 GLY212 LYS213 THR214 ALA215 CYS216 VAL217 CYS218 GLY219 TYR220 GLY221 ASP222 VAL223 GLY224 LYS225 GLY226 CYS227 ALA228 ALA229 ALA230 LEU231 ARG232 GLY233 PHE234 GLY235 ALA236 ARG237 VAL238 VAL239 VAL240 THR241 GLU242 VAL243 ASP244 PRO245 ILE246 ASN247 ALA248 LEU249 GLN250 ALA251 ALA252 MET253 GLU254 GLY255 TYR256 GLN257 VAL258 LEU259 LEU260 VAL261 GLU262 ASP263 VAL264 VAL265 GLU266 GLU267 ALA268 HIS269 ILE270 PHE271 VAL272 THR273 THR274 THR275 GLY276 ASN277 ASP278 ASP279 ILE280 ILE281 THR282 SER283 GLU284 HIS285 PHE286 PRO287 ARG288 MET289 ARG290 ASP291 ASP292 ALA293 ILE294 VAL295 CYS296 ASN297 ILE298 GLY299 HIS300 PHE301 ASP302 THR303 GLU304 ILE305 GLN306 VAL307 ALA308 TRP309 LEU310 LYS311 ALA312 ASN313 ALA314 LYS315 GLU316 ARG317 VAL318 GLU319 VAL320 LYS321 PRO322 GLN323 VAL324 ASP325 ARG326 TYR327 THR328 MET329 ALA330 ASN331 GLY332 ARG333 HIS334 ILE335 ILE336 LEU337 LEU338 ALA339 GLU340 GLY341 ARG342 LEU343 VAL344 ASN345 LEU346 GLY347 CYS348 ALA349 SER350 GLY351 HIS352 PRO353 SER354 PHE355 VAL356 MET357 SER358 ASN359 SER360 PHE361 CYS362 ASN363 GLN364 VAL365 LEU366 ALA367 GLN368 ILE369 GLU370 LEU371 TRP372 THR373 ASN374 ARG375 ASP376 THR377 GLY378 LYS379 TYR380 PRO381 ARG382 GLY383 ALA384 LYS385 ALA386 GLN387 VAL388 TYR389 PHE390 LEU391 PRO392 LYS393 LYS394 LEU395 ASP396 GLU397 LYS398 VAL399 ALA400 ALA401 LEU402 HIS403 LEU404 GLY405 LYS406 LEU407 GLY408 ALA409 LYS410 LEU411 THR412 LYS413 LEU414 THR415 PRO416 LYS417 GLN418 ALA419 GLU420 TYR421 ILE422 ASN423 CYS424 PRO425 VAL426 ASP427 GLY428 PRO429 PHE430 LYS431 PRO432 ASP433 HIS434 TYR435 ARG436 TYR437
Ligands
Unit 5 NAD438 ADN439
Unit 6 NAD1 ADN438
Unit 7 GOL1 NAD2 ADN438
Unit 8 PG41 NAD3 ADN438
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany